RNA–Protein interactions for RNA: ENST00000215587.11

POLR2E-201, Transcript of RNA polymerase II subunit E, humanhuman

TSL 3

Gene POLR2E, Length 1,286 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2E-201ENST00000215587 H7C0C1 242 aa17.05■□□□□ 0.32
POLR2E-201ENST00000215587 TRDMT1O14717 391 aaKnown RBP17.05■□□□□ 0.32
POLR2E-201ENST00000215587 SLC9A3R1O14745 358 aaPredicted RBP17.05■□□□□ 0.32
POLR2E-201ENST00000215587 TSPAN3O60637 253 aa17.05■□□□□ 0.32
POLR2E-201ENST00000215587 GBP2P32456 591 aaPredicted RBP17.05■□□□□ 0.32
POLR2E-201ENST00000215587 COILP38432 576 aaPredicted RBP17.05■□□□□ 0.32
POLR2E-201ENST00000215587 ATP5OP48047 213 aa17.05■□□□□ 0.32
POLR2E-201ENST00000215587 VCPP55072 806 aaKnown RBP17.05■□□□□ 0.32
POLR2E-201ENST00000215587 LMNB2Q03252 620 aa17.05■□□□□ 0.32
POLR2E-201ENST00000215587 TFF2Q03403 129 aa17.05■□□□□ 0.32
POLR2E-201ENST00000215587 GBE1Q04446 702 aa17.05■□□□□ 0.32
POLR2E-201ENST00000215587 BYSLQ13895 437 aaKnown RBP17.05■□□□□ 0.32
POLR2E-201ENST00000215587 SKIV2LQ15477 1246 aaKnown RBP17.05■□□□□ 0.32
POLR2E-201ENST00000215587 C5orf22Q49AR2 442 aa17.05■□□□□ 0.32
POLR2E-201ENST00000215587 FAM78AQ5JUQ0 283 aa17.05■□□□□ 0.32
POLR2E-201ENST00000215587 C8orf74Q6P047 294 aa17.05■□□□□ 0.32
POLR2E-201ENST00000215587 DRICH1Q6PGQ1 229 aaPredicted RBP17.05■□□□□ 0.32
POLR2E-201ENST00000215587 CCDC137Q6PK04 289 aaKnown RBP17.05■□□□□ 0.32
POLR2E-201ENST00000215587 TFAP2DQ7Z6R9 452 aa17.05■□□□□ 0.32
POLR2E-201ENST00000215587 CCDC105Q8IYK2 499 aa17.05■□□□□ 0.32
POLR2E-201ENST00000215587 KIAA1958Q8N8K9 716 aa17.05■□□□□ 0.32
POLR2E-201ENST00000215587 NOA1Q8NC60 698 aaKnown RBP17.05■□□□□ 0.32
POLR2E-201ENST00000215587 GRK7Q8WTQ7 553 aa17.05■□□□□ 0.32
POLR2E-201ENST00000215587 NKD2Q969F2 451 aaPredicted RBP17.05■□□□□ 0.32
POLR2E-201ENST00000215587 OTUB2Q96DC9 234 aa17.05■□□□□ 0.32
POLR2E-201ENST00000215587 CCDC114Q96M63 670 aa17.05■□□□□ 0.32
POLR2E-201ENST00000215587 PRICKLE1Q96MT3 831 aaPredicted RBP17.05■□□□□ 0.32
POLR2E-201ENST00000215587 TMEM248Q9NWD8 314 aa17.05■□□□□ 0.32
POLR2E-201ENST00000215587 OBP2AQ9NY56 170 aa17.05■□□□□ 0.32
POLR2E-201ENST00000215587 DTLQ9NZJ0 730 aa17.05■□□□□ 0.32
POLR2E-201ENST00000215587 FEZ2Q9UHY8 353 aaPredicted RBP17.05■□□□□ 0.32
POLR2E-201ENST00000215587 MFHAS1Q9Y4C4 1052 aa17.05■□□□□ 0.32
POLR2E-201ENST00000215587 A0A1B0GVM2 712 aa17.04■□□□□ 0.32
POLR2E-201ENST00000215587 TCAF2A6NFQ2 919 aa17.04■□□□□ 0.32
POLR2E-201ENST00000215587 NCAM2O15394 837 aa17.04■□□□□ 0.32
POLR2E-201ENST00000215587 CLDN11O75508 207 aa17.04■□□□□ 0.32
POLR2E-201ENST00000215587 CYBBP04839 570 aa17.04■□□□□ 0.32
POLR2E-201ENST00000215587 RBP3P10745 1247 aa17.04■□□□□ 0.32
POLR2E-201ENST00000215587 MX2P20592 715 aa17.04■□□□□ 0.32
POLR2E-201ENST00000215587 MAPKAPK2P49137 400 aa17.04■□□□□ 0.32
POLR2E-201ENST00000215587 IRAK1P51617 712 aa17.04■□□□□ 0.32
POLR2E-201ENST00000215587 CDH4P55283 916 aa17.04■□□□□ 0.32
POLR2E-201ENST00000215587 DR1Q01658 176 aa17.04■□□□□ 0.32
POLR2E-201ENST00000215587 XRCC4Q13426 336 aa17.04■□□□□ 0.32
POLR2E-201ENST00000215587 DHX34Q14147 1143 aaKnown RBP17.04■□□□□ 0.32
POLR2E-201ENST00000215587 PDK1Q15118 436 aa17.04■□□□□ 0.32
POLR2E-201ENST00000215587 ALFQ53S48 1182 aa17.04■□□□□ 0.32
POLR2E-201ENST00000215587 ARTNQ5T4W7 220 aa17.04■□□□□ 0.32
POLR2E-201ENST00000215587 TTC27Q6P3X3 843 aa17.04■□□□□ 0.32
POLR2E-201ENST00000215587 CHST9Q7L1S5 443 aa17.04■□□□□ 0.32
POLR2E-201ENST00000215587 MAATS1Q7Z4T9 603 aa17.04■□□□□ 0.32
POLR2E-201ENST00000215587 NLRP14Q86W24 1093 aa17.04■□□□□ 0.32
POLR2E-201ENST00000215587 CIR1Q86X95 450 aaPredicted RBP17.04■□□□□ 0.32
POLR2E-201ENST00000215587 CDKL3Q8IVW4 592 aaPredicted RBP17.04■□□□□ 0.32
POLR2E-201ENST00000215587 CFAP52Q8N1V2 620 aa17.04■□□□□ 0.32
POLR2E-201ENST00000215587 TDRD5Q8NAT2 981 aaKnown RBP17.04■□□□□ 0.32
POLR2E-201ENST00000215587 SLC35B2Q8TB61 432 aa17.04■□□□□ 0.32
POLR2E-201ENST00000215587 UBXN4Q92575 508 aa17.04■□□□□ 0.32
POLR2E-201ENST00000215587 E2F7Q96AV8 911 aa17.04■□□□□ 0.32
POLR2E-201ENST00000215587 TMA16Q96EY4 203 aaKnown RBP17.04■□□□□ 0.32
POLR2E-201ENST00000215587 POMKQ9H5K3 350 aa17.04■□□□□ 0.32
POLR2E-201ENST00000215587 TRPV4Q9HBA0 871 aa17.04■□□□□ 0.32
POLR2E-201ENST00000215587 PCYOX1Q9UHG3 505 aa17.04■□□□□ 0.32
POLR2E-201ENST00000215587 DNPEPQ9ULA0 475 aa17.04■□□□□ 0.32
POLR2E-201ENST00000215587 ZNF148Q9UQR1 794 aa17.04■□□□□ 0.32
POLR2E-201ENST00000215587 USP15Q9Y4E8 981 aaPredicted RBP17.04■□□□□ 0.32
POLR2E-201ENST00000215587 ZFP37Q9Y6Q3 630 aaPredicted RBP17.04■□□□□ 0.32
