RNA–Protein interactions for RNA: ENSMUST00000053317.11

Bdnf-201, Transcript of Brain-derived neurotrophic factor, mousemouse

TSL 1 (best) BASIC

Gene Bdnf, Length 4,266 nt, Biotype protein coding, Subcellular localisation Dendrite .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Bdnf-201ENSMUST00000053317 Gpr179E9PY61 2293 aa7.08□□□□□ -1.28
Bdnf-201ENSMUST00000053317 Gm16430A6X8J1 155 aa7.08□□□□□ -1.28
Bdnf-201ENSMUST00000053317 Ces1bD3Z5G7 567 aa7.08□□□□□ -1.28
Bdnf-201ENSMUST00000053317 Marcksl1P28667 200 aa7.08□□□□□ -1.28
Bdnf-201ENSMUST00000053317 Nudt1P53368 156 aa7.08□□□□□ -1.28
Bdnf-201ENSMUST00000053317 PhexP70669 749 aa7.08□□□□□ -1.28
Bdnf-201ENSMUST00000053317 Sec1P97353 368 aa7.08□□□□□ -1.28
Bdnf-201ENSMUST00000053317 Agxt2Q3UEG6 513 aa7.08□□□□□ -1.28
Bdnf-201ENSMUST00000053317 Agap2Q3UHD9 1186 aa7.08□□□□□ -1.28
Bdnf-201ENSMUST00000053317 Ccdc92bQ5SUE3 299 aa7.08□□□□□ -1.28
Bdnf-201ENSMUST00000053317 Papss1Q60967 624 aa7.08□□□□□ -1.28
Bdnf-201ENSMUST00000053317 Pick1Q62083 416 aa7.08□□□□□ -1.28
Bdnf-201ENSMUST00000053317 Runx3Q64131 409 aa7.08□□□□□ -1.28
Bdnf-201ENSMUST00000053317 N4bp1Q6A037 893 aa7.08□□□□□ -1.28
Bdnf-201ENSMUST00000053317 SyncripQ7TMK9 623 aaKnown RBP7.08□□□□□ -1.28
Bdnf-201ENSMUST00000053317 Abcg2Q7TMS5 657 aa7.08□□□□□ -1.28
Bdnf-201ENSMUST00000053317 Olfr20Q7TRX9 314 aa7.08□□□□□ -1.28
Bdnf-201ENSMUST00000053317 Slc43a1Q8BSM7 564 aa7.08□□□□□ -1.28
Bdnf-201ENSMUST00000053317 Tbl3Q8C4J7 801 aaKnown RBP7.08□□□□□ -1.28
Bdnf-201ENSMUST00000053317 Wdr60Q8C761 999 aa7.08□□□□□ -1.28
Bdnf-201ENSMUST00000053317 Apol9bQ8C7I4 310 aa7.08□□□□□ -1.28
Bdnf-201ENSMUST00000053317 Ddx18Q8K363 660 aaKnown RBP7.08□□□□□ -1.28
Bdnf-201ENSMUST00000053317 CrebzfQ91ZR3 358 aa7.08□□□□□ -1.28
Bdnf-201ENSMUST00000053317 Slc39a3Q99K24 317 aa7.08□□□□□ -1.28
Bdnf-201ENSMUST00000053317 Uts2Q9QZQ3 123 aa7.08□□□□□ -1.28
Bdnf-201ENSMUST00000053317 Zranb2Q9R020 330 aaKnown RBP7.08□□□□□ -1.28
Bdnf-201ENSMUST00000053317 Rtl9Q32KG4 1339 aa7.08□□□□□ -1.28
Bdnf-201ENSMUST00000053317 Zscan5bB2RTN3 468 aa7.08□□□□□ -1.28
Bdnf-201ENSMUST00000053317 Pias3O54714 628 aa7.08□□□□□ -1.28
Bdnf-201ENSMUST00000053317 Entpd2O55026 495 aa7.08□□□□□ -1.28
Bdnf-201ENSMUST00000053317 Hmga1P17095 107 aaKnown RBP7.08□□□□□ -1.28
Bdnf-201ENSMUST00000053317 PltpP55065 493 aa7.08□□□□□ -1.28
Bdnf-201ENSMUST00000053317 Itga11P61622 1188 aa7.08□□□□□ -1.28
Bdnf-201ENSMUST00000053317 Trim43cP86449 446 aa7.08□□□□□ -1.28
Bdnf-201ENSMUST00000053317 Tcp11Q01755 566 aa7.08□□□□□ -1.28
Bdnf-201ENSMUST00000053317 Gjb5Q02739 271 aa7.08□□□□□ -1.28
Bdnf-201ENSMUST00000053317 Serpinb6Q60854 378 aa7.08□□□□□ -1.28
Bdnf-201ENSMUST00000053317 Atg16l2Q6KAU8 623 aa7.08□□□□□ -1.28
Bdnf-201ENSMUST00000053317 Cypt4Q6P925 153 aa7.08□□□□□ -1.28
Bdnf-201ENSMUST00000053317 HltfQ6PCN7 1003 aa7.08□□□□□ -1.28
Bdnf-201ENSMUST00000053317 Olfr1198Q7TR12 308 aa7.08□□□□□ -1.28
Bdnf-201ENSMUST00000053317 Ticam2Q8BJQ4 232 aa7.08□□□□□ -1.28
Bdnf-201ENSMUST00000053317 Znf76Q8BMU0 568 aa7.08□□□□□ -1.28
Bdnf-201ENSMUST00000053317 E330017A01RikQ8BU47 192 aa7.08□□□□□ -1.28
Bdnf-201ENSMUST00000053317 Rtn4rl1Q8K0S5 445 aa7.08□□□□□ -1.28
Bdnf-201ENSMUST00000053317 Prpsap2Q8R574 369 aa7.08□□□□□ -1.28
Bdnf-201ENSMUST00000053317 PigxQ99LV7 254 aa7.08□□□□□ -1.28
Bdnf-201ENSMUST00000053317 MkksQ9JI70 570 aa7.08□□□□□ -1.28
Bdnf-201ENSMUST00000053317 Fzd2Q9JIP6 570 aa7.08□□□□□ -1.28
Bdnf-201ENSMUST00000053317 Slc26a3Q9WVC8 757 aa7.08□□□□□ -1.28
Bdnf-201ENSMUST00000053317 Myo15bI7HPW8 3033 aa7.08□□□□□ -1.28
Bdnf-201ENSMUST00000053317 Auts2A0A087WPF7 1261 aa7.08□□□□□ -1.28
Bdnf-201ENSMUST00000053317 Dpysl4O35098 572 aa7.08□□□□□ -1.28
Bdnf-201ENSMUST00000053317 Tcp1P11983 556 aaKnown RBP7.08□□□□□ -1.28
Bdnf-201ENSMUST00000053317 Atp8a1P70704 1164 aa7.08□□□□□ -1.28
Bdnf-201ENSMUST00000053317 Q3UE31 404 aa7.08□□□□□ -1.28
Bdnf-201ENSMUST00000053317 Krt35Q497I4 455 aa7.08□□□□□ -1.28
Bdnf-201ENSMUST00000053317 GstcdQ5RL51 634 aa7.08□□□□□ -1.28
Bdnf-201ENSMUST00000053317 Znf235Q61116 645 aa7.08□□□□□ -1.28
Bdnf-201ENSMUST00000053317 Igfbp7Q61581 281 aa7.08□□□□□ -1.28
Bdnf-201ENSMUST00000053317 EfsQ64355 560 aa7.08□□□□□ -1.28
Bdnf-201ENSMUST00000053317 Rftn1Q6A0D4 554 aa7.08□□□□□ -1.28
Bdnf-201ENSMUST00000053317 C1qtnf6Q6IR41 264 aa7.08□□□□□ -1.28
Bdnf-201ENSMUST00000053317 Ephb1Q8CBF3 984 aa7.08□□□□□ -1.28
Bdnf-201ENSMUST00000053317 Prpf39Q8K2Z2 665 aa7.08□□□□□ -1.28
Bdnf-201ENSMUST00000053317 Agap3Q8VHH5 910 aa7.08□□□□□ -1.28
Bdnf-201ENSMUST00000053317 Dhx58Q99J87 678 aa7.08□□□□□ -1.28
Bdnf-201ENSMUST00000053317 Cyp4f13Q99N19 523 aa7.08□□□□□ -1.28
Bdnf-201ENSMUST00000053317 Mpp6Q9JLB0 553 aa7.08□□□□□ -1.28
Bdnf-201ENSMUST00000053317 Trp53inp1Q9QXE4 239 aa7.08□□□□□ -1.28
Bdnf-201ENSMUST00000053317 Gm12695A2AGB2 545 aa7.07□□□□□ -1.28
Bdnf-201ENSMUST00000053317 Gpr161B2RPY5 545 aa7.07□□□□□ -1.28
Bdnf-201ENSMUST00000053317 Gm10718D3Z1I7 227 aa7.07□□□□□ -1.28
Bdnf-201ENSMUST00000053317 Dthd1E9PZX1 795 aa7.07□□□□□ -1.28
Bdnf-201ENSMUST00000053317 Atxn1lP0C7T6 687 aa7.07□□□□□ -1.28
Bdnf-201ENSMUST00000053317 Slc7a2P18581 657 aa7.07□□□□□ -1.28
Bdnf-201ENSMUST00000053317 Fen1P39749 378 aa7.07□□□□□ -1.28
Bdnf-201ENSMUST00000053317 Mybl1P51960 751 aa7.07□□□□□ -1.28
Bdnf-201ENSMUST00000053317 Vsnl1P62761 191 aa7.07□□□□□ -1.28
Bdnf-201ENSMUST00000053317 Ccdc138Q0VF22 680 aa7.07□□□□□ -1.28
Bdnf-201ENSMUST00000053317 Atp8b1Q148W0 1251 aa7.07□□□□□ -1.28
Bdnf-201ENSMUST00000053317 RhocQ62159 193 aa7.07□□□□□ -1.28
Bdnf-201ENSMUST00000053317 Casc4Q6P2L7 435 aa7.07□□□□□ -1.28
Bdnf-201ENSMUST00000053317 Mgat5bQ765H6 792 aa7.07□□□□□ -1.28
Bdnf-201ENSMUST00000053317 Trim62Q80V85 475 aa7.07□□□□□ -1.28
Bdnf-201ENSMUST00000053317 Trnau1apQ80VC6 287 aaKnown RBP7.07□□□□□ -1.28
Bdnf-201ENSMUST00000053317 Kxd1Q80XH1 177 aa7.07□□□□□ -1.28
Bdnf-201ENSMUST00000053317 B3galnt2Q8BG28 504 aa7.07□□□□□ -1.28
Bdnf-201ENSMUST00000053317 Cnot10Q8BH15 744 aa7.07□□□□□ -1.28
Bdnf-201ENSMUST00000053317 Clasp2Q8BRT1 1286 aaKnown RBP7.07□□□□□ -1.28
Bdnf-201ENSMUST00000053317 Rspry1Q8BVR6 576 aa7.07□□□□□ -1.28
Bdnf-201ENSMUST00000053317 Nlrp4bQ8C6J9 863 aa7.07□□□□□ -1.28
Bdnf-201ENSMUST00000053317 Oas1dQ8VI95 361 aa7.07□□□□□ -1.28
Bdnf-201ENSMUST00000053317 DeraQ91YP3 318 aa7.07□□□□□ -1.28
Bdnf-201ENSMUST00000053317 Atpaf2Q91YY4 289 aa7.07□□□□□ -1.28
Bdnf-201ENSMUST00000053317 Tomm70Q9CZW5 611 aa7.07□□□□□ -1.28
Bdnf-201ENSMUST00000053317 Klra17Q9JMA4 273 aa7.07□□□□□ -1.28
Bdnf-201ENSMUST00000053317 Mapk13Q9Z1B7 366 aa7.07□□□□□ -1.28
Bdnf-201ENSMUST00000053317 Obsl1D3YYU8 1804 aaKnown RBP7.07□□□□□ -1.28
Bdnf-201ENSMUST00000053317 Zfp811A0A0J9YU71 552 aa7.07□□□□□ -1.28
Retrieved 100 of 22,080 RNA–protein pairs in 20.3 ms