RNA–Protein interactions for RNA: ENSMUST00000053440.7

Ccdc40-202, Transcript of Coiled-coil domain-containing protein 40, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Ccdc40, Length 3,524 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40-202ENSMUST00000053440 Tmem260Q8BMD6 703 aa10.02□□□□□ -0.81
Ccdc40-202ENSMUST00000053440 Prr33Q8C494 260 aa10.02□□□□□ -0.81
Ccdc40-202ENSMUST00000053440 CherpQ8CGZ0 936 aaKnown RBP10.02□□□□□ -0.81
Ccdc40-202ENSMUST00000053440 Fnbp1lQ8K012 605 aa10.02□□□□□ -0.81
Ccdc40-202ENSMUST00000053440 Sorcs3Q8VI51 1219 aa10.02□□□□□ -0.81
Ccdc40-202ENSMUST00000053440 Dok4Q99KE3 325 aa10.02□□□□□ -0.81
Ccdc40-202ENSMUST00000053440 Ogfod2Q9CQ04 349 aa10.02□□□□□ -0.81
Ccdc40-202ENSMUST00000053440 ProzQ9CQW3 399 aa10.02□□□□□ -0.81
Ccdc40-202ENSMUST00000053440 Tle2Q9WVB2 767 aa10.02□□□□□ -0.81
Ccdc40-202ENSMUST00000053440 NrapQ80XB4 1728 aa10.01□□□□□ -0.81
Ccdc40-202ENSMUST00000053440 Zmynd8A2A484 1235 aaKnown RBP10.01□□□□□ -0.81
Ccdc40-202ENSMUST00000053440 Bclaf3A2AG58 752 aaKnown RBP10.01□□□□□ -0.81
Ccdc40-202ENSMUST00000053440 Gm10720D3Z1I5 223 aa10.01□□□□□ -0.81
Ccdc40-202ENSMUST00000053440 C87414E9PWI7 475 aa10.01□□□□□ -0.81
Ccdc40-202ENSMUST00000053440 Olfr1354E9Q5G9 310 aa10.01□□□□□ -0.81
Ccdc40-202ENSMUST00000053440 AvilO88398 819 aa10.01□□□□□ -0.81
Ccdc40-202ENSMUST00000053440 Klc2O88448 599 aa10.01□□□□□ -0.81
Ccdc40-202ENSMUST00000053440 Rb1P13405 921 aa10.01□□□□□ -0.81
Ccdc40-202ENSMUST00000053440 Hsd11b2P51661 386 aa10.01□□□□□ -0.81
Ccdc40-202ENSMUST00000053440 Fbp2P70695 339 aa10.01□□□□□ -0.81
Ccdc40-202ENSMUST00000053440 Hsdl2Q2TPA8 490 aaKnown RBP10.01□□□□□ -0.81
Ccdc40-202ENSMUST00000053440 E330034G19RikQ3UWX6 351 aa10.01□□□□□ -0.81
Ccdc40-202ENSMUST00000053440 Zfp956Q3UZY6 572 aa10.01□□□□□ -0.81
Ccdc40-202ENSMUST00000053440 Arl13bQ640N2 427 aa10.01□□□□□ -0.81
Ccdc40-202ENSMUST00000053440 Klhl14Q69ZK5 630 aa10.01□□□□□ -0.81
Ccdc40-202ENSMUST00000053440 Olfr389Q7TRX7 312 aa10.01□□□□□ -0.81
Ccdc40-202ENSMUST00000053440 Rnf168Q80XJ2 565 aa10.01□□□□□ -0.81
Ccdc40-202ENSMUST00000053440 Hspbap1Q8BK58 483 aa10.01□□□□□ -0.81
Ccdc40-202ENSMUST00000053440 Cep57Q8CEE0 500 aa10.01□□□□□ -0.81
Ccdc40-202ENSMUST00000053440 Pcdhb10Q91VE5 797 aa10.01□□□□□ -0.81
Ccdc40-202ENSMUST00000053440 Fam192aQ91WE2 254 aa10.01□□□□□ -0.81
Ccdc40-202ENSMUST00000053440 Adcy4Q91WF3 1077 aa10.01□□□□□ -0.81
Ccdc40-202ENSMUST00000053440 Catsper1Q91ZR5 686 aa10.01□□□□□ -0.81
Ccdc40-202ENSMUST00000053440 Def8Q99J78 448 aa10.01□□□□□ -0.81
Ccdc40-202ENSMUST00000053440 Ndc80Q9D0F1 642 aaKnown RBP10.01□□□□□ -0.81
Ccdc40-202ENSMUST00000053440 Maged2Q9ER67 616 aa10.01□□□□□ -0.81
Ccdc40-202ENSMUST00000053440 Pi16Q9ET66 489 aa10.01□□□□□ -0.81
Ccdc40-202ENSMUST00000053440 Rasgrp2Q9QUG9 608 aa10.01□□□□□ -0.81
Ccdc40-202ENSMUST00000053440 Usp21Q9QZL6 566 aa10.01□□□□□ -0.81
Ccdc40-202ENSMUST00000053440 Shcbp1Q9Z179 668 aa10.01□□□□□ -0.81
Ccdc40-202ENSMUST00000053440 Polr2aP08775 1970 aaKnown RBP10.01□□□□□ -0.81
Ccdc40-202ENSMUST00000053440 Ccdc144bE9PVZ3 520 aa10.01□□□□□ -0.81
Ccdc40-202ENSMUST00000053440 Zfp850J3QPC5 689 aa10.01□□□□□ -0.81
Ccdc40-202ENSMUST00000053440 Ptpn9O35239 593 aa10.01□□□□□ -0.81
Ccdc40-202ENSMUST00000053440 Arhgap10Q6Y5D8 786 aa10.01□□□□□ -0.81
Ccdc40-202ENSMUST00000053440 Slc39a14Q75N73 489 aa10.01□□□□□ -0.81
Ccdc40-202ENSMUST00000053440 Akap7Q7TN79 314 aa10.01□□□□□ -0.81
Ccdc40-202ENSMUST00000053440 Mis18bp1Q80WQ8 998 aa10.01□□□□□ -0.81
Ccdc40-202ENSMUST00000053440 Fbxw21Q8BI38 468 aa10.01□□□□□ -0.81
Ccdc40-202ENSMUST00000053440 Iars2Q8BIJ6 1012 aa10.01□□□□□ -0.81
Ccdc40-202ENSMUST00000053440 Atg14Q8CDJ3 492 aa10.01□□□□□ -0.81
Ccdc40-202ENSMUST00000053440 Evi2bQ8VD58 444 aa10.01□□□□□ -0.81
Ccdc40-202ENSMUST00000053440 Pdia5Q921X9 517 aa10.01□□□□□ -0.81
Ccdc40-202ENSMUST00000053440 PdgfdQ925I7 370 aa10.01□□□□□ -0.81
Ccdc40-202ENSMUST00000053440 Pkp2Q9CQ73 795 aaKnown RBP10.01□□□□□ -0.81
Ccdc40-202ENSMUST00000053440 Prorsd1Q9D820 169 aa10.01□□□□□ -0.81
Ccdc40-202ENSMUST00000053440 Poc5Q9DBS8 558 aa10.01□□□□□ -0.81
Ccdc40-202ENSMUST00000053440 Nrip2Q9JHR9 270 aa10.01□□□□□ -0.81
Ccdc40-202ENSMUST00000053440 Il21rQ9JHX3 529 aa10.01□□□□□ -0.81
Ccdc40-202ENSMUST00000053440 Tdp2Q9JJX7 370 aa10.01□□□□□ -0.81
Ccdc40-202ENSMUST00000053440 Olfr1160A2AVT0 319 aa10□□□□□ -0.81
Ccdc40-202ENSMUST00000053440 Gm3173A6NAS3 172 aa10□□□□□ -0.81
Ccdc40-202ENSMUST00000053440 UprtB1AVZ0 310 aa10□□□□□ -0.81
Ccdc40-202ENSMUST00000053440 Gm3020E9Q3J7 150 aa10□□□□□ -0.81
Ccdc40-202ENSMUST00000053440 SmgcF6VRN1 385 aa10□□□□□ -0.81
Ccdc40-202ENSMUST00000053440 Gm2897K7N6T7 172 aa10□□□□□ -0.81
Ccdc40-202ENSMUST00000053440 Cd3gP11942 182 aa10□□□□□ -0.81
Ccdc40-202ENSMUST00000053440 Fdft1P53798 416 aa10□□□□□ -0.81
Ccdc40-202ENSMUST00000053440 Cd36Q08857 472 aa10□□□□□ -0.81
Ccdc40-202ENSMUST00000053440 Oas1fQ14AZ4 364 aa10□□□□□ -0.81
Ccdc40-202ENSMUST00000053440 Ak8Q32M07 479 aa10□□□□□ -0.81
Ccdc40-202ENSMUST00000053440 Olfm4Q3UZZ4 505 aa10□□□□□ -0.81
Ccdc40-202ENSMUST00000053440 PhgdhQ61753 533 aaKnown RBP10□□□□□ -0.81
Ccdc40-202ENSMUST00000053440 Itga3Q62470 1053 aa10□□□□□ -0.81
Ccdc40-202ENSMUST00000053440 Znf821Q6PD05 413 aa10□□□□□ -0.81
Ccdc40-202ENSMUST00000053440 Slc16a9Q7TM99 508 aa10□□□□□ -0.81
Ccdc40-202ENSMUST00000053440 DcstampQ7TNJ0 470 aa10□□□□□ -0.81
Ccdc40-202ENSMUST00000053440 Ccdc151Q8BSN3 593 aa10□□□□□ -0.81
Ccdc40-202ENSMUST00000053440 SgczQ8BX51 311 aa10□□□□□ -0.81
Ccdc40-202ENSMUST00000053440 Gm3411Q8C7R2 150 aa10□□□□□ -0.81
Ccdc40-202ENSMUST00000053440 Nudt13Q8JZU0 352 aa10□□□□□ -0.81
Ccdc40-202ENSMUST00000053440 Usp3Q91W36 520 aaKnown RBP10□□□□□ -0.81
Ccdc40-202ENSMUST00000053440 Twf1Q91YR1 350 aaKnown RBP10□□□□□ -0.81
Ccdc40-202ENSMUST00000053440 Vangl2Q91ZD4 521 aa10□□□□□ -0.81
Ccdc40-202ENSMUST00000053440 Ggt7Q99JP7 662 aa10□□□□□ -0.81
Ccdc40-202ENSMUST00000053440 GarsQ9CZD3 729 aaKnown RBP10□□□□□ -0.81
Ccdc40-202ENSMUST00000053440 Acbd6Q9D061 282 aa10□□□□□ -0.81
Ccdc40-202ENSMUST00000053440 Fndc8Q9D2H8 321 aa10□□□□□ -0.81
Ccdc40-202ENSMUST00000053440 Fip1l1Q9D824 581 aaKnown RBP10□□□□□ -0.81
Ccdc40-202ENSMUST00000053440 Psmd12Q9D8W5 456 aa10□□□□□ -0.81
Ccdc40-202ENSMUST00000053440 Borcs5Q9D920 195 aa10□□□□□ -0.81
Ccdc40-202ENSMUST00000053440 Gpr45Q9EQQ4 373 aa10□□□□□ -0.81
Ccdc40-202ENSMUST00000053440 Cacng4Q9JJV4 327 aa10□□□□□ -0.81
Ccdc40-202ENSMUST00000053440 Stk32bQ9JJX8 414 aa10□□□□□ -0.81
Ccdc40-202ENSMUST00000053440 Tagln3Q9R1Q8 199 aa10□□□□□ -0.81
Ccdc40-202ENSMUST00000053440 Olfr652B9EHE6 318 aa10□□□□□ -0.81
Ccdc40-202ENSMUST00000053440 Olfr220E9Q050 325 aa10□□□□□ -0.81
Ccdc40-202ENSMUST00000053440 MttpO08601 894 aa10□□□□□ -0.81
Ccdc40-202ENSMUST00000053440 IkbkgO88522 412 aa10□□□□□ -0.81
Ccdc40-202ENSMUST00000053440 LtfP08071 707 aa10□□□□□ -0.81
Retrieved 100 of 22,080 RNA–protein pairs in 24 ms