RNA–Protein interactions for RNA: ENSMUST00000182047.1

Rnf4-204, Transcript of E3 ubiquitin-protein ligase RNF4, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Rnf4, Length 2,944 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf4-204ENSMUST00000182047 Fam171bQ14CH0 825 aa13.76□□□□□ -0.21
Rnf4-204ENSMUST00000182047 Plcl1Q3USB7 1096 aa13.76□□□□□ -0.21
Rnf4-204ENSMUST00000182047 Ampd1Q3V1D3 745 aa13.76□□□□□ -0.21
Rnf4-204ENSMUST00000182047 Cyp3a13Q64464 503 aa13.76□□□□□ -0.21
Rnf4-204ENSMUST00000182047 Prrt3Q6PE13 971 aa13.76□□□□□ -0.21
Rnf4-204ENSMUST00000182047 Kcns3Q8BQZ8 491 aa13.76□□□□□ -0.21
Rnf4-204ENSMUST00000182047 Rd3Q8BRE0 195 aa13.76□□□□□ -0.21
Rnf4-204ENSMUST00000182047 Csnk1g1Q8BTH8 459 aa13.76□□□□□ -0.21
Rnf4-204ENSMUST00000182047 Cpsf7Q8BTV2 471 aaKnown RBP13.76□□□□□ -0.21
Rnf4-204ENSMUST00000182047 Pdik1lQ8QZR7 341 aa13.76□□□□□ -0.21
Rnf4-204ENSMUST00000182047 Hip1Q8VD75 1029 aaKnown RBP13.76□□□□□ -0.21
Rnf4-204ENSMUST00000182047 Trim66Q924W6 1242 aa13.76□□□□□ -0.21
Rnf4-204ENSMUST00000182047 GhdcQ99J23 532 aa13.76□□□□□ -0.21
Rnf4-204ENSMUST00000182047 Raver1Q9CW46 748 aaKnown RBP13.76□□□□□ -0.21
Rnf4-204ENSMUST00000182047 Ddit4Q9D3F7 229 aa13.76□□□□□ -0.21
Rnf4-204ENSMUST00000182047 Tspan17Q9D7W4 270 aa13.76□□□□□ -0.21
Rnf4-204ENSMUST00000182047 Atp6v1c1Q9Z1G3 382 aa13.76□□□□□ -0.21
Rnf4-204ENSMUST00000182047 Znf536Q8K083 1302 aa13.76□□□□□ -0.21
Rnf4-204ENSMUST00000182047 Pcdh7A0A0A6YY83 1255 aa13.76□□□□□ -0.21
Rnf4-204ENSMUST00000182047 Gm21293E9Q4G9 266 aa13.76□□□□□ -0.21
Rnf4-204ENSMUST00000182047 Ptger1P35375 405 aa13.76□□□□□ -0.21
Rnf4-204ENSMUST00000182047 InhbaQ04998 424 aa13.76□□□□□ -0.21
Rnf4-204ENSMUST00000182047 Tekt4Q149S1 447 aa13.76□□□□□ -0.21
Rnf4-204ENSMUST00000182047 Ripor1Q68FE6 1223 aa13.76□□□□□ -0.21
Rnf4-204ENSMUST00000182047 N4bp1Q6A037 893 aa13.76□□□□□ -0.21
Rnf4-204ENSMUST00000182047 Btbd10Q80X66 475 aa13.76□□□□□ -0.21
Rnf4-204ENSMUST00000182047 Cdkn3Q810P3 211 aa13.76□□□□□ -0.21
Rnf4-204ENSMUST00000182047 Fam163bQ8BUM6 167 aa13.76□□□□□ -0.21
Rnf4-204ENSMUST00000182047 Wdr59Q8C0M0 992 aa13.76□□□□□ -0.21
Rnf4-204ENSMUST00000182047 Xrn2Q9DBR1 951 aaKnown RBP13.76□□□□□ -0.21
Rnf4-204ENSMUST00000182047 Rab13Q9DD03 202 aa13.76□□□□□ -0.21
Rnf4-204ENSMUST00000182047 PodxlQ9R0M4 503 aa13.76□□□□□ -0.21
Rnf4-204ENSMUST00000182047 Bmp15Q9Z0L4 392 aa13.76□□□□□ -0.21
Rnf4-204ENSMUST00000182047 Akap17bA2A3V1 959 aa13.75□□□□□ -0.21
Rnf4-204ENSMUST00000182047 Klhl41A2AUC9 606 aa13.75□□□□□ -0.21
Rnf4-204ENSMUST00000182047 Gm16430A6X8J1 155 aa13.75□□□□□ -0.21
Rnf4-204ENSMUST00000182047 Adamts6D3Z1A5 1117 aa13.75□□□□□ -0.21
Rnf4-204ENSMUST00000182047 Grip2G3XA20 1042 aa13.75□□□□□ -0.21
Rnf4-204ENSMUST00000182047 Gm379J3QQ19 296 aa13.75□□□□□ -0.21
Rnf4-204ENSMUST00000182047 Gm3424L7N298 263 aa13.75□□□□□ -0.21
Rnf4-204ENSMUST00000182047 Gm8246M0QWX9 263 aa13.75□□□□□ -0.21
Rnf4-204ENSMUST00000182047 Chrm1P12657 460 aa13.75□□□□□ -0.21
Rnf4-204ENSMUST00000182047 Gnat1P20612 350 aa13.75□□□□□ -0.21
Rnf4-204ENSMUST00000182047 Slc24a2Q14BI1 711 aa13.75□□□□□ -0.21
Rnf4-204ENSMUST00000182047 B3gntl1Q3U129 357 aa13.75□□□□□ -0.21
Rnf4-204ENSMUST00000182047 Rap1gap2Q5SVL6 712 aaKnown RBP13.75□□□□□ -0.21
Rnf4-204ENSMUST00000182047 Aldh1a2Q62148 518 aa13.75□□□□□ -0.21
Rnf4-204ENSMUST00000182047 MregQ6NVG5 214 aa13.75□□□□□ -0.21
Rnf4-204ENSMUST00000182047 Tatdn1Q6P8M1 295 aa13.75□□□□□ -0.21
Rnf4-204ENSMUST00000182047 Zfp512bQ6PHP4 879 aa13.75□□□□□ -0.21
Rnf4-204ENSMUST00000182047 Znf365Q8BG89 408 aa13.75□□□□□ -0.21
Rnf4-204ENSMUST00000182047 Znf426Q8R1D1 550 aa13.75□□□□□ -0.21
Rnf4-204ENSMUST00000182047 Smim14Q91VT8 99 aa13.75□□□□□ -0.21
Rnf4-204ENSMUST00000182047 B3galt6Q91Z92 325 aa13.75□□□□□ -0.21
Rnf4-204ENSMUST00000182047 Nt5c3aQ9D020 331 aa13.75□□□□□ -0.21
Rnf4-204ENSMUST00000182047 Mphosph6Q9D1Q1 161 aa13.75□□□□□ -0.21
Rnf4-204ENSMUST00000182047 Slxl1Q9D515 155 aa13.75□□□□□ -0.21
Rnf4-204ENSMUST00000182047 Ppp1r12aQ9DBR7 1029 aaKnown RBP13.75□□□□□ -0.21
Rnf4-204ENSMUST00000182047 Plscr2Q9DCW2 307 aa13.75□□□□□ -0.21
Rnf4-204ENSMUST00000182047 Ccdc22Q9JIG7 627 aa13.75□□□□□ -0.21
Rnf4-204ENSMUST00000182047 Gm8113E0CXS8 587 aa13.75□□□□□ -0.21
Rnf4-204ENSMUST00000182047 Krt90E9Q1Z0 538 aa13.75□□□□□ -0.21
Rnf4-204ENSMUST00000182047 FancfE9Q5Z5 343 aa13.75□□□□□ -0.21
Rnf4-204ENSMUST00000182047 Pate1E9Q658 125 aa13.75□□□□□ -0.21
Rnf4-204ENSMUST00000182047 Axin1O35625 863 aa13.75□□□□□ -0.21
Rnf4-204ENSMUST00000182047 Ccnb1P24860 430 aa13.75□□□□□ -0.21
Rnf4-204ENSMUST00000182047 Psma2P49722 234 aa13.75□□□□□ -0.21
Rnf4-204ENSMUST00000182047 Vps45P97390 570 aa13.75□□□□□ -0.21
Rnf4-204ENSMUST00000182047 Rimbp2Q80U40 1072 aa13.75□□□□□ -0.21
Rnf4-204ENSMUST00000182047 Mis18bp1Q80WQ8 998 aa13.75□□□□□ -0.21
Rnf4-204ENSMUST00000182047 Zfp454Q80Y34 536 aa13.75□□□□□ -0.21
Rnf4-204ENSMUST00000182047 Rps6kc1Q8BLK9 1056 aa13.75□□□□□ -0.21
Rnf4-204ENSMUST00000182047 Prr33Q8C494 260 aa13.75□□□□□ -0.21
Rnf4-204ENSMUST00000182047 Ccdc159Q8C963 411 aa13.75□□□□□ -0.21
Rnf4-204ENSMUST00000182047 Mkl1Q8K4J6 964 aa13.75□□□□□ -0.21
Rnf4-204ENSMUST00000182047 CtbsQ8R242 366 aa13.75□□□□□ -0.21
Rnf4-204ENSMUST00000182047 Vwa1Q8R2Z5 415 aa13.75□□□□□ -0.21
Rnf4-204ENSMUST00000182047 PlvapQ91VC4 438 aa13.75□□□□□ -0.21
Rnf4-204ENSMUST00000182047 FdpsQ920E5 353 aa13.75□□□□□ -0.21
Rnf4-204ENSMUST00000182047 Gimap3Q99MI6 301 aa13.75□□□□□ -0.21
Rnf4-204ENSMUST00000182047 Trem2Q99NH8 227 aa13.75□□□□□ -0.21
Rnf4-204ENSMUST00000182047 Tubd1Q9R1K7 455 aa13.75□□□□□ -0.21
Rnf4-204ENSMUST00000182047 PcntP48725 2898 aa13.74□□□□□ -0.21
Rnf4-204ENSMUST00000182047 Gm5160F8VPN3 147 aa13.74□□□□□ -0.21
Rnf4-204ENSMUST00000182047 Lzts1P60853 599 aa13.74□□□□□ -0.21
Rnf4-204ENSMUST00000182047 S100a5P63084 93 aa13.74□□□□□ -0.21
Rnf4-204ENSMUST00000182047 Msx3P70354 204 aa13.74□□□□□ -0.21
Rnf4-204ENSMUST00000182047 Hhla1Q3TYV2 514 aa13.74□□□□□ -0.21
Rnf4-204ENSMUST00000182047 Usp1Q8BJQ2 784 aa13.74□□□□□ -0.21
Rnf4-204ENSMUST00000182047 Ldhal6bQ8BVP2 382 aa13.74□□□□□ -0.21
Rnf4-204ENSMUST00000182047 GancQ8BVW0 898 aa13.74□□□□□ -0.21
Rnf4-204ENSMUST00000182047 Eif2b5Q8CHW4 717 aa13.74□□□□□ -0.21
Rnf4-204ENSMUST00000182047 Tgif2lx2Q8K5B9 231 aa13.74□□□□□ -0.21
Rnf4-204ENSMUST00000182047 Fam151aQ8QZW3 608 aa13.74□□□□□ -0.21
Rnf4-204ENSMUST00000182047 Sh3d19Q91X43 789 aa13.74□□□□□ -0.21
Rnf4-204ENSMUST00000182047 PigxQ99LV7 254 aa13.74□□□□□ -0.21
Rnf4-204ENSMUST00000182047 Sytl1Q99N80 567 aa13.74□□□□□ -0.21
Rnf4-204ENSMUST00000182047 Tmco5aQ9D9D5 303 aa13.74□□□□□ -0.21
Rnf4-204ENSMUST00000182047 Arid3bQ9Z1N7 568 aa13.74□□□□□ -0.21
Rnf4-204ENSMUST00000182047 Speer3W4VSP1 261 aa13.74□□□□□ -0.21
Retrieved 100 of 22,080 RNA–protein pairs in 75.5 ms