RNA–Protein interactions for RNA: ENST00000225696.8

NUP88-201, Transcript of nucleoporin 88, humanhuman

TSL 5

Gene NUP88, Length 2,194 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-201ENST00000225696 C6orf52Q5T4I8 152 aa12.7□□□□□ -0.38
NUP88-201ENST00000225696 LRRC8BQ6P9F7 803 aa12.7□□□□□ -0.38
NUP88-201ENST00000225696 IYDQ6PHW0 289 aa12.7□□□□□ -0.38
NUP88-201ENST00000225696 KLHDC10Q6PID8 442 aa12.7□□□□□ -0.38
NUP88-201ENST00000225696 SNX32Q86XE0 403 aa12.7□□□□□ -0.38
NUP88-201ENST00000225696 C7orf31Q8N865 590 aa12.7□□□□□ -0.38
NUP88-201ENST00000225696 DNERQ8NFT8 737 aa12.7□□□□□ -0.38
NUP88-201ENST00000225696 SLC35F5Q8WV83 523 aa12.7□□□□□ -0.38
NUP88-201ENST00000225696 ATP2A3Q93084 1043 aa12.7□□□□□ -0.38
NUP88-201ENST00000225696 HIC2Q96JB3 615 aa12.7□□□□□ -0.38
NUP88-201ENST00000225696 MARK4Q96L34 752 aa12.7□□□□□ -0.38
NUP88-201ENST00000225696 CNBD2Q96M20 576 aa12.7□□□□□ -0.38
NUP88-201ENST00000225696 CDRT15Q96T59 188 aa12.7□□□□□ -0.38
NUP88-201ENST00000225696 TBCBQ99426 244 aa12.7□□□□□ -0.38
NUP88-201ENST00000225696 NT5C1AQ9BXI3 368 aa12.7□□□□□ -0.38
NUP88-201ENST00000225696 SLC4A5Q9BY07 1137 aa12.7□□□□□ -0.38
NUP88-201ENST00000225696 GRIP2Q9C0E4 1043 aa12.7□□□□□ -0.38
NUP88-201ENST00000225696 DPEP3Q9H4B8 488 aa12.7□□□□□ -0.38
NUP88-201ENST00000225696 COPS7BQ9H9Q2 264 aaPredicted RBP12.7□□□□□ -0.38
NUP88-201ENST00000225696 CYP3A43Q9HB55 503 aa12.7□□□□□ -0.38
NUP88-201ENST00000225696 SEPT10Q9P0V9 454 aa12.7□□□□□ -0.38
NUP88-201ENST00000225696 PCDHB12Q9Y5F1 795 aa12.7□□□□□ -0.38
NUP88-201ENST00000225696 A0A0A0MRY4 1105 aa12.7□□□□□ -0.38
NUP88-201ENST00000225696 RNF103O00237 685 aa12.7□□□□□ -0.38
NUP88-201ENST00000225696 HNRNPRO43390 633 aaKnown RBP12.7□□□□□ -0.38
NUP88-201ENST00000225696 PEX1O43933 1283 aa12.7□□□□□ -0.38
NUP88-201ENST00000225696 HSPA4LO95757 839 aa12.7□□□□□ -0.38
NUP88-201ENST00000225696 GLDCP23378 1020 aa12.7□□□□□ -0.38
NUP88-201ENST00000225696 PCSK6P29122 969 aa12.7□□□□□ -0.38
NUP88-201ENST00000225696 PITX1P78337 314 aaPredicted RBP12.7□□□□□ -0.38
NUP88-201ENST00000225696 XIAPP98170 497 aa12.7□□□□□ -0.38
NUP88-201ENST00000225696 TNFAIP1Q13829 316 aa12.7□□□□□ -0.38
NUP88-201ENST00000225696 R3HDM1Q15032 1099 aaKnown RBP12.7□□□□□ -0.38
NUP88-201ENST00000225696 MYLK3Q32MK0 819 aa12.7□□□□□ -0.38
NUP88-201ENST00000225696 LRRC23Q53EV4 343 aaPredicted RBP12.7□□□□□ -0.38
NUP88-201ENST00000225696 TREML2Q5T2D2 321 aa12.7□□□□□ -0.38
NUP88-201ENST00000225696 MAP3K21Q5TCX8 1036 aa12.7□□□□□ -0.38
NUP88-201ENST00000225696 FSTL4Q6MZW2 842 aa12.7□□□□□ -0.38
NUP88-201ENST00000225696 SDCCAG8Q86SQ7 713 aaPredicted RBP12.7□□□□□ -0.38
NUP88-201ENST00000225696 TMEM110Q86TL2 294 aa12.7□□□□□ -0.38
NUP88-201ENST00000225696 MARVELD2Q8N4S9 558 aa12.7□□□□□ -0.38
NUP88-201ENST00000225696 FAM156AQ8NDB6 213 aa12.7□□□□□ -0.38
NUP88-201ENST00000225696 ZFP28Q8NHY6 868 aa12.7□□□□□ -0.38
NUP88-201ENST00000225696 CNKSR2Q8WXI2 1034 aa12.7□□□□□ -0.38
NUP88-201ENST00000225696 DGCR14Q96DF8 476 aaKnown RBP12.7□□□□□ -0.38
NUP88-201ENST00000225696 P2RY11Q96G91 374 aa12.7□□□□□ -0.38
NUP88-201ENST00000225696 SPATA13Q96N96 652 aa12.7□□□□□ -0.38
NUP88-201ENST00000225696 BTBD9Q96Q07 612 aa12.7□□□□□ -0.38
NUP88-201ENST00000225696 RTKNQ9BST9 563 aa12.7□□□□□ -0.38
NUP88-201ENST00000225696 C11orf84Q9BUA3 381 aaPredicted RBP12.7□□□□□ -0.38
NUP88-201ENST00000225696 C2orf40Q9H1Z8 148 aa12.7□□□□□ -0.38
NUP88-201ENST00000225696 GGA3Q9NZ52 723 aa12.7□□□□□ -0.38
NUP88-201ENST00000225696 PSMD13Q9UNM6 376 aa12.7□□□□□ -0.38
NUP88-201ENST00000225696 PHF24Q9UPV7 400 aa12.7□□□□□ -0.38
NUP88-201ENST00000225696 USP3Q9Y6I4 520 aa12.7□□□□□ -0.38
NUP88-201ENST00000225696 RPS6KL1Q9Y6S9 549 aa12.7□□□□□ -0.38
NUP88-201ENST00000225696 GOLGA8TH3BQL2 631 aa12.69□□□□□ -0.38
NUP88-201ENST00000225696 CFLARO15519 480 aa12.69□□□□□ -0.38
NUP88-201ENST00000225696 DENRO43583 198 aaKnown RBP12.69□□□□□ -0.38
NUP88-201ENST00000225696 CLPTM1O96005 669 aa12.69□□□□□ -0.38
NUP88-201ENST00000225696 PGK2P07205 417 aa12.69□□□□□ -0.38
NUP88-201ENST00000225696 PGAM1P18669 254 aa12.69□□□□□ -0.38
NUP88-201ENST00000225696 PIK3R1P27986 724 aa12.69□□□□□ -0.38
NUP88-201ENST00000225696 USP46P62068 366 aa12.69□□□□□ -0.38
NUP88-201ENST00000225696 CEACAM7Q14002 265 aa12.69□□□□□ -0.38
NUP88-201ENST00000225696 DBN1Q16643 649 aa12.69□□□□□ -0.38
NUP88-201ENST00000225696 EML3Q32P44 896 aa12.69□□□□□ -0.38
NUP88-201ENST00000225696 FAM131BQ86XD5 332 aa12.69□□□□□ -0.38
NUP88-201ENST00000225696 DSELQ8IZU8 1212 aa12.69□□□□□ -0.38
NUP88-201ENST00000225696 GALNT4Q8N4A0 578 aa12.69□□□□□ -0.38
NUP88-201ENST00000225696 TDRD5Q8NAT2 981 aaKnown RBP12.69□□□□□ -0.38
NUP88-201ENST00000225696 CDKL2Q92772 493 aa12.69□□□□□ -0.38
NUP88-201ENST00000225696 C12orf42Q96LP6 360 aa12.69□□□□□ -0.38
NUP88-201ENST00000225696 AGAP3Q96P47 875 aa12.69□□□□□ -0.38
NUP88-201ENST00000225696 PDZD7Q9H5P4 517 aa12.69□□□□□ -0.38
NUP88-201ENST00000225696 VRTNQ9H8Y1 702 aa12.69□□□□□ -0.38
NUP88-201ENST00000225696 DPP3Q9NY33 737 aa12.69□□□□□ -0.38
NUP88-201ENST00000225696 LMCD1Q9NZU5 365 aa12.69□□□□□ -0.38
NUP88-201ENST00000225696 ATXN10Q9UBB4 475 aa12.69□□□□□ -0.38
NUP88-201ENST00000225696 MORF4L1Q9UBU8 362 aa12.69□□□□□ -0.38
NUP88-201ENST00000225696 STK39Q9UEW8 545 aa12.69□□□□□ -0.38
NUP88-201ENST00000225696 RIMS3Q9UJD0 308 aa12.69□□□□□ -0.38
NUP88-201ENST00000225696 SNX9Q9Y5X1 595 aa12.69□□□□□ -0.38
NUP88-201ENST00000225696 AP4B1Q9Y6B7 739 aa12.69□□□□□ -0.38
NUP88-201ENST00000225696 hCG_2014768A0A024R1R8 64 aa12.69□□□□□ -0.38
NUP88-201ENST00000225696 A0A087WZ62 844 aa12.69□□□□□ -0.38
NUP88-201ENST00000225696 SMIM31A0A1B0GVY4 71 aa12.69□□□□□ -0.38
NUP88-201ENST00000225696 CREB3O43889 395 aa12.69□□□□□ -0.38
NUP88-201ENST00000225696 MYL4P12829 197 aa12.69□□□□□ -0.38
NUP88-201ENST00000225696 LCP1P13796 627 aa12.69□□□□□ -0.38
NUP88-201ENST00000225696 EDNRBP24530 442 aa12.69□□□□□ -0.38
NUP88-201ENST00000225696 TMEM132DQ14C87 1099 aa12.69□□□□□ -0.38
NUP88-201ENST00000225696 CNGA3Q16281 694 aa12.69□□□□□ -0.38
NUP88-201ENST00000225696 ZNF423Q2M1K9 1284 aa12.69□□□□□ -0.38
NUP88-201ENST00000225696 Q3C1V9 767 aa12.69□□□□□ -0.38
NUP88-201ENST00000225696 LSM12Q3MHD2 195 aaKnown RBP12.69□□□□□ -0.38
NUP88-201ENST00000225696 FAM219BQ5XKK7 198 aa12.69□□□□□ -0.38
NUP88-201ENST00000225696 OR52K1Q8NGK4 314 aa12.69□□□□□ -0.38
NUP88-201ENST00000225696 CERS2Q96G23 380 aa12.69□□□□□ -0.38
NUP88-201ENST00000225696 PHF12Q96QT6 1004 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms