RNA–Protein interactions for RNA: ENST00000225742.13

SMARCD2-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2, humanhuman

TSL 1 (best) BASIC

Gene SMARCD2, Length 1,800 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD2-201ENST00000225742 TMEM135Q86UB9 458 aa22.52■■□□□ 1.2
SMARCD2-201ENST00000225742 PPP4R1Q8TF05 950 aa22.52■■□□□ 1.2
SMARCD2-201ENST00000225742 PPP1R13LQ8WUF5 828 aa22.52■■□□□ 1.2
SMARCD2-201ENST00000225742 IRGQQ8WZA9 623 aa22.52■■□□□ 1.2
SMARCD2-201ENST00000225742 RILPQ96NA2 401 aa22.52■■□□□ 1.2
SMARCD2-201ENST00000225742 SMOQ99835 787 aa22.52■■□□□ 1.2
SMARCD2-201ENST00000225742 ARMCX1Q9P291 453 aa22.52■■□□□ 1.2
SMARCD2-201ENST00000225742 ZNF638Q14966 1978 aaKnown RBP22.51■■□□□ 1.19
SMARCD2-201ENST00000225742 F5H423 210 aaPredicted RBP22.51■■□□□ 1.19
SMARCD2-201ENST00000225742 KLHL2O95198 593 aa22.51■■□□□ 1.19
SMARCD2-201ENST00000225742 LTFP02788 710 aa22.51■■□□□ 1.19
SMARCD2-201ENST00000225742 MPOP05164 745 aa22.51■■□□□ 1.19
SMARCD2-201ENST00000225742 TYK2P29597 1187 aa22.51■■□□□ 1.19
SMARCD2-201ENST00000225742 SERPINB6P35237 376 aa22.51■■□□□ 1.19
SMARCD2-201ENST00000225742 PTDSS1P48651 473 aaKnown RBP22.51■■□□□ 1.19
SMARCD2-201ENST00000225742 SERPINB8P50452 374 aa22.51■■□□□ 1.19
SMARCD2-201ENST00000225742 GALNT2Q10471 571 aa22.51■■□□□ 1.19
SMARCD2-201ENST00000225742 NAA25Q14CX7 972 aa22.51■■□□□ 1.19
SMARCD2-201ENST00000225742 BSPRYQ5W0U4 402 aa22.51■■□□□ 1.19
SMARCD2-201ENST00000225742 KCTD11Q693B1 232 aa22.51■■□□□ 1.19
SMARCD2-201ENST00000225742 TREML1Q86YW5 311 aa22.51■■□□□ 1.19
SMARCD2-201ENST00000225742 SERBP1Q8NC51 408 aaKnown RBP eCLIP22.51■■□□□ 1.19
SMARCD2-201ENST00000225742 RBBP8Q99708 897 aa22.51■■□□□ 1.19
SMARCD2-201ENST00000225742 SYT17Q9BSW7 474 aa22.51■■□□□ 1.19
SMARCD2-201ENST00000225742 C20orf27Q9GZN8 174 aa22.51■■□□□ 1.19
SMARCD2-201ENST00000225742 GBA3Q9H227 469 aa22.51■■□□□ 1.19
SMARCD2-201ENST00000225742 ZNF395Q9H8N7 513 aaPredicted RBP22.51■■□□□ 1.19
SMARCD2-201ENST00000225742 CHST12Q9NRB3 414 aa22.51■■□□□ 1.19
SMARCD2-201ENST00000225742 DNAJC28Q9NX36 388 aa22.51■■□□□ 1.19
SMARCD2-201ENST00000225742 VANGL2Q9ULK5 521 aa22.51■■□□□ 1.19
SMARCD2-201ENST00000225742 MYO18AQ92614 2054 aaKnown RBP22.51■■□□□ 1.19
SMARCD2-201ENST00000225742 YJEFN3A6XGL0 299 aa22.5■■□□□ 1.19
SMARCD2-201ENST00000225742 ENO1P06733 434 aaKnown RBP22.5■■□□□ 1.19
SMARCD2-201ENST00000225742 AOC1P19801 751 aa22.5■■□□□ 1.19
SMARCD2-201ENST00000225742 RPL9P32969 192 aaKnown RBP22.5■■□□□ 1.19
SMARCD2-201ENST00000225742 RPL10AP62906 217 aaKnown RBP22.5■■□□□ 1.19
SMARCD2-201ENST00000225742 ZNF33AQ06730 810 aa22.5■■□□□ 1.19
SMARCD2-201ENST00000225742 PCLAFQ15004 111 aa22.5■■□□□ 1.19
SMARCD2-201ENST00000225742 ZRSR2Q15696 482 aaKnown RBP22.5■■□□□ 1.19
SMARCD2-201ENST00000225742 C16orf46Q6P387 395 aa22.5■■□□□ 1.19
SMARCD2-201ENST00000225742 EPAS1Q99814 870 aa22.5■■□□□ 1.19
SMARCD2-201ENST00000225742 CEP41Q9BYV8 373 aa22.5■■□□□ 1.19
SMARCD2-201ENST00000225742 PSAT1Q9Y617 370 aa22.5■■□□□ 1.19
SMARCD2-201ENST00000225742 FAM72CH0Y354 149 aa22.5■■□□□ 1.19
SMARCD2-201ENST00000225742 M0QZ92 97 aa22.5■■□□□ 1.19
SMARCD2-201ENST00000225742 KPNA6O60684 536 aa22.5■■□□□ 1.19
SMARCD2-201ENST00000225742 PSMG1O95456 288 aa22.5■■□□□ 1.19
SMARCD2-201ENST00000225742 KITP10721 976 aa22.5■■□□□ 1.19
SMARCD2-201ENST00000225742 ALOX15P16050 662 aaPredicted RBP22.5■■□□□ 1.19
SMARCD2-201ENST00000225742 CYP2B6P20813 491 aa22.5■■□□□ 1.19
SMARCD2-201ENST00000225742 ATP6V1C1P21283 382 aa22.5■■□□□ 1.19
SMARCD2-201ENST00000225742 LIMK2P53671 638 aa22.5■■□□□ 1.19
SMARCD2-201ENST00000225742 MRPS6P82932 125 aaKnown RBP22.5■■□□□ 1.19
SMARCD2-201ENST00000225742 KPNB1Q14974 876 aaKnown RBP22.5■■□□□ 1.19
SMARCD2-201ENST00000225742 FAM72AQ5TYM5 149 aa22.5■■□□□ 1.19
SMARCD2-201ENST00000225742 FAM72DQ6L9T8 149 aa22.5■■□□□ 1.19
SMARCD2-201ENST00000225742 NET1Q7Z628 596 aaPredicted RBP22.5■■□□□ 1.19
SMARCD2-201ENST00000225742 FAM72BQ86X60 149 aa22.5■■□□□ 1.19
SMARCD2-201ENST00000225742 SCML4Q8N228 414 aa22.5■■□□□ 1.19
SMARCD2-201ENST00000225742 RNF169Q8NCN4 708 aa22.5■■□□□ 1.19
SMARCD2-201ENST00000225742 OR52K1Q8NGK4 314 aa22.5■■□□□ 1.19
SMARCD2-201ENST00000225742 STMN2Q93045 179 aa22.5■■□□□ 1.19
SMARCD2-201ENST00000225742 SMARCD1Q96GM5 515 aa22.5■■□□□ 1.19
SMARCD2-201ENST00000225742 GORASP1Q9BQQ3 440 aa22.5■■□□□ 1.19
SMARCD2-201ENST00000225742 FLRT1Q9NZU1 646 aa22.5■■□□□ 1.19
SMARCD2-201ENST00000225742 DNAJC16Q9Y2G8 782 aa22.5■■□□□ 1.19
SMARCD2-201ENST00000225742 THP07101 528 aa22.49■■□□□ 1.19
SMARCD2-201ENST00000225742 ERVK-10P10266 1014 aa22.49■■□□□ 1.19
SMARCD2-201ENST00000225742 PCSK1P29120 753 aa22.49■■□□□ 1.19
SMARCD2-201ENST00000225742 VHLP40337 213 aa22.49■■□□□ 1.19
SMARCD2-201ENST00000225742 MLH1P40692 756 aa22.49■■□□□ 1.19
SMARCD2-201ENST00000225742 HADHAP40939 763 aa22.49■■□□□ 1.19
SMARCD2-201ENST00000225742 HARS2P49590 506 aaKnown RBP22.49■■□□□ 1.19
SMARCD2-201ENST00000225742 CXCR3P49682 368 aa22.49■■□□□ 1.19
SMARCD2-201ENST00000225742 CSE1LP55060 971 aaKnown RBP22.49■■□□□ 1.19
SMARCD2-201ENST00000225742 COG7P83436 770 aa22.49■■□□□ 1.19
SMARCD2-201ENST00000225742 CCDC6Q16204 474 aa22.49■■□□□ 1.19
SMARCD2-201ENST00000225742 ACSBG2Q5FVE4 666 aa22.49■■□□□ 1.19
SMARCD2-201ENST00000225742 C6orf163Q5TEZ5 329 aa22.49■■□□□ 1.19
SMARCD2-201ENST00000225742 ZCCHC23Q6ZST2 131 aa22.49■■□□□ 1.19
SMARCD2-201ENST00000225742 C2orf69Q8N8R5 385 aa22.49■■□□□ 1.19
SMARCD2-201ENST00000225742 ZNF669Q96BR6 464 aaPredicted RBP22.49■■□□□ 1.19
SMARCD2-201ENST00000225742 ZFP42Q96MM3 310 aa22.49■■□□□ 1.19
SMARCD2-201ENST00000225742 FCRL3Q96P31 734 aaPredicted RBP22.49■■□□□ 1.19
SMARCD2-201ENST00000225742 TRIM62Q9BVG3 475 aa22.49■■□□□ 1.19
SMARCD2-201ENST00000225742 SLC17A6Q9P2U8 582 aa22.49■■□□□ 1.19
SMARCD2-201ENST00000225742 COPG2Q9UBF2 871 aa22.49■■□□□ 1.19
SMARCD2-201ENST00000225742 MARCOQ9UEW3 520 aaPredicted RBP22.49■■□□□ 1.19
SMARCD2-201ENST00000225742 TRPV2Q9Y5S1 764 aa22.49■■□□□ 1.19
SMARCD2-201ENST00000225742 H0Y3Z8 333 aa22.48■■□□□ 1.19
SMARCD2-201ENST00000225742 KCNK1O00180 336 aa22.48■■□□□ 1.19
SMARCD2-201ENST00000225742 CIB2O75838 187 aa22.48■■□□□ 1.19
SMARCD2-201ENST00000225742 PRKCGP05129 697 aa22.48■■□□□ 1.19
SMARCD2-201ENST00000225742 NCAM1P13591 858 aa22.48■■□□□ 1.19
SMARCD2-201ENST00000225742 ACADSP16219 412 aa22.48■■□□□ 1.19
SMARCD2-201ENST00000225742 IRX4P78413 519 aa22.48■■□□□ 1.19
SMARCD2-201ENST00000225742 SLC34A1Q06495 639 aa22.48■■□□□ 1.19
SMARCD2-201ENST00000225742 ANKRD20A4Q4UJ75 823 aa22.48■■□□□ 1.19
SMARCD2-201ENST00000225742 ZMIZ2Q8NF64 920 aa22.48■■□□□ 1.19
SMARCD2-201ENST00000225742 SREK1Q8WXA9 508 aaKnown RBP22.48■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms