RNA–Protein interactions for RNA: ENSMUST00000201549.3

Scn8a-213, Transcript of Sodium channel protein type 8 subunit alpha, mousemouse

APPRIS P5 TSL 5 BASIC

Gene Scn8a, Length 7,120 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scn8a-213ENSMUST00000201549 Bcl10Q9Z0H7 233 aa9.41□□□□□ -0.9
Scn8a-213ENSMUST00000201549 Smok3aC0HKC8 504 aa9.41□□□□□ -0.9
Scn8a-213ENSMUST00000201549 Smok3bC0HKC9 504 aa9.41□□□□□ -0.9
Scn8a-213ENSMUST00000201549 Olfr726E9Q8X3 321 aa9.41□□□□□ -0.9
Scn8a-213ENSMUST00000201549 Tpst1O70281 370 aa9.41□□□□□ -0.9
Scn8a-213ENSMUST00000201549 UgcgO88693 394 aa9.41□□□□□ -0.9
Scn8a-213ENSMUST00000201549 Jak1P52332 1153 aa9.41□□□□□ -0.9
Scn8a-213ENSMUST00000201549 Arf3P61205 181 aa9.41□□□□□ -0.9
Scn8a-213ENSMUST00000201549 Tbx3P70324 741 aa9.41□□□□□ -0.9
Scn8a-213ENSMUST00000201549 Arf1P84078 181 aa9.41□□□□□ -0.9
Scn8a-213ENSMUST00000201549 Olfr725Q05A45 321 aa9.41□□□□□ -0.9
Scn8a-213ENSMUST00000201549 Grid2ipQ0QWG9 1203 aa9.41□□□□□ -0.9
Scn8a-213ENSMUST00000201549 Zfp953Q3UPV7 304 aa9.41□□□□□ -0.9
Scn8a-213ENSMUST00000201549 Coq8aQ60936 645 aa9.41□□□□□ -0.9
Scn8a-213ENSMUST00000201549 IgflQ6B9Z0 140 aa9.41□□□□□ -0.9
Scn8a-213ENSMUST00000201549 Q8BL95 290 aa9.41□□□□□ -0.9
Scn8a-213ENSMUST00000201549 Lsm14aQ8K2F8 462 aaKnown RBP9.41□□□□□ -0.9
Scn8a-213ENSMUST00000201549 Dennd1aQ8K382 1016 aa9.41□□□□□ -0.9
Scn8a-213ENSMUST00000201549 Tspan14Q8QZY6 270 aa9.41□□□□□ -0.9
Scn8a-213ENSMUST00000201549 Kdelr1Q99JH8 212 aa9.41□□□□□ -0.9
Scn8a-213ENSMUST00000201549 Cdkl2Q9QUK0 568 aa9.41□□□□□ -0.9
Scn8a-213ENSMUST00000201549 Hey2Q9QUS4 339 aa9.41□□□□□ -0.9
Scn8a-213ENSMUST00000201549 Tbc1d16A2ABG4 766 aa9.41□□□□□ -0.9
Scn8a-213ENSMUST00000201549 2610008E11RikG3X964 669 aa9.41□□□□□ -0.9
Scn8a-213ENSMUST00000201549 Dcpp3L7N259 170 aa9.41□□□□□ -0.9
Scn8a-213ENSMUST00000201549 Fgfr2P21803 821 aa9.41□□□□□ -0.9
Scn8a-213ENSMUST00000201549 Tgm2P21981 686 aaKnown RBP9.41□□□□□ -0.9
Scn8a-213ENSMUST00000201549 Serpina1eQ00898 413 aa9.41□□□□□ -0.9
Scn8a-213ENSMUST00000201549 Gpd1lQ3ULJ0 351 aa9.41□□□□□ -0.9
Scn8a-213ENSMUST00000201549 Akap14Q3V0I7 536 aa9.41□□□□□ -0.9
Scn8a-213ENSMUST00000201549 Trim67Q505D9 768 aa9.41□□□□□ -0.9
Scn8a-213ENSMUST00000201549 Cyb5d1Q5NCY3 228 aa9.41□□□□□ -0.9
Scn8a-213ENSMUST00000201549 Frmd5Q6P5H6 517 aa9.41□□□□□ -0.9
Scn8a-213ENSMUST00000201549 Glra2Q7TNC8 452 aa9.41□□□□□ -0.9
Scn8a-213ENSMUST00000201549 Mcoln2Q8K595 566 aa9.41□□□□□ -0.9
Scn8a-213ENSMUST00000201549 Cadm1Q8R5M8 456 aaKnown RBP9.41□□□□□ -0.9
Scn8a-213ENSMUST00000201549 Rpn2Q9DBG6 631 aaKnown RBP9.41□□□□□ -0.9
Scn8a-213ENSMUST00000201549 Gpc1Q9QZF2 557 aa9.41□□□□□ -0.9
Scn8a-213ENSMUST00000201549 Cd97Q9Z0M6 818 aa9.41□□□□□ -0.9
Scn8a-213ENSMUST00000201549 Hmgb3O54879 200 aaKnown RBP9.41□□□□□ -0.9
Scn8a-213ENSMUST00000201549 Psma3O70435 255 aa9.41□□□□□ -0.9
Scn8a-213ENSMUST00000201549 Ddr1Q03146 911 aa9.41□□□□□ -0.9
Scn8a-213ENSMUST00000201549 Pih1d3Q3KNI6 218 aa9.41□□□□□ -0.9
Scn8a-213ENSMUST00000201549 Usp39Q3TIX9 564 aa9.41□□□□□ -0.9
Scn8a-213ENSMUST00000201549 Slc17a7Q3TXX4 560 aa9.41□□□□□ -0.9
Scn8a-213ENSMUST00000201549 Olfr212Q7TS33 327 aa9.41□□□□□ -0.9
Scn8a-213ENSMUST00000201549 Fbxo38Q8BMI0 1194 aa9.41□□□□□ -0.9
Scn8a-213ENSMUST00000201549 Q8BP99 230 aa9.41□□□□□ -0.9
Scn8a-213ENSMUST00000201549 Fam151aQ8QZW3 608 aa9.41□□□□□ -0.9
Scn8a-213ENSMUST00000201549 Csde1Q91W50 798 aaKnown RBP9.41□□□□□ -0.9
Scn8a-213ENSMUST00000201549 Vangl2Q91ZD4 521 aa9.41□□□□□ -0.9
Scn8a-213ENSMUST00000201549 Ergic2Q9CR89 377 aa9.41□□□□□ -0.9
Scn8a-213ENSMUST00000201549 Borcs6Q9D6W8 360 aa9.41□□□□□ -0.9
Scn8a-213ENSMUST00000201549 PgdQ9DCD0 483 aa9.41□□□□□ -0.9
Scn8a-213ENSMUST00000201549 Gm36028A0A0U1RPM1 299 aa9.41□□□□□ -0.9
Scn8a-213ENSMUST00000201549 Sh3pxd2bA2AAY5 908 aa9.41□□□□□ -0.9
Scn8a-213ENSMUST00000201549 AfpP02772 605 aa9.41□□□□□ -0.9
Scn8a-213ENSMUST00000201549 Nr3c1P06537 783 aa9.41□□□□□ -0.9
Scn8a-213ENSMUST00000201549 Il1rapl1P59823 695 aa9.41□□□□□ -0.9
Scn8a-213ENSMUST00000201549 Gal3st3P61315 431 aa9.41□□□□□ -0.9
Scn8a-213ENSMUST00000201549 HpcaP84075 193 aa9.41□□□□□ -0.9
Scn8a-213ENSMUST00000201549 Slc9b1Q8C0X2 565 aa9.41□□□□□ -0.9
Scn8a-213ENSMUST00000201549 DnerQ8JZM4 737 aa9.41□□□□□ -0.9
Scn8a-213ENSMUST00000201549 Pqbp1Q91VJ5 263 aaKnown RBP9.41□□□□□ -0.9
Scn8a-213ENSMUST00000201549 FopnlQ9CZS3 174 aa9.41□□□□□ -0.9
Scn8a-213ENSMUST00000201549 Copg1Q9QZE5 874 aa9.41□□□□□ -0.9
Scn8a-213ENSMUST00000201549 Trim30bE9PVL6 203 aa9.4□□□□□ -0.9
Scn8a-213ENSMUST00000201549 Pknox1O70477 436 aa9.4□□□□□ -0.9
Scn8a-213ENSMUST00000201549 Hoxb8P09632 243 aa9.4□□□□□ -0.9
Scn8a-213ENSMUST00000201549 Fgfr1P16092 822 aa9.4□□□□□ -0.9
Scn8a-213ENSMUST00000201549 Nr2c2P49117 596 aa9.4□□□□□ -0.9
Scn8a-213ENSMUST00000201549 Timm8bP62077 83 aaKnown RBP9.4□□□□□ -0.9
Scn8a-213ENSMUST00000201549 Tmc5Q32NZ6 967 aa9.4□□□□□ -0.9
Scn8a-213ENSMUST00000201549 Klhdc9Q3USL1 350 aa9.4□□□□□ -0.9
Scn8a-213ENSMUST00000201549 Gm5431Q5NCB3 844 aa9.4□□□□□ -0.9
Scn8a-213ENSMUST00000201549 Olfr297Q7TS07 310 aa9.4□□□□□ -0.9
Scn8a-213ENSMUST00000201549 BfarQ8R079 450 aa9.4□□□□□ -0.9
Scn8a-213ENSMUST00000201549 MyocdQ8VIM5 935 aa9.4□□□□□ -0.9
Scn8a-213ENSMUST00000201549 Khdc3Q9CWU5 440 aa9.4□□□□□ -0.9
Scn8a-213ENSMUST00000201549 Tnfaip8l2Q9D8Y7 184 aa9.4□□□□□ -0.9
Scn8a-213ENSMUST00000201549 Olfr1123A2AT85 323 aa9.4□□□□□ -0.9
Scn8a-213ENSMUST00000201549 Gm5930D3Z257 264 aa9.4□□□□□ -0.9
Scn8a-213ENSMUST00000201549 Gsta1P13745 223 aa9.4□□□□□ -0.9
Scn8a-213ENSMUST00000201549 PrkcdP28867 674 aa9.4□□□□□ -0.9
Scn8a-213ENSMUST00000201549 Hnf4aP49698 474 aa9.4□□□□□ -0.9
Scn8a-213ENSMUST00000201549 Creb1Q01147 341 aaKnown RBP9.4□□□□□ -0.9
Scn8a-213ENSMUST00000201549 RadilQ69Z89 1099 aa9.4□□□□□ -0.9
Scn8a-213ENSMUST00000201549 Gsta1Q6P8Q0 223 aa9.4□□□□□ -0.9
Scn8a-213ENSMUST00000201549 Hspa13Q8BM72 471 aa9.4□□□□□ -0.9
Scn8a-213ENSMUST00000201549 GsdmcQ99NB5 468 aa9.4□□□□□ -0.9
Scn8a-213ENSMUST00000201549 Rassf3Q99P51 232 aa9.4□□□□□ -0.9
Scn8a-213ENSMUST00000201549 Ndufb5Q9CQH3 189 aa9.4□□□□□ -0.9
Scn8a-213ENSMUST00000201549 Q9D4A5 307 aa9.4□□□□□ -0.9
Scn8a-213ENSMUST00000201549 Znfx1Q8R151 1909 aaKnown RBP9.4□□□□□ -0.9
Scn8a-213ENSMUST00000201549 Traf2P39429 501 aa9.4□□□□□ -0.9
Scn8a-213ENSMUST00000201549 CamkvQ3UHL1 512 aa9.4□□□□□ -0.9
Scn8a-213ENSMUST00000201549 Rrm2bQ6PEE3 351 aa9.4□□□□□ -0.9
Scn8a-213ENSMUST00000201549 Moxd2Q7TT41 619 aa9.4□□□□□ -0.9
Scn8a-213ENSMUST00000201549 FsbpQ8BKE5 299 aa9.4□□□□□ -0.9
Scn8a-213ENSMUST00000201549 MispQ9D279 648 aa9.4□□□□□ -0.9
Retrieved 100 of 22,080 RNA–protein pairs in 32.1 ms