POLR2E-201ENST00000215587 DOCK6Q96HP0 2047 aa17.03■□□□□ 0.32
POLR2E-201ENST00000215587 HACD1B0YJ81 288 aa17.03■□□□□ 0.32
POLR2E-201ENST00000215587 PPP1R12AO14974 1030 aaPredicted RBP17.03■□□□□ 0.32
POLR2E-201ENST00000215587 TBL1XO60907 577 aa17.03■□□□□ 0.32
POLR2E-201ENST00000215587 ZNF189O75820 626 aaPredicted RBP17.03■□□□□ 0.32
POLR2E-201ENST00000215587 CNTN5O94779 1100 aa17.03■□□□□ 0.32
POLR2E-201ENST00000215587 ECEL1O95672 775 aa17.03■□□□□ 0.32
POLR2E-201ENST00000215587 GAS8O95995 478 aa17.03■□□□□ 0.32
POLR2E-201ENST00000215587 RPS24P62847 133 aaKnown RBP17.03■□□□□ 0.32
POLR2E-201ENST00000215587 MPPE1Q53F39 396 aa17.03■□□□□ 0.32
POLR2E-201ENST00000215587 GLE1Q53GS7 698 aaKnown RBP17.03■□□□□ 0.32
POLR2E-201ENST00000215587 DARS2Q6PI48 645 aaKnown RBP17.03■□□□□ 0.32
POLR2E-201ENST00000215587 POTEHQ6S545 545 aa17.03■□□□□ 0.32
POLR2E-201ENST00000215587 GSTA5Q7RTV2 222 aa17.03■□□□□ 0.32
POLR2E-201ENST00000215587 ALYREFQ86V81 257 aaKnown RBP17.03■□□□□ 0.32
POLR2E-201ENST00000215587 ZC3H18Q86VM9 953 aaKnown RBP17.03■□□□□ 0.32
POLR2E-201ENST00000215587 CCDC117Q8IWD4 279 aaPredicted RBP17.03■□□□□ 0.32
POLR2E-201ENST00000215587 NPWQ8N729 165 aa17.03■□□□□ 0.32
POLR2E-201ENST00000215587 ATL2Q8NHH9 583 aa17.03■□□□□ 0.32
POLR2E-201ENST00000215587 MYEOVQ96EZ4 313 aa17.03■□□□□ 0.32
POLR2E-201ENST00000215587 MYADMQ96S97 322 aa17.03■□□□□ 0.32
POLR2E-201ENST00000215587 FERMT1Q9BQL6 677 aa17.03■□□□□ 0.32
POLR2E-201ENST00000215587 BRD8Q9H0E9 1235 aa17.03■□□□□ 0.32
POLR2E-201ENST00000215587 UBE2ZQ9H832 354 aaPredicted RBP17.03■□□□□ 0.32
POLR2E-201ENST00000215587 DRG1Q9Y295 367 aaKnown RBP17.03■□□□□ 0.32
POLR2E-201ENST00000215587 NUP210Q8TEM1 1887 aaPredicted RBP17.03■□□□□ 0.32
POLR2E-201ENST00000215587 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP17.02■□□□□ 0.32
POLR2E-201ENST00000215587 CFAP69A5D8W1 941 aa17.02■□□□□ 0.32
POLR2E-201ENST00000215587 H3BQ06 376 aaPredicted RBP17.02■□□□□ 0.32
POLR2E-201ENST00000215587 GFRA2O00451 464 aa17.02■□□□□ 0.32
POLR2E-201ENST00000215587 GPR37L1O60883 481 aa17.02■□□□□ 0.32
POLR2E-201ENST00000215587 MAP3K6O95382 1288 aa17.02■□□□□ 0.32
POLR2E-201ENST00000215587 ITGAVP06756 1048 aa17.02■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms