RNA–Protein interactions for RNA: ENST00000219689.11

USP31-201, Transcript of ubiquitin specific peptidase 31, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP31, Length 10,699 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP31-201ENST00000219689 MAP3K20Q9NYL2 800 aaKnown RBP11.28□□□□□ -0.6
USP31-201ENST00000219689 ZNF112Q9UJU3 913 aa11.28□□□□□ -0.6
USP31-201ENST00000219689 CDH9Q9ULB4 789 aa11.28□□□□□ -0.6
USP31-201ENST00000219689 GMPPBQ9Y5P6 360 aa11.28□□□□□ -0.6
USP31-201ENST00000219689 GJA3Q9Y6H8 435 aa11.28□□□□□ -0.6
USP31-201ENST00000219689 UBE2QL1A1L167 161 aa11.28□□□□□ -0.6
USP31-201ENST00000219689 MGRN1O60291 552 aa11.28□□□□□ -0.6
USP31-201ENST00000219689 FRG1Q14331 258 aaKnown RBP11.28□□□□□ -0.6
USP31-201ENST00000219689 KIAA1841Q6NSI8 718 aa11.28□□□□□ -0.6
USP31-201ENST00000219689 DNAJC14Q6Y2X3 702 aaPredicted RBP11.28□□□□□ -0.6
USP31-201ENST00000219689 ADHFE1Q8IWW8 467 aa11.28□□□□□ -0.6
USP31-201ENST00000219689 CEP170Q5SW79 1584 aa11.28□□□□□ -0.6
USP31-201ENST00000219689 LTFP02788 710 aa11.28□□□□□ -0.6
USP31-201ENST00000219689 RCVRNP35243 200 aa11.28□□□□□ -0.6
USP31-201ENST00000219689 CDK8P49336 464 aa11.28□□□□□ -0.6
USP31-201ENST00000219689 HSD17B4P51659 736 aa11.28□□□□□ -0.6
USP31-201ENST00000219689 FBXO30Q8TB52 745 aa11.28□□□□□ -0.6
USP31-201ENST00000219689 NACC2Q96BF6 587 aa11.28□□□□□ -0.6
USP31-201ENST00000219689 ABCC10Q5T3U5 1492 aa11.28□□□□□ -0.6
USP31-201ENST00000219689 FGFR2P21802 821 aa11.28□□□□□ -0.6
USP31-201ENST00000219689 KRT78Q8N1N4 520 aa11.28□□□□□ -0.6
USP31-201ENST00000219689 UBE2J2Q8N2K1 259 aa11.28□□□□□ -0.6
USP31-201ENST00000219689 ASIC4Q96FT7 647 aa11.28□□□□□ -0.6
USP31-201ENST00000219689 HGH1Q9BTY7 390 aa11.28□□□□□ -0.6
USP31-201ENST00000219689 KIF13AQ9H1H9 1805 aa11.28□□□□□ -0.6
USP31-201ENST00000219689 AHCTF1Q8WYP5 2266 aa11.28□□□□□ -0.6
USP31-201ENST00000219689 IRF6O14896 467 aa11.27□□□□□ -0.6
USP31-201ENST00000219689 OR7A10O76100 309 aa11.27□□□□□ -0.6
USP31-201ENST00000219689 CCNG1P51959 295 aa11.27□□□□□ -0.6
USP31-201ENST00000219689 TRIM32Q13049 653 aa11.27□□□□□ -0.6
USP31-201ENST00000219689 TNFAIP1Q13829 316 aa11.27□□□□□ -0.6
USP31-201ENST00000219689 CYP4Z1Q86W10 505 aa11.27□□□□□ -0.6
USP31-201ENST00000219689 ERI1Q8IV48 349 aaKnown RBP11.27□□□□□ -0.6
USP31-201ENST00000219689 FAM172AQ8WUF8 416 aa11.27□□□□□ -0.6
USP31-201ENST00000219689 ZNF879B4DU55 563 aa11.27□□□□□ -0.6
USP31-201ENST00000219689 CES2O00748 559 aa11.27□□□□□ -0.6
USP31-201ENST00000219689 RASAL3Q86YV0 1011 aa11.27□□□□□ -0.6
USP31-201ENST00000219689 FAM120BQ96EK7 910 aaKnown RBP11.27□□□□□ -0.6
USP31-201ENST00000219689 GSTK1Q9Y2Q3 226 aa11.27□□□□□ -0.6
USP31-201ENST00000219689 CAMSAP1Q5T5Y3 1602 aa11.27□□□□□ -0.6
USP31-201ENST00000219689 TCP10L2B9ZVM9 353 aa11.27□□□□□ -0.6
USP31-201ENST00000219689 EXTL3O43909 919 aa11.27□□□□□ -0.6
USP31-201ENST00000219689 RAD17O75943 681 aa11.27□□□□□ -0.6
USP31-201ENST00000219689 AMPD1P23109 780 aa11.27□□□□□ -0.6
USP31-201ENST00000219689 KHDC1Q4VXA5 237 aaKnown RBP11.27□□□□□ -0.6
USP31-201ENST00000219689 SNAP47Q5SQN1 464 aa11.27□□□□□ -0.6
USP31-201ENST00000219689 C16orf46Q6P387 395 aa11.27□□□□□ -0.6
USP31-201ENST00000219689 TXNDC11Q6PKC3 985 aa11.27□□□□□ -0.6
USP31-201ENST00000219689 CCDC126Q96EE4 140 aa11.27□□□□□ -0.6
USP31-201ENST00000219689 FOPNLQ96NB1 174 aa11.27□□□□□ -0.6
USP31-201ENST00000219689 DENND2DQ9H6A0 471 aaPredicted RBP11.27□□□□□ -0.6
USP31-201ENST00000219689 ARHGAP20Q9P2F6 1191 aa11.27□□□□□ -0.6
USP31-201ENST00000219689 ENOPH1Q9UHY7 261 aa11.27□□□□□ -0.6
USP31-201ENST00000219689 FAM240BA0A1B0GVZ2 78 aa11.27□□□□□ -0.61
USP31-201ENST00000219689 HERC3Q15034 1050 aa11.27□□□□□ -0.61
USP31-201ENST00000219689 PLCL1Q15111 1095 aa11.27□□□□□ -0.61
USP31-201ENST00000219689 FASTKD5Q7L8L6 764 aaKnown RBP11.27□□□□□ -0.61
USP31-201ENST00000219689 TMC7Q7Z402 723 aa11.27□□□□□ -0.61
USP31-201ENST00000219689 SLC47A2Q86VL8 602 aa11.27□□□□□ -0.61
USP31-201ENST00000219689 WDR6Q9NNW5 1121 aaKnown RBP11.27□□□□□ -0.61
USP31-201ENST00000219689 GNEQ9Y223 722 aaKnown RBP11.27□□□□□ -0.61
USP31-201ENST00000219689 PTK6Q13882 451 aa11.27□□□□□ -0.61
USP31-201ENST00000219689 MAP3K14Q99558 947 aa11.27□□□□□ -0.61
USP31-201ENST00000219689 KCNS3Q9BQ31 491 aa11.27□□□□□ -0.61
USP31-201ENST00000219689 EMILIN2Q9BXX0 1053 aa11.27□□□□□ -0.61
USP31-201ENST00000219689 IKZF3Q9UKT9 509 aa11.27□□□□□ -0.61
USP31-201ENST00000219689 TBC1D24Q9ULP9 559 aa11.27□□□□□ -0.61
USP31-201ENST00000219689 CHD3Q12873 2000 aaKnown RBP11.27□□□□□ -0.61
USP31-201ENST00000219689 A0A0A6YYK5 440 aaPredicted RBP11.27□□□□□ -0.61
USP31-201ENST00000219689 ETS1P14921 441 aa11.27□□□□□ -0.61
USP31-201ENST00000219689 HMGXB3Q12766 1538 aa11.27□□□□□ -0.61
USP31-201ENST00000219689 TSGA10IPQ3SY00 556 aa11.27□□□□□ -0.61
USP31-201ENST00000219689 SNRNP48Q6IEG0 339 aaKnown RBP11.27□□□□□ -0.61
USP31-201ENST00000219689 AADACL2Q6P093 401 aa11.27□□□□□ -0.61
USP31-201ENST00000219689 C12orf56Q8IXR9 622 aa11.27□□□□□ -0.61
USP31-201ENST00000219689 NSMCE3Q96MG7 304 aa11.27□□□□□ -0.61
USP31-201ENST00000219689 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP11.27□□□□□ -0.61
USP31-201ENST00000219689 MSH3P20585 1137 aa11.27□□□□□ -0.61
USP31-201ENST00000219689 ULK3Q6PHR2 472 aa11.27□□□□□ -0.61
USP31-201ENST00000219689 KCTD8Q6ZWB6 473 aa11.27□□□□□ -0.61
USP31-201ENST00000219689 FAM49AQ9H0Q0 323 aaPredicted RBP11.27□□□□□ -0.61
USP31-201ENST00000219689 TTYH1Q9H313 450 aaPredicted RBP11.27□□□□□ -0.61
USP31-201ENST00000219689 ZNF197O14709 1029 aa11.27□□□□□ -0.61
USP31-201ENST00000219689 AUHQ13825 339 aaKnown RBP11.27□□□□□ -0.61
USP31-201ENST00000219689 TRAPPC3LQ5T215 181 aa11.27□□□□□ -0.61
USP31-201ENST00000219689 ARHGAP36Q6ZRI8 547 aa11.27□□□□□ -0.61
USP31-201ENST00000219689 ELMOD2Q8IZ81 293 aa11.27□□□□□ -0.61
USP31-201ENST00000219689 MREGQ8N565 214 aa11.27□□□□□ -0.61
USP31-201ENST00000219689 AKAP1Q92667 903 aaKnown RBP eCLIP11.27□□□□□ -0.61
USP31-201ENST00000219689 S100PBPQ96BU1 408 aa11.27□□□□□ -0.61
USP31-201ENST00000219689 SLC39A3Q9BRY0 314 aa11.27□□□□□ -0.61
USP31-201ENST00000219689 RGSL1A5PLK6 1076 aa11.27□□□□□ -0.61
USP31-201ENST00000219689 C12orf71A8MTZ7 269 aa11.27□□□□□ -0.61
USP31-201ENST00000219689 PDGFRBP09619 1106 aa11.27□□□□□ -0.61
USP31-201ENST00000219689 CRKP46108 304 aa11.27□□□□□ -0.61
USP31-201ENST00000219689 BLOC1S4Q9NUP1 217 aa11.27□□□□□ -0.61
USP31-201ENST00000219689 CLN6Q9NWW5 311 aa11.27□□□□□ -0.61
USP31-201ENST00000219689 NKX1-2Q9UD57 310 aaPredicted RBP11.27□□□□□ -0.61
USP31-201ENST00000219689 AGO2Q9UKV8 859 aaKnown RBP11.27□□□□□ -0.61
USP31-201ENST00000219689 ASXL2Q76L83 1435 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms