RNA–Protein interactions for RNA: ENSMUST00000108531.7

Nup88-203, Transcript of Nuclear pore complex protein Nup88, mousemouse

TSL 1 (best) BASIC

Gene Nup88, Length 2,453 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88-203ENSMUST00000108531 UtyP79457 1212 aa13.21□□□□□ -0.29
Nup88-203ENSMUST00000108531 Sox8Q04886 464 aa13.21□□□□□ -0.29
Nup88-203ENSMUST00000108531 Fnip2Q80TD3 1108 aa13.21□□□□□ -0.29
Nup88-203ENSMUST00000108531 Lca5lQ8C0X0 741 aa13.21□□□□□ -0.29
Nup88-203ENSMUST00000108531 Vopp1Q8R1C3 172 aa13.21□□□□□ -0.29
Nup88-203ENSMUST00000108531 NeproQ8R2U2 564 aa13.21□□□□□ -0.29
Nup88-203ENSMUST00000108531 Sult5a1Q91X36 291 aa13.21□□□□□ -0.29
Nup88-203ENSMUST00000108531 Prmt7Q922X9 692 aa13.21□□□□□ -0.29
Nup88-203ENSMUST00000108531 Mrps18aQ99N85 196 aa13.21□□□□□ -0.29
Nup88-203ENSMUST00000108531 Serbp1Q9CY58 407 aaKnown RBP13.21□□□□□ -0.29
Nup88-203ENSMUST00000108531 Rmdn1Q9DCV4 305 aa13.21□□□□□ -0.29
Nup88-203ENSMUST00000108531 Cpxm1Q9Z100 722 aa13.21□□□□□ -0.29
Nup88-203ENSMUST00000108531 Ccdc144bE9PVZ3 520 aa13.2□□□□□ -0.3
Nup88-203ENSMUST00000108531 Mcpt1P11034 246 aa13.2□□□□□ -0.3
Nup88-203ENSMUST00000108531 SiaeP70665 541 aa13.2□□□□□ -0.3
Nup88-203ENSMUST00000108531 Asprv1Q09PK2 339 aa13.2□□□□□ -0.3
Nup88-203ENSMUST00000108531 Ak8Q32M07 479 aa13.2□□□□□ -0.3
Nup88-203ENSMUST00000108531 Srbd1Q497V5 1015 aaKnown RBP13.2□□□□□ -0.3
Nup88-203ENSMUST00000108531 Ecm1Q61508 559 aa13.2□□□□□ -0.3
Nup88-203ENSMUST00000108531 Znf148Q61624 794 aa13.2□□□□□ -0.3
Nup88-203ENSMUST00000108531 Il17aQ62386 158 aa13.2□□□□□ -0.3
Nup88-203ENSMUST00000108531 Scube1Q6NZL8 1018 aa13.2□□□□□ -0.3
Nup88-203ENSMUST00000108531 Zbtb41Q811F1 908 aa13.2□□□□□ -0.3
Nup88-203ENSMUST00000108531 Lyve1Q8BHC0 318 aa13.2□□□□□ -0.3
Nup88-203ENSMUST00000108531 Trim32Q8CH72 655 aa13.2□□□□□ -0.3
Nup88-203ENSMUST00000108531 Nup85Q8R480 656 aaKnown RBP13.2□□□□□ -0.3
Nup88-203ENSMUST00000108531 Zdhhc7Q91WU6 308 aa13.2□□□□□ -0.3
Nup88-203ENSMUST00000108531 Pcdhb18Q91Y02 792 aa13.2□□□□□ -0.3
Nup88-203ENSMUST00000108531 Stk33Q924X7 491 aa13.2□□□□□ -0.3
Nup88-203ENSMUST00000108531 Poc5Q9DBS8 558 aa13.2□□□□□ -0.3
Nup88-203ENSMUST00000108531 Gpr45Q9EQQ4 373 aa13.2□□□□□ -0.3
Nup88-203ENSMUST00000108531 Rabgap1lA6H6A9 815 aa13.2□□□□□ -0.3
Nup88-203ENSMUST00000108531 Galntl6E5D8G1 601 aa13.2□□□□□ -0.3
Nup88-203ENSMUST00000108531 Akap10O88845 662 aa13.2□□□□□ -0.3
Nup88-203ENSMUST00000108531 Fdft1P53798 416 aa13.2□□□□□ -0.3
Nup88-203ENSMUST00000108531 NrlP54846 237 aa13.2□□□□□ -0.3
Nup88-203ENSMUST00000108531 CtswP56203 371 aa13.2□□□□□ -0.3
Nup88-203ENSMUST00000108531 Rpl26P61255 145 aaKnown RBP13.2□□□□□ -0.3
Nup88-203ENSMUST00000108531 Vps45P97390 570 aa13.2□□□□□ -0.3
Nup88-203ENSMUST00000108531 Fam189a2Q4FZH1 290 aa13.2□□□□□ -0.3
Nup88-203ENSMUST00000108531 Zfp658Q5PPQ4 887 aa13.2□□□□□ -0.3
Nup88-203ENSMUST00000108531 Foxd4Q60688 444 aa13.2□□□□□ -0.3
Nup88-203ENSMUST00000108531 Itih1Q61702 907 aa13.2□□□□□ -0.3
Nup88-203ENSMUST00000108531 Ahcyl2Q68FL4 613 aaKnown RBP13.2□□□□□ -0.3
Nup88-203ENSMUST00000108531 Fndc3bQ6NWW9 1207 aaKnown RBP13.2□□□□□ -0.3
Nup88-203ENSMUST00000108531 Rasa4Q6PFQ7 802 aa13.2□□□□□ -0.3
Nup88-203ENSMUST00000108531 Ankrd45Q810N6 248 aa13.2□□□□□ -0.3
Nup88-203ENSMUST00000108531 Kcns3Q8BQZ8 491 aa13.2□□□□□ -0.3
Nup88-203ENSMUST00000108531 Znf385bQ8BXJ8 482 aaKnown RBP13.2□□□□□ -0.3
Nup88-203ENSMUST00000108531 Ston2Q8BZ60 895 aa13.2□□□□□ -0.3
Nup88-203ENSMUST00000108531 Wdr59Q8C0M0 992 aa13.2□□□□□ -0.3
Nup88-203ENSMUST00000108531 Plbd1Q8VCI0 550 aa13.2□□□□□ -0.3
Nup88-203ENSMUST00000108531 Pcdhb10Q91VE5 797 aa13.2□□□□□ -0.3
Nup88-203ENSMUST00000108531 SmtnQ921U8 923 aa13.2□□□□□ -0.3
Nup88-203ENSMUST00000108531 Micu3Q9CTY5 523 aa13.2□□□□□ -0.3
Nup88-203ENSMUST00000108531 Hacd2Q9D3B1 254 aa13.2□□□□□ -0.3
Nup88-203ENSMUST00000108531 Hey2Q9QUS4 339 aa13.2□□□□□ -0.3
Nup88-203ENSMUST00000108531 Map3k6Q9WTR2 1291 aa13.2□□□□□ -0.3
Nup88-203ENSMUST00000108531 Shcbp1Q9Z179 668 aa13.2□□□□□ -0.3
Nup88-203ENSMUST00000108531 Dpysl2O08553 572 aaKnown RBP13.19□□□□□ -0.3
Nup88-203ENSMUST00000108531 Cyp2j6O54750 501 aa13.19□□□□□ -0.3
Nup88-203ENSMUST00000108531 InvsO89019 1062 aa13.19□□□□□ -0.3
Nup88-203ENSMUST00000108531 H2-Eb1P04230 264 aa13.19□□□□□ -0.3
Nup88-203ENSMUST00000108531 Cd3gP11942 182 aa13.19□□□□□ -0.3
Nup88-203ENSMUST00000108531 Cyp2b10P12791 500 aa13.19□□□□□ -0.3
Nup88-203ENSMUST00000108531 Scd1P13516 355 aa13.19□□□□□ -0.3
Nup88-203ENSMUST00000108531 Lmo2P25801 158 aa13.19□□□□□ -0.3
Nup88-203ENSMUST00000108531 Krt6aP50446 553 aa13.19□□□□□ -0.3
Nup88-203ENSMUST00000108531 Tubgcp3P58854 905 aa13.19□□□□□ -0.3
Nup88-203ENSMUST00000108531 Gabpb1Q00420 383 aa13.19□□□□□ -0.3
Nup88-203ENSMUST00000108531 Itga4Q00651 1039 aa13.19□□□□□ -0.3
Nup88-203ENSMUST00000108531 Q14AM7 275 aa13.19□□□□□ -0.3
Nup88-203ENSMUST00000108531 Mpzl3Q3V3F6 237 aa13.19□□□□□ -0.3
Nup88-203ENSMUST00000108531 Clhc1Q5M6W3 596 aa13.19□□□□□ -0.3
Nup88-203ENSMUST00000108531 Fbxw2Q60584 422 aa13.19□□□□□ -0.3
Nup88-203ENSMUST00000108531 ScinQ60604 715 aa13.19□□□□□ -0.3
Nup88-203ENSMUST00000108531 Kcna4Q61423 654 aa13.19□□□□□ -0.3
Nup88-203ENSMUST00000108531 Cyp3a13Q64464 503 aa13.19□□□□□ -0.3
Nup88-203ENSMUST00000108531 DgkqQ6P5E8 934 aa13.19□□□□□ -0.3
Nup88-203ENSMUST00000108531 Stk40Q7TNL3 435 aa13.19□□□□□ -0.3
Nup88-203ENSMUST00000108531 Il17reQ8BH06 637 aa13.19□□□□□ -0.3
Nup88-203ENSMUST00000108531 Fra10ac1Q8BP78 315 aa13.19□□□□□ -0.3
Nup88-203ENSMUST00000108531 Fbxw7Q8VBV4 629 aa13.19□□□□□ -0.3
Nup88-203ENSMUST00000108531 Zcchc18Q8VD24 393 aa13.19□□□□□ -0.3
Nup88-203ENSMUST00000108531 Agap3Q8VHH5 910 aa13.19□□□□□ -0.3
Nup88-203ENSMUST00000108531 Vangl2Q91ZD4 521 aa13.19□□□□□ -0.3
Nup88-203ENSMUST00000108531 Tex19.1Q99MV2 351 aa13.19□□□□□ -0.3
Nup88-203ENSMUST00000108531 Fam136aQ9CR98 138 aa13.19□□□□□ -0.3
Nup88-203ENSMUST00000108531 Fip1l1Q9D824 581 aaKnown RBP13.19□□□□□ -0.3
Nup88-203ENSMUST00000108531 Dcaf6Q9DC22 876 aa13.19□□□□□ -0.3
Nup88-203ENSMUST00000108531 Ing2Q9ESK4 281 aa13.19□□□□□ -0.3
Nup88-203ENSMUST00000108531 Mapk13Q9Z1B7 366 aa13.19□□□□□ -0.3
Nup88-203ENSMUST00000108531 Adgra2Q91ZV8 1336 aa13.19□□□□□ -0.3
Nup88-203ENSMUST00000108531 Gm10720D3Z1I5 223 aa13.19□□□□□ -0.3
Nup88-203ENSMUST00000108531 Mup13L7N222 235 aa13.19□□□□□ -0.3
Nup88-203ENSMUST00000108531 Foxm1O08696 760 aa13.19□□□□□ -0.3
Nup88-203ENSMUST00000108531 Grpel2O88396 224 aa13.19□□□□□ -0.3
Nup88-203ENSMUST00000108531 Hcn3O88705 779 aa13.19□□□□□ -0.3
Nup88-203ENSMUST00000108531 Ap2a1P17426 977 aaKnown RBP13.19□□□□□ -0.3
Nup88-203ENSMUST00000108531 PenkP22005 268 aa13.19□□□□□ -0.3
Retrieved 100 of 22,080 RNA–protein pairs in 27.4 ms