RNA–Protein interactions for RNA: ENSMUST00000113706.9

Trim39-203, Transcript of E3 ubiquitin-protein ligase TRIM39, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim39, Length 3,204 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim39-203ENSMUST00000113706 Mon1aQ6PDG8 556 aa16.29■□□□□ 0.2
Trim39-203ENSMUST00000113706 Sytl5Q80T23 753 aa16.29■□□□□ 0.2
Trim39-203ENSMUST00000113706 Zfp454Q80Y34 536 aa16.29■□□□□ 0.2
Trim39-203ENSMUST00000113706 Xylt1Q811B1 953 aa16.29■□□□□ 0.2
Trim39-203ENSMUST00000113706 Trpa1Q8BLA8 1125 aa16.29■□□□□ 0.2
Trim39-203ENSMUST00000113706 Ctxn3Q8BXZ0 80 aa16.29■□□□□ 0.2
Trim39-203ENSMUST00000113706 Afap1l1Q8BZI0 768 aa16.29■□□□□ 0.2
Trim39-203ENSMUST00000113706 Syn3Q8JZP2 579 aa16.29■□□□□ 0.2
Trim39-203ENSMUST00000113706 D8Ertd738eQ8R1F0 94 aa16.29■□□□□ 0.2
Trim39-203ENSMUST00000113706 C1qtnf12Q8R2Z0 308 aa16.29■□□□□ 0.2
Trim39-203ENSMUST00000113706 Evi2bQ8VD58 444 aa16.29■□□□□ 0.2
Trim39-203ENSMUST00000113706 Trim66Q924W6 1242 aa16.29■□□□□ 0.2
Trim39-203ENSMUST00000113706 Ophn1Q99J31 802 aa16.29■□□□□ 0.2
Trim39-203ENSMUST00000113706 Olfr711Q9EPG2 314 aa16.29■□□□□ 0.2
Trim39-203ENSMUST00000113706 SgshQ9EQ08 502 aa16.29■□□□□ 0.2
Trim39-203ENSMUST00000113706 Adrm1Q9JKV1 407 aa16.29■□□□□ 0.2
Trim39-203ENSMUST00000113706 Capn15Q9JLG8 1095 aa16.29■□□□□ 0.2
Trim39-203ENSMUST00000113706 Cyp4a12bA2A974 508 aa16.29■□□□□ 0.2
Trim39-203ENSMUST00000113706 Olfr1022L7MTT3 315 aa16.29■□□□□ 0.2
Trim39-203ENSMUST00000113706 B3gntl1Q3U129 357 aa16.29■□□□□ 0.2
Trim39-203ENSMUST00000113706 Nab1Q61122 486 aa16.29■□□□□ 0.2
Trim39-203ENSMUST00000113706 Shkbp1Q6P7W2 704 aa16.29■□□□□ 0.2
Trim39-203ENSMUST00000113706 Trim62Q80V85 475 aa16.29■□□□□ 0.2
Trim39-203ENSMUST00000113706 Rd3Q8BRE0 195 aa16.29■□□□□ 0.2
Trim39-203ENSMUST00000113706 4921504E06RikQ8CET2 560 aa16.29■□□□□ 0.2
Trim39-203ENSMUST00000113706 Sept8Q8CHH9 429 aa16.29■□□□□ 0.2
Trim39-203ENSMUST00000113706 Fbxo21Q8VDH1 627 aa16.29■□□□□ 0.2
Trim39-203ENSMUST00000113706 Cyp4a12aQ91WL5 508 aa16.29■□□□□ 0.2
Trim39-203ENSMUST00000113706 Abcg3Q99P81 650 aa16.29■□□□□ 0.2
Trim39-203ENSMUST00000113706 Trmt11Q9CWH5 460 aa16.29■□□□□ 0.2
Trim39-203ENSMUST00000113706 Rfc5Q9D0F6 339 aa16.29■□□□□ 0.2
Trim39-203ENSMUST00000113706 Atad1Q9D5T0 361 aa16.29■□□□□ 0.2
Trim39-203ENSMUST00000113706 Zfp612A0A1D5RMC2 672 aa16.28■□□□□ 0.2
Trim39-203ENSMUST00000113706 BC024978J3QPC3 361 aa16.28■□□□□ 0.2
Trim39-203ENSMUST00000113706 Slc26a1P58735 704 aa16.28■□□□□ 0.2
Trim39-203ENSMUST00000113706 Il1rapl1P59823 695 aa16.28■□□□□ 0.2
Trim39-203ENSMUST00000113706 Usp46P62069 366 aa16.28■□□□□ 0.2
Trim39-203ENSMUST00000113706 Cdk16Q04735 496 aa16.28■□□□□ 0.2
Trim39-203ENSMUST00000113706 Cpa4Q6P8K8 420 aa16.28■□□□□ 0.2
Trim39-203ENSMUST00000113706 Ccdc186Q8C9S4 917 aa16.28■□□□□ 0.2
Trim39-203ENSMUST00000113706 PvrQ8K094 408 aa16.28■□□□□ 0.2
Trim39-203ENSMUST00000113706 Pnpt1Q8K1R3 783 aaKnown RBP16.28■□□□□ 0.2
Trim39-203ENSMUST00000113706 Ugt2b1Q8R084 529 aa16.28■□□□□ 0.2
Trim39-203ENSMUST00000113706 Lrrc8cQ8R502 803 aa16.28■□□□□ 0.2
Trim39-203ENSMUST00000113706 HttP42859 3119 aa16.28■□□□□ 0.2
Trim39-203ENSMUST00000113706 Rplp2P99027 115 aaKnown RBP16.28■□□□□ 0.2
Trim39-203ENSMUST00000113706 CenpuQ8C4M7 410 aa16.28■□□□□ 0.2
Trim39-203ENSMUST00000113706 Pak1ip1Q9DCE5 382 aaKnown RBP16.28■□□□□ 0.2
Trim39-203ENSMUST00000113706 Il17rbQ9JIP3 499 aa16.28■□□□□ 0.2
Trim39-203ENSMUST00000113706 Copg2Q9QXK3 871 aa16.28■□□□□ 0.2
Trim39-203ENSMUST00000113706 Bclaf3A2AG58 752 aaKnown RBP16.28■□□□□ 0.2
Trim39-203ENSMUST00000113706 Rhox3fA2ANE1 215 aa16.28■□□□□ 0.2
Trim39-203ENSMUST00000113706 Hsd17b7O88736 334 aa16.28■□□□□ 0.2
Trim39-203ENSMUST00000113706 Arpp19P56212 112 aaKnown RBP16.28■□□□□ 0.2
Trim39-203ENSMUST00000113706 Fbxo39Q5NBU5 443 aa16.28■□□□□ 0.2
Trim39-203ENSMUST00000113706 CcnjlQ5SRT8 387 aa16.28■□□□□ 0.2
Trim39-203ENSMUST00000113706 Tbc1d1Q60949 1255 aa16.28■□□□□ 0.2
Trim39-203ENSMUST00000113706 Ssxb5Q6XAS2 159 aa16.28■□□□□ 0.2
Trim39-203ENSMUST00000113706 MroQ7TNB4 248 aa16.28■□□□□ 0.2
Trim39-203ENSMUST00000113706 Olfr538Q7TRT5 310 aa16.28■□□□□ 0.2
Trim39-203ENSMUST00000113706 Il17reQ8BH06 637 aa16.28■□□□□ 0.2
Trim39-203ENSMUST00000113706 4933402J07RikQ8BHX0 270 aa16.28■□□□□ 0.2
Trim39-203ENSMUST00000113706 Robo4Q8C310 1012 aa16.28■□□□□ 0.2
Trim39-203ENSMUST00000113706 Rfx6Q8C7R7 927 aa16.28■□□□□ 0.2
Trim39-203ENSMUST00000113706 Tasp1Q8R1G1 420 aa16.28■□□□□ 0.2
Trim39-203ENSMUST00000113706 Lars2Q8VDC0 902 aa16.28■□□□□ 0.2
Trim39-203ENSMUST00000113706 Nle1Q8VEJ4 485 aa16.28■□□□□ 0.2
Trim39-203ENSMUST00000113706 QpctQ9CYK2 362 aa16.28■□□□□ 0.2
Trim39-203ENSMUST00000113706 Btnl4A2CG29 586 aa16.27■□□□□ 0.2
Trim39-203ENSMUST00000113706 Spin2fJ3QPU0 254 aa16.27■□□□□ 0.2
Trim39-203ENSMUST00000113706 Trove2O08848 538 aa16.27■□□□□ 0.2
Trim39-203ENSMUST00000113706 Serac1Q3U213 654 aa16.27■□□□□ 0.2
Trim39-203ENSMUST00000113706 Grm5Q3UVX5 1203 aa16.27■□□□□ 0.2
Trim39-203ENSMUST00000113706 SkiQ60698 725 aa16.27■□□□□ 0.2
Trim39-203ENSMUST00000113706 Ksr1Q61097 873 aa16.27■□□□□ 0.2
Trim39-203ENSMUST00000113706 Hbs1lQ69ZS7 682 aa16.27■□□□□ 0.2
Trim39-203ENSMUST00000113706 Mvb12bQ6KAU4 317 aa16.27■□□□□ 0.2
Trim39-203ENSMUST00000113706 GnasQ6R0H7 1133 aa16.27■□□□□ 0.2
Trim39-203ENSMUST00000113706 Trpm4Q7TN37 1213 aa16.27■□□□□ 0.2
Trim39-203ENSMUST00000113706 Znf879Q8BI99 563 aa16.27■□□□□ 0.2
Trim39-203ENSMUST00000113706 Frmd4aQ8BIE6 1020 aa16.27■□□□□ 0.2
Trim39-203ENSMUST00000113706 PisdQ8BSF4 406 aa16.27■□□□□ 0.2
Trim39-203ENSMUST00000113706 Csnk1g3Q8C4X2 424 aa16.27■□□□□ 0.2
Trim39-203ENSMUST00000113706 Glis1Q8K1M4 789 aa16.27■□□□□ 0.2
Trim39-203ENSMUST00000113706 ClmpQ8R373 373 aa16.27■□□□□ 0.2
Trim39-203ENSMUST00000113706 Olfr784Q8VFZ9 319 aa16.27■□□□□ 0.2
Trim39-203ENSMUST00000113706 Prkag2Q91WG5 566 aa16.27■□□□□ 0.2
Trim39-203ENSMUST00000113706 Cybrd1Q925G2 290 aa16.27■□□□□ 0.2
Trim39-203ENSMUST00000113706 DgkeQ9R1C6 564 aa16.27■□□□□ 0.2
Trim39-203ENSMUST00000113706 Lrriq4A6H6A4 596 aa16.27■□□□□ 0.19
Trim39-203ENSMUST00000113706 Arhgef26D3YYY8 869 aa16.27■□□□□ 0.19
Trim39-203ENSMUST00000113706 Vmn2r104E9Q2J5 860 aa16.27■□□□□ 0.19
Trim39-203ENSMUST00000113706 ZfaP23607 742 aa16.27■□□□□ 0.19
Trim39-203ENSMUST00000113706 Pdcd2P46718 343 aa16.27■□□□□ 0.19
Trim39-203ENSMUST00000113706 B020004J07RikQ3UTC0 476 aa16.27■□□□□ 0.19
Trim39-203ENSMUST00000113706 RadilQ69Z89 1099 aa16.27■□□□□ 0.19
Trim39-203ENSMUST00000113706 Olfr1198Q7TR12 308 aa16.27■□□□□ 0.19
Trim39-203ENSMUST00000113706 Mrps22Q9CXW2 359 aa16.27■□□□□ 0.19
Trim39-203ENSMUST00000113706 Kif12Q9D2Z8 642 aa16.27■□□□□ 0.19
Trim39-203ENSMUST00000113706 Spatc1lQ9D9W0 342 aa16.27■□□□□ 0.19
Retrieved 100 of 22,080 RNA–protein pairs in 21 ms