RNA–Protein interactions for RNA: ENST00000212355.8

TGFBR3-201, Transcript of transforming growth factor beta receptor 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TGFBR3, Length 6,465 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-201ENST00000212355 CLIP3Q96DZ5 547 aa13.87□□□□□ -0.19
TGFBR3-201ENST00000212355 NDUFAF1Q9Y375 327 aa13.87□□□□□ -0.19
TGFBR3-201ENST00000212355 DYTNA2CJ06 578 aa13.87□□□□□ -0.19
TGFBR3-201ENST00000212355 TMC5Q6UXY8 1006 aa13.87□□□□□ -0.19
TGFBR3-201ENST00000212355 FAM183BPQ6ZVS7 135 aa13.87□□□□□ -0.19
TGFBR3-201ENST00000212355 C19orf18Q8NEA5 215 aa13.87□□□□□ -0.19
TGFBR3-201ENST00000212355 HGH1Q9BTY7 390 aa13.87□□□□□ -0.19
TGFBR3-201ENST00000212355 PCDH9Q9HC56 1237 aa13.87□□□□□ -0.19
TGFBR3-201ENST00000212355 ATP13A1Q9HD20 1204 aa13.87□□□□□ -0.19
TGFBR3-201ENST00000212355 COMMD8Q9NX08 183 aa13.87□□□□□ -0.19
TGFBR3-201ENST00000212355 TOR4AQ9NXH8 423 aa13.87□□□□□ -0.19
TGFBR3-201ENST00000212355 TMX2Q9Y320 296 aa13.87□□□□□ -0.19
TGFBR3-201ENST00000212355 PXDNQ92626 1479 aa13.87□□□□□ -0.19
TGFBR3-201ENST00000212355 UBXN8O00124 270 aa13.87□□□□□ -0.19
TGFBR3-201ENST00000212355 PGM3O95394 542 aa13.87□□□□□ -0.19
TGFBR3-201ENST00000212355 TNNI3P19429 210 aa13.87□□□□□ -0.19
TGFBR3-201ENST00000212355 ITGALP20701 1170 aa13.87□□□□□ -0.19
TGFBR3-201ENST00000212355 ELF3P78545 371 aaPredicted RBP13.87□□□□□ -0.19
TGFBR3-201ENST00000212355 CROTQ9UKG9 612 aa13.87□□□□□ -0.19
TGFBR3-201ENST00000212355 MRASO14807 208 aa13.87□□□□□ -0.19
TGFBR3-201ENST00000212355 ERCC2P18074 760 aa13.87□□□□□ -0.19
TGFBR3-201ENST00000212355 NCKAP1LP55160 1127 aa13.87□□□□□ -0.19
TGFBR3-201ENST00000212355 MRPS31Q92665 395 aaKnown RBP13.87□□□□□ -0.19
TGFBR3-201ENST00000212355 RIOX1Q9H6W3 641 aa13.87□□□□□ -0.19
TGFBR3-201ENST00000212355 NUDT14O95848 222 aa13.87□□□□□ -0.19
TGFBR3-201ENST00000212355 SLC34A1Q06495 639 aa13.87□□□□□ -0.19
TGFBR3-201ENST00000212355 USP39Q53GS9 565 aaKnown RBP13.87□□□□□ -0.19
TGFBR3-201ENST00000212355 C11orf88Q6PI97 169 aa13.87□□□□□ -0.19
TGFBR3-201ENST00000212355 LNX1Q8TBB1 728 aaPredicted RBP13.87□□□□□ -0.19
TGFBR3-201ENST00000212355 DNAJB14Q8TBM8 379 aa13.87□□□□□ -0.19
TGFBR3-201ENST00000212355 MAGEE2Q8TD90 523 aaPredicted RBP13.87□□□□□ -0.19
TGFBR3-201ENST00000212355 COL26A1Q96A83 441 aa13.87□□□□□ -0.19
TGFBR3-201ENST00000212355 SPACA7Q96KW9 195 aa13.87□□□□□ -0.19
TGFBR3-201ENST00000212355 ZFP14Q9HCL3 533 aa13.87□□□□□ -0.19
TGFBR3-201ENST00000212355 A1CFQ9NQ94 594 aaKnown RBP13.87□□□□□ -0.19
TGFBR3-201ENST00000212355 A0A0B4J269 797 aa13.86□□□□□ -0.19
TGFBR3-201ENST00000212355 SYNCRIPO60506 623 aaKnown RBP13.86□□□□□ -0.19
TGFBR3-201ENST00000212355 MPOP05164 745 aa13.86□□□□□ -0.19
TGFBR3-201ENST00000212355 TPBGLP0DKB5 382 aa13.86□□□□□ -0.19
TGFBR3-201ENST00000212355 CD86P42081 329 aa13.86□□□□□ -0.19
TGFBR3-201ENST00000212355 GRTP1Q5TC63 336 aa13.86□□□□□ -0.19
TGFBR3-201ENST00000212355 WDR59Q6PJI9 974 aa13.86□□□□□ -0.19
TGFBR3-201ENST00000212355 DTNBP1Q96EV8 351 aa13.86□□□□□ -0.19
TGFBR3-201ENST00000212355 SPATC1LQ9H0A9 340 aa13.86□□□□□ -0.19
TGFBR3-201ENST00000212355 PAPOLBQ9NRJ5 636 aaKnown RBP13.86□□□□□ -0.19
TGFBR3-201ENST00000212355 CYP39A1Q9NYL5 469 aa13.86□□□□□ -0.19
TGFBR3-201ENST00000212355 SALL1Q9NSC2 1324 aa13.86□□□□□ -0.19
TGFBR3-201ENST00000212355 PEX10O60683 326 aa13.86□□□□□ -0.19
TGFBR3-201ENST00000212355 PEX11AO75192 247 aa13.86□□□□□ -0.19
TGFBR3-201ENST00000212355 PIGNO95427 931 aa13.86□□□□□ -0.19
TGFBR3-201ENST00000212355 PGAM1P18669 254 aa13.86□□□□□ -0.19
TGFBR3-201ENST00000212355 FASP25445 335 aa13.86□□□□□ -0.19
TGFBR3-201ENST00000212355 TPP2P29144 1249 aaPredicted RBP13.86□□□□□ -0.19
TGFBR3-201ENST00000212355 HSPA13P48723 471 aa13.86□□□□□ -0.19
TGFBR3-201ENST00000212355 ECM1Q16610 540 aa13.86□□□□□ -0.19
TGFBR3-201ENST00000212355 DDR2Q16832 855 aa13.86□□□□□ -0.19
TGFBR3-201ENST00000212355 KLHL17Q6TDP4 642 aa13.86□□□□□ -0.19
TGFBR3-201ENST00000212355 CAB39LQ9H9S4 337 aa13.86□□□□□ -0.19
TGFBR3-201ENST00000212355 TRPM5Q9NZQ8 1165 aa13.86□□□□□ -0.19
TGFBR3-201ENST00000212355 SPATA31A5Q5VU36 1347 aa13.86□□□□□ -0.19
TGFBR3-201ENST00000212355 SPATA31A7Q8IWB4 1347 aa13.86□□□□□ -0.19
TGFBR3-201ENST00000212355 RABGGTBP53611 331 aa13.86□□□□□ -0.19
TGFBR3-201ENST00000212355 GALNT3Q14435 633 aa13.86□□□□□ -0.19
TGFBR3-201ENST00000212355 EFL1Q7Z2Z2 1120 aaKnown RBP13.86□□□□□ -0.19
TGFBR3-201ENST00000212355 ADGRE3Q9BY15 652 aa13.86□□□□□ -0.19
TGFBR3-201ENST00000212355 NDOR1Q9UHB4 597 aa13.86□□□□□ -0.19
TGFBR3-201ENST00000212355 FAM155BO75949 473 aa13.86□□□□□ -0.19
TGFBR3-201ENST00000212355 TBX2Q13207 712 aaPredicted RBP13.86□□□□□ -0.19
TGFBR3-201ENST00000212355 RNF44Q7L0R7 432 aa13.86□□□□□ -0.19
TGFBR3-201ENST00000212355 METTL6Q8TCB7 284 aa13.86□□□□□ -0.19
TGFBR3-201ENST00000212355 ARHGEF3Q9NR81 526 aa13.86□□□□□ -0.19
TGFBR3-201ENST00000212355 ETNK2Q9NVF9 386 aa13.86□□□□□ -0.19
TGFBR3-201ENST00000212355 AP4S1Q9Y587 144 aa13.86□□□□□ -0.19
TGFBR3-201ENST00000212355 LRATO95237 230 aa13.86□□□□□ -0.19
TGFBR3-201ENST00000212355 PRLRP16471 622 aa13.86□□□□□ -0.19
TGFBR3-201ENST00000212355 MUTP22033 750 aa13.86□□□□□ -0.19
TGFBR3-201ENST00000212355 ADORA2AP29274 412 aa13.86□□□□□ -0.19
TGFBR3-201ENST00000212355 LRPAP1P30533 357 aa13.86□□□□□ -0.19
TGFBR3-201ENST00000212355 ABL2P42684 1182 aa13.86□□□□□ -0.19
TGFBR3-201ENST00000212355 FBXO48Q5FWF7 155 aa13.86□□□□□ -0.19
TGFBR3-201ENST00000212355 C4orf22Q6V702 233 aa13.86□□□□□ -0.19
TGFBR3-201ENST00000212355 TMC7Q7Z402 723 aa13.86□□□□□ -0.19
TGFBR3-201ENST00000212355 C4orf19Q8IY42 314 aa13.86□□□□□ -0.19
TGFBR3-201ENST00000212355 C2orf73Q8N5S3 287 aaPredicted RBP13.86□□□□□ -0.19
TGFBR3-201ENST00000212355 GMCL1P1Q8NEA9 526 aa13.86□□□□□ -0.19
TGFBR3-201ENST00000212355 AGAP11Q8TF27 550 aa13.86□□□□□ -0.19
TGFBR3-201ENST00000212355 SLC27A5Q9Y2P5 690 aa13.86□□□□□ -0.19
TGFBR3-201ENST00000212355 LYVE1Q9Y5Y7 322 aa13.86□□□□□ -0.19
TGFBR3-201ENST00000212355 HNRNPRO43390 633 aaKnown RBP13.85□□□□□ -0.19
TGFBR3-201ENST00000212355 RAMP2O60895 175 aa13.85□□□□□ -0.19
TGFBR3-201ENST00000212355 CYP4B1P13584 511 aa13.85□□□□□ -0.19
TGFBR3-201ENST00000212355 IPCEF1Q8WWN9 437 aaPredicted RBP13.85□□□□□ -0.19
TGFBR3-201ENST00000212355 P2RX7Q99572 595 aaKnown RBP13.85□□□□□ -0.19
TGFBR3-201ENST00000212355 ULBP1Q9BZM6 244 aa13.85□□□□□ -0.19
TGFBR3-201ENST00000212355 C17orf75Q9HAS0 396 aa13.85□□□□□ -0.19
TGFBR3-201ENST00000212355 ATP6AP2A0A1C7CYW4 349 aa13.85□□□□□ -0.19
TGFBR3-201ENST00000212355 CLOCKO15516 846 aa13.85□□□□□ -0.19
TGFBR3-201ENST00000212355 ENTPD5O75356 428 aa13.85□□□□□ -0.19
TGFBR3-201ENST00000212355 ATP6AP2O75787 350 aa13.85□□□□□ -0.19
TGFBR3-201ENST00000212355 KRT36O76013 467 aa13.85□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms