RNA–Protein interactions for RNA: ENST00000172853.14

NEB-201, Transcript of nebulin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NEB, Length 20,634 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEB-201ENST00000172853 CCNIQ14094 377 aa3.51□□□□□ -1.85
NEB-201ENST00000172853 SF3B3Q15393 1217 aaKnown RBP3.51□□□□□ -1.85
NEB-201ENST00000172853 ALG10BQ5I7T1 473 aa3.51□□□□□ -1.85
NEB-201ENST00000172853 RAET1GQ6H3X3 334 aa3.51□□□□□ -1.85
NEB-201ENST00000172853 XRRA1Q6P2D8 792 aa3.51□□□□□ -1.85
NEB-201ENST00000172853 C6orf120Q7Z4R8 191 aa3.51□□□□□ -1.85
NEB-201ENST00000172853 SCUBE3Q8IX30 993 aa3.51□□□□□ -1.85
NEB-201ENST00000172853 USP38Q8NB14 1042 aa3.51□□□□□ -1.85
NEB-201ENST00000172853 MYOZ2Q9NPC6 264 aa3.51□□□□□ -1.85
NEB-201ENST00000172853 KCTD5Q9NXV2 234 aa3.51□□□□□ -1.85
NEB-201ENST00000172853 GMPPBQ9Y5P6 360 aa3.51□□□□□ -1.85
NEB-201ENST00000172853 IRAK3Q9Y616 596 aa3.51□□□□□ -1.85
NEB-201ENST00000172853 SCAF11Q99590 1463 aaKnown RBP3.51□□□□□ -1.85
NEB-201ENST00000172853 hCG_2014768A0A024R1R8 64 aa3.51□□□□□ -1.85
NEB-201ENST00000172853 OTOL1A6NHN0 477 aaPredicted RBP3.51□□□□□ -1.85
NEB-201ENST00000172853 CA12O43570 354 aa3.51□□□□□ -1.85
NEB-201ENST00000172853 CTNND1O60716 968 aaKnown RBP3.51□□□□□ -1.85
NEB-201ENST00000172853 SERPINA1P01009 418 aa3.51□□□□□ -1.85
NEB-201ENST00000172853 EIF4EP06730 217 aaKnown RBP3.51□□□□□ -1.85
NEB-201ENST00000172853 CHRNB3Q05901 458 aa3.51□□□□□ -1.85
NEB-201ENST00000172853 ZNF827Q17R98 1081 aa3.51□□□□□ -1.85
NEB-201ENST00000172853 FAM83EQ2M2I3 478 aa3.51□□□□□ -1.85
NEB-201ENST00000172853 PAPD7Q5XG87 772 aaKnown RBP3.51□□□□□ -1.85
NEB-201ENST00000172853 ZC3H18Q86VM9 953 aaKnown RBP3.51□□□□□ -1.85
NEB-201ENST00000172853 MRPL41Q8IXM3 137 aaKnown RBP3.51□□□□□ -1.85
NEB-201ENST00000172853 GPALPP1Q8IXQ4 340 aa3.51□□□□□ -1.85
NEB-201ENST00000172853 CYGBQ8WWM9 190 aa3.51□□□□□ -1.85
NEB-201ENST00000172853 TRIM51Q9BSJ1 452 aa3.51□□□□□ -1.85
NEB-201ENST00000172853 RGS14O43566 566 aa3.51□□□□□ -1.85
NEB-201ENST00000172853 GRM3Q14832 879 aa3.51□□□□□ -1.85
NEB-201ENST00000172853 DDR2Q16832 855 aa3.51□□□□□ -1.85
NEB-201ENST00000172853 TIGD6Q17RP2 521 aa3.51□□□□□ -1.85
NEB-201ENST00000172853 GRHL2Q6ISB3 625 aa3.51□□□□□ -1.85
NEB-201ENST00000172853 BEND5Q7L4P6 421 aa3.51□□□□□ -1.85
NEB-201ENST00000172853 GET4Q7L5D6 327 aaPredicted RBP3.51□□□□□ -1.85
NEB-201ENST00000172853 SNF8Q96H20 258 aa3.51□□□□□ -1.85
NEB-201ENST00000172853 TMEM121Q9BTD3 319 aa3.51□□□□□ -1.85
NEB-201ENST00000172853 BCO2Q9BYV7 579 aa3.51□□□□□ -1.85
NEB-201ENST00000172853 CST11Q9H112 138 aa3.51□□□□□ -1.85
NEB-201ENST00000172853 CLIC5Q9NZA1 410 aa3.51□□□□□ -1.85
NEB-201ENST00000172853 GRID1Q9ULK0 1009 aa3.51□□□□□ -1.85
NEB-201ENST00000172853 SHROOM2Q13796 1616 aa3.51□□□□□ -1.85
NEB-201ENST00000172853 IGF1RP08069 1367 aa3.51□□□□□ -1.85
NEB-201ENST00000172853 RALGAPBQ86X10 1494 aa3.51□□□□□ -1.85
NEB-201ENST00000172853 PDHA2P29803 388 aa3.51□□□□□ -1.85
NEB-201ENST00000172853 SNRPFP62306 86 aaKnown RBP3.51□□□□□ -1.85
NEB-201ENST00000172853 FCHO2Q0JRZ9 810 aa3.51□□□□□ -1.85
NEB-201ENST00000172853 C11orf70Q9BRQ4 267 aa3.51□□□□□ -1.85
NEB-201ENST00000172853 GOLPH3Q9H4A6 298 aa3.51□□□□□ -1.85
NEB-201ENST00000172853 PRMT2P55345 433 aa3.51□□□□□ -1.85
NEB-201ENST00000172853 PDIA2Q13087 525 aaKnown RBP3.51□□□□□ -1.85
NEB-201ENST00000172853 RAP1GAP2Q684P5 730 aa3.51□□□□□ -1.85
NEB-201ENST00000172853 PSTKQ8IV42 348 aaKnown RBP3.51□□□□□ -1.85
NEB-201ENST00000172853 SYT15Q9BQS2 421 aa3.51□□□□□ -1.85
NEB-201ENST00000172853 EXD2Q9NVH0 621 aa3.51□□□□□ -1.85
NEB-201ENST00000172853 MTMR4Q9NYA4 1195 aa3.51□□□□□ -1.85
NEB-201ENST00000172853 ZNF180Q9UJW8 692 aa3.51□□□□□ -1.85
NEB-201ENST00000172853 PIK3C2GO75747 1445 aa3.51□□□□□ -1.85
NEB-201ENST00000172853 PTGES3LE9PB15 166 aa3.51□□□□□ -1.85
NEB-201ENST00000172853 RAD51BO15315 384 aa3.51□□□□□ -1.85
NEB-201ENST00000172853 HRGP04196 525 aa3.51□□□□□ -1.85
NEB-201ENST00000172853 ADD2P35612 726 aa3.51□□□□□ -1.85
NEB-201ENST00000172853 FDFT1P37268 417 aa3.51□□□□□ -1.85
NEB-201ENST00000172853 PRKAG1P54619 331 aa3.51□□□□□ -1.85
NEB-201ENST00000172853 FAM133BQ5BKY9 247 aaKnown RBP3.51□□□□□ -1.85
NEB-201ENST00000172853 MROH9Q5TGP6 573 aa3.51□□□□□ -1.85
NEB-201ENST00000172853 PPP2R2DQ66LE6 453 aa3.51□□□□□ -1.85
NEB-201ENST00000172853 TTC37Q6PGP7 1564 aa3.51□□□□□ -1.85
NEB-201ENST00000172853 CPNE2Q96FN4 548 aaPredicted RBP3.51□□□□□ -1.85
NEB-201ENST00000172853 PLEKHA1Q9HB21 404 aa3.51□□□□□ -1.85
NEB-201ENST00000172853 TMCO1Q9UM00 188 aa3.51□□□□□ -1.85
NEB-201ENST00000172853 AIM2O14862 343 aa3.51□□□□□ -1.85
NEB-201ENST00000172853 KRT34O76011 436 aa3.51□□□□□ -1.85
NEB-201ENST00000172853 ITGAVP06756 1048 aa3.51□□□□□ -1.85
NEB-201ENST00000172853 PRG2P13727 222 aa3.51□□□□□ -1.85
NEB-201ENST00000172853 TMED10P49755 219 aaKnown RBP3.51□□□□□ -1.85
NEB-201ENST00000172853 HHIPL2Q6UWX4 724 aa3.51□□□□□ -1.85
NEB-201ENST00000172853 TRAPPC5Q8IUR0 188 aa3.51□□□□□ -1.85
NEB-201ENST00000172853 C1orf216Q8TAB5 229 aa3.51□□□□□ -1.85
NEB-201ENST00000172853 PMM1Q92871 262 aa3.51□□□□□ -1.85
NEB-201ENST00000172853 RNF31Q96EP0 1072 aa3.51□□□□□ -1.85
NEB-201ENST00000172853 MTFR1LQ9H019 292 aa3.51□□□□□ -1.85
NEB-201ENST00000172853 SYCP2Q9BX26 1530 aa3.51□□□□□ -1.85
NEB-201ENST00000172853 CCDC195A0A1B0GUA6 201 aa3.51□□□□□ -1.85
NEB-201ENST00000172853 PLA2G6O60733 806 aa3.51□□□□□ -1.85
NEB-201ENST00000172853 TRIM49P0CI25 452 aa3.51□□□□□ -1.85
NEB-201ENST00000172853 TRIM49CP0CI26 452 aa3.51□□□□□ -1.85
NEB-201ENST00000172853 ENO3P13929 434 aaPredicted RBP3.51□□□□□ -1.85
NEB-201ENST00000172853 DEF8Q6ZN54 512 aa3.51□□□□□ -1.85
NEB-201ENST00000172853 OR10G6Q8NH81 332 aa3.51□□□□□ -1.85
NEB-201ENST00000172853 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP3.51□□□□□ -1.85
NEB-201ENST00000172853 PAK5Q9P286 719 aa3.51□□□□□ -1.85
NEB-201ENST00000172853 PSMD13Q9UNM6 376 aa3.51□□□□□ -1.85
NEB-201ENST00000172853 ARAP3Q8WWN8 1544 aa3.51□□□□□ -1.85
NEB-201ENST00000172853 NEURL1BA8MQ27 555 aa3.51□□□□□ -1.85
NEB-201ENST00000172853 TM7SF2O76062 418 aa3.51□□□□□ -1.85
NEB-201ENST00000172853 ACTR1AP61163 376 aa3.51□□□□□ -1.85
NEB-201ENST00000172853 MTMR2Q13614 643 aa3.51□□□□□ -1.85
NEB-201ENST00000172853 WDR72Q3MJ13 1102 aa3.51□□□□□ -1.85
NEB-201ENST00000172853 SCARA3Q6AZY7 606 aa3.51□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms