RNA–Protein interactions for RNA: ENST00000046640.7

CTNS-201, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTNS, Length 2,866 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-201ENST00000046640 PURAQ00577 322 aaKnown RBP13.48□□□□□ -0.25
CTNS-201ENST00000046640 ISLR2Q6UXK2 745 aa13.48□□□□□ -0.25
CTNS-201ENST00000046640 CELF6Q96J87 481 aaKnown RBP13.48□□□□□ -0.25
CTNS-201ENST00000046640 SMOQ99835 787 aa13.48□□□□□ -0.25
CTNS-201ENST00000046640 SYBUQ9NX95 663 aa13.48□□□□□ -0.25
CTNS-201ENST00000046640 KLHL8Q9P2G9 620 aaPredicted RBP13.48□□□□□ -0.25
CTNS-201ENST00000046640 SCOCQ9UIL1 159 aa13.48□□□□□ -0.25
CTNS-201ENST00000046640 INPP5FQ9Y2H2 1132 aa13.48□□□□□ -0.25
CTNS-201ENST00000046640 PRR5-ARHGAP8B1AHC4 643 aa13.47□□□□□ -0.25
CTNS-201ENST00000046640 HAS3O00219 553 aa13.47□□□□□ -0.25
CTNS-201ENST00000046640 KRT38O76015 456 aa13.47□□□□□ -0.25
CTNS-201ENST00000046640 SORBS2O94875 1100 aaKnown RBP13.47□□□□□ -0.25
CTNS-201ENST00000046640 DHRS4L1P0CG22 281 aa13.47□□□□□ -0.25
CTNS-201ENST00000046640 TSHRP16473 764 aa13.47□□□□□ -0.25
CTNS-201ENST00000046640 ERCC2P18074 760 aa13.47□□□□□ -0.25
CTNS-201ENST00000046640 ARHGAP8P85298 464 aa13.47□□□□□ -0.25
CTNS-201ENST00000046640 PPM1JQ5JR12 505 aa13.47□□□□□ -0.25
CTNS-201ENST00000046640 LGSNQ5TDP6 509 aa13.47□□□□□ -0.25
CTNS-201ENST00000046640 AP1ARQ63HQ0 302 aa13.47□□□□□ -0.25
CTNS-201ENST00000046640 HACE1Q8IYU2 909 aa13.47□□□□□ -0.25
CTNS-201ENST00000046640 MCUQ8NE86 351 aa13.47□□□□□ -0.25
CTNS-201ENST00000046640 OR52K1Q8NGK4 314 aa13.47□□□□□ -0.25
CTNS-201ENST00000046640 ZNF398Q8TD17 642 aa13.47□□□□□ -0.25
CTNS-201ENST00000046640 OLFM3Q96PB7 478 aa13.47□□□□□ -0.25
CTNS-201ENST00000046640 PPP1R10Q96QC0 940 aaKnown RBP13.47□□□□□ -0.25
CTNS-201ENST00000046640 NPY6RQ99463 290 aa13.47□□□□□ -0.25
CTNS-201ENST00000046640 FAM124BQ9H5Z6 455 aaPredicted RBP13.47□□□□□ -0.25
CTNS-201ENST00000046640 PNPLA8Q9NP80 782 aa13.47□□□□□ -0.25
CTNS-201ENST00000046640 PAPOLBQ9NRJ5 636 aaKnown RBP13.47□□□□□ -0.25
CTNS-201ENST00000046640 PCDHA11Q9Y5I1 949 aa13.47□□□□□ -0.25
CTNS-201ENST00000046640 NUP205Q92621 2012 aa13.47□□□□□ -0.25
CTNS-201ENST00000046640 F8W810 466 aa13.47□□□□□ -0.25
CTNS-201ENST00000046640 GOLGA8TH3BQL2 631 aa13.47□□□□□ -0.25
CTNS-201ENST00000046640 TPH1P17752 444 aa13.47□□□□□ -0.25
CTNS-201ENST00000046640 WARSP23381 471 aaKnown RBP13.47□□□□□ -0.25
CTNS-201ENST00000046640 NUMBP49757 651 aa13.47□□□□□ -0.25
CTNS-201ENST00000046640 PGGT1BP53609 377 aa13.47□□□□□ -0.25
CTNS-201ENST00000046640 WASHC5Q12768 1159 aa13.47□□□□□ -0.25
CTNS-201ENST00000046640 SEMA5AQ13591 1074 aa13.47□□□□□ -0.25
CTNS-201ENST00000046640 C1orf146Q5VVC0 180 aa13.47□□□□□ -0.25
CTNS-201ENST00000046640 RIPOR1Q6ZS17 1223 aa13.47□□□□□ -0.25
CTNS-201ENST00000046640 STKLD1Q8NE28 680 aa13.47□□□□□ -0.25
CTNS-201ENST00000046640 ZMIZ2Q8NF64 920 aa13.47□□□□□ -0.25
CTNS-201ENST00000046640 SH3TC2Q8TF17 1288 aa13.47□□□□□ -0.25
CTNS-201ENST00000046640 AZIN2Q96A70 460 aa13.47□□□□□ -0.25
CTNS-201ENST00000046640 VCXQ9H320 206 aa13.47□□□□□ -0.25
CTNS-201ENST00000046640 FAM105AQ9NUU6 356 aa13.47□□□□□ -0.25
CTNS-201ENST00000046640 NUDT5Q9UKK9 219 aa13.47□□□□□ -0.25
CTNS-201ENST00000046640 STAP1Q9ULZ2 295 aa13.47□□□□□ -0.25
CTNS-201ENST00000046640 TRDMT1O14717 391 aaKnown RBP13.46□□□□□ -0.25
CTNS-201ENST00000046640 TNPO2O14787 897 aaKnown RBP13.46□□□□□ -0.25
CTNS-201ENST00000046640 SRGAP2BP0DMP2 458 aa13.46□□□□□ -0.25
CTNS-201ENST00000046640 KCNA4P22459 653 aa13.46□□□□□ -0.25
CTNS-201ENST00000046640 MAGEA3P43357 314 aa13.46□□□□□ -0.25
CTNS-201ENST00000046640 BRCC3P46736 316 aa13.46□□□□□ -0.25
CTNS-201ENST00000046640 EPHB1P54762 984 aa13.46□□□□□ -0.25
CTNS-201ENST00000046640 PEX6Q13608 980 aa13.46□□□□□ -0.25
CTNS-201ENST00000046640 XKR4Q5GH76 650 aa13.46□□□□□ -0.25
CTNS-201ENST00000046640 GDF6Q6KF10 455 aaPredicted RBP13.46□□□□□ -0.25
CTNS-201ENST00000046640 SLC30A9Q6PML9 568 aa13.46□□□□□ -0.25
CTNS-201ENST00000046640 IZUMO2Q6UXV1 221 aa13.46□□□□□ -0.25
CTNS-201ENST00000046640 RSPH3Q86UC2 560 aa13.46□□□□□ -0.25
CTNS-201ENST00000046640 SCUBE1Q8IWY4 988 aa13.46□□□□□ -0.25
CTNS-201ENST00000046640 TOP6BLQ8N6T0 577 aa13.46□□□□□ -0.25
CTNS-201ENST00000046640 NPWQ8N729 165 aa13.46□□□□□ -0.25
CTNS-201ENST00000046640 USP33Q8TEY7 942 aa13.46□□□□□ -0.25
CTNS-201ENST00000046640 RNF34Q969K3 372 aa13.46□□□□□ -0.25
CTNS-201ENST00000046640 FAM136AQ96C01 138 aa13.46□□□□□ -0.25
CTNS-201ENST00000046640 CCDC124Q96CT7 223 aaKnown RBP13.46□□□□□ -0.25
CTNS-201ENST00000046640 SIK2Q9H0K1 926 aa13.46□□□□□ -0.25
CTNS-201ENST00000046640 LRCH1Q9Y2L9 728 aa13.46□□□□□ -0.25
CTNS-201ENST00000046640 SDR42E2A6NKP2 422 aa13.46□□□□□ -0.25
CTNS-201ENST00000046640 FAM159BA6NKW6 160 aa13.46□□□□□ -0.25
CTNS-201ENST00000046640 M0QZ92 97 aa13.46□□□□□ -0.25
CTNS-201ENST00000046640 ATP9BO43861 1147 aa13.46□□□□□ -0.25
CTNS-201ENST00000046640 DAB1O75553 588 aa13.46□□□□□ -0.25
CTNS-201ENST00000046640 THP07101 528 aa13.46□□□□□ -0.25
CTNS-201ENST00000046640 ADRA1BP35368 520 aa13.46□□□□□ -0.25
CTNS-201ENST00000046640 SLC25A3Q00325 362 aa13.46□□□□□ -0.25
CTNS-201ENST00000046640 FAM35AQ86V20 835 aa13.46□□□□□ -0.25
CTNS-201ENST00000046640 DNAAF3Q8N9W5 541 aa13.46□□□□□ -0.25
CTNS-201ENST00000046640 PANX3Q96QZ0 392 aa13.46□□□□□ -0.25
CTNS-201ENST00000046640 AGO3Q9H9G7 860 aaKnown RBP13.46□□□□□ -0.25
CTNS-201ENST00000046640 CYP4F11Q9HBI6 524 aa13.46□□□□□ -0.25
CTNS-201ENST00000046640 XAB2Q9HCS7 855 aaKnown RBP13.46□□□□□ -0.25
CTNS-201ENST00000046640 ZNF358Q9NW07 568 aa13.46□□□□□ -0.25
CTNS-201ENST00000046640 ARL5CA6NH57 179 aa13.46□□□□□ -0.26
CTNS-201ENST00000046640 TPP1O14773 563 aa13.46□□□□□ -0.26
CTNS-201ENST00000046640 B3GAT3O94766 335 aa13.46□□□□□ -0.26
CTNS-201ENST00000046640 TPSB2P20231 275 aa13.46□□□□□ -0.26
CTNS-201ENST00000046640 BDNFP23560 247 aa13.46□□□□□ -0.26
CTNS-201ENST00000046640 MAGEA6P43360 314 aa13.46□□□□□ -0.26
CTNS-201ENST00000046640 RPL34P49207 117 aaKnown RBP13.46□□□□□ -0.26
CTNS-201ENST00000046640 TPI1P60174 286 aa13.46□□□□□ -0.26
CTNS-201ENST00000046640 RPL10AP62906 217 aaKnown RBP13.46□□□□□ -0.26
CTNS-201ENST00000046640 PDE1BQ01064 536 aa13.46□□□□□ -0.26
CTNS-201ENST00000046640 TPSAB1Q15661 275 aa13.46□□□□□ -0.26
CTNS-201ENST00000046640 TIGD5Q53EQ6 642 aa13.46□□□□□ -0.26
CTNS-201ENST00000046640 PYDC1Q8WXC3 89 aa13.46□□□□□ -0.26
CTNS-201ENST00000046640 ARNTL2Q8WYA1 636 aa13.46□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms