RNA–Protein interactions for RNA: ENSMUST00000052648.8

Ccdc28a-201, Transcript of Coiled-coil domain-containing 28A, mousemouse

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Gene Ccdc28a, Length 2,255 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28a-201ENSMUST00000052648 Zfp566Q8VCI1 386 aa9.12□□□□□ -0.95
Ccdc28a-201ENSMUST00000052648 Asz1Q8VD46 475 aa9.12□□□□□ -0.95
Ccdc28a-201ENSMUST00000052648 Caap1Q8VDY9 356 aa9.12□□□□□ -0.95
Ccdc28a-201ENSMUST00000052648 Olfr847Q8VFF4 312 aa9.12□□□□□ -0.95
Ccdc28a-201ENSMUST00000052648 Olfr478Q8VG04 314 aa9.12□□□□□ -0.95
Ccdc28a-201ENSMUST00000052648 Smim14Q91VT8 99 aa9.12□□□□□ -0.95
Ccdc28a-201ENSMUST00000052648 Atpaf2Q91YY4 289 aa9.12□□□□□ -0.95
Ccdc28a-201ENSMUST00000052648 Tfap2dQ91ZK0 452 aa9.12□□□□□ -0.95
Ccdc28a-201ENSMUST00000052648 Q9D937 123 aaKnown RBP9.12□□□□□ -0.95
Ccdc28a-201ENSMUST00000052648 Prpf4Q9DAW6 521 aaKnown RBP9.12□□□□□ -0.95
Ccdc28a-201ENSMUST00000052648 PdclQ9DBX2 301 aa9.12□□□□□ -0.95
Ccdc28a-201ENSMUST00000052648 Olfr703Q9EPF5 319 aa9.12□□□□□ -0.95
Ccdc28a-201ENSMUST00000052648 D7h11orf16Q9JJR6 402 aa9.12□□□□□ -0.95
Ccdc28a-201ENSMUST00000052648 Mybpc3O70468 1270 aaKnown RBP9.11□□□□□ -0.95
Ccdc28a-201ENSMUST00000052648 AfpP02772 605 aa9.11□□□□□ -0.95
Ccdc28a-201ENSMUST00000052648 Cdo1P60334 200 aa9.11□□□□□ -0.95
Ccdc28a-201ENSMUST00000052648 ItpripQ3TNL8 555 aa9.11□□□□□ -0.95
Ccdc28a-201ENSMUST00000052648 Prickle1Q3U5C7 832 aa9.11□□□□□ -0.95
Ccdc28a-201ENSMUST00000052648 Rnf10Q3UIW5 804 aa9.11□□□□□ -0.95
Ccdc28a-201ENSMUST00000052648 Lipo3Q3UT41 399 aa9.11□□□□□ -0.95
Ccdc28a-201ENSMUST00000052648 Cxcl17Q5UW37 119 aa9.11□□□□□ -0.95
Ccdc28a-201ENSMUST00000052648 Fbxw2Q60584 422 aa9.11□□□□□ -0.95
Ccdc28a-201ENSMUST00000052648 HiraQ61666 1015 aa9.11□□□□□ -0.95
Ccdc28a-201ENSMUST00000052648 Aldh1a2Q62148 518 aa9.11□□□□□ -0.95
Ccdc28a-201ENSMUST00000052648 Tspyl5Q69ZB3 406 aa9.11□□□□□ -0.95
Ccdc28a-201ENSMUST00000052648 Rimbp2Q80U40 1072 aa9.11□□□□□ -0.95
Ccdc28a-201ENSMUST00000052648 Adam29Q811Q4 763 aa9.11□□□□□ -0.95
Ccdc28a-201ENSMUST00000052648 Q8BHN7 327 aa9.11□□□□□ -0.95
Ccdc28a-201ENSMUST00000052648 Klhl7Q8BUL5 586 aa9.11□□□□□ -0.95
Ccdc28a-201ENSMUST00000052648 Arhgap12Q8C0D4 838 aa9.11□□□□□ -0.95
Ccdc28a-201ENSMUST00000052648 Tldc1Q8K0P3 455 aa9.11□□□□□ -0.95
Ccdc28a-201ENSMUST00000052648 Ppp6r2Q8R3Q2 923 aa9.11□□□□□ -0.95
Ccdc28a-201ENSMUST00000052648 Pcdhb11Q91UZ8 797 aa9.11□□□□□ -0.95
Ccdc28a-201ENSMUST00000052648 Rnf135Q9CWS1 417 aa9.11□□□□□ -0.95
Ccdc28a-201ENSMUST00000052648 Plod1Q9R0E2 728 aa9.11□□□□□ -0.95
Ccdc28a-201ENSMUST00000052648 Zfp985A2A7A5 519 aa9.11□□□□□ -0.95
Ccdc28a-201ENSMUST00000052648 Gm13089A2AGW7 455 aa9.11□□□□□ -0.95
Ccdc28a-201ENSMUST00000052648 Tubb1A2AQ07 451 aa9.11□□□□□ -0.95
Ccdc28a-201ENSMUST00000052648 Serpine3E9Q6A2 401 aa9.11□□□□□ -0.95
Ccdc28a-201ENSMUST00000052648 Prkag1O54950 330 aa9.11□□□□□ -0.95
Ccdc28a-201ENSMUST00000052648 Zfp42P22227 288 aa9.11□□□□□ -0.95
Ccdc28a-201ENSMUST00000052648 Htr2cP34968 459 aa9.11□□□□□ -0.95
Ccdc28a-201ENSMUST00000052648 GsrP47791 500 aa9.11□□□□□ -0.95
Ccdc28a-201ENSMUST00000052648 Eif3eP60229 445 aaKnown RBP9.11□□□□□ -0.95
Ccdc28a-201ENSMUST00000052648 Vps45P97390 570 aa9.11□□□□□ -0.95
Ccdc28a-201ENSMUST00000052648 Cdr2P97817 455 aa9.11□□□□□ -0.95
Ccdc28a-201ENSMUST00000052648 Pdcd1Q02242 288 aa9.11□□□□□ -0.95
Ccdc28a-201ENSMUST00000052648 IdsQ08890 552 aa9.11□□□□□ -0.95
Ccdc28a-201ENSMUST00000052648 GsapQ3TCV3 858 aa9.11□□□□□ -0.95
Ccdc28a-201ENSMUST00000052648 Gdpd4Q3TT99 632 aa9.11□□□□□ -0.95
Ccdc28a-201ENSMUST00000052648 LbrQ3U9G9 626 aaKnown RBP9.11□□□□□ -0.95
Ccdc28a-201ENSMUST00000052648 Rcsd1Q3UZA1 412 aa9.11□□□□□ -0.95
Ccdc28a-201ENSMUST00000052648 Creb3Q61817 404 aa9.11□□□□□ -0.95
Ccdc28a-201ENSMUST00000052648 Hmgb4Q6P8W9 181 aa9.11□□□□□ -0.95
Ccdc28a-201ENSMUST00000052648 SheQ8BSD5 492 aa9.11□□□□□ -0.95
Ccdc28a-201ENSMUST00000052648 C5ar2Q8BW93 344 aa9.11□□□□□ -0.95
Ccdc28a-201ENSMUST00000052648 TdrpQ8C5P7 182 aa9.11□□□□□ -0.95
Ccdc28a-201ENSMUST00000052648 Atg14Q8CDJ3 492 aa9.11□□□□□ -0.95
Ccdc28a-201ENSMUST00000052648 Mmgt1Q8K273 131 aaKnown RBP9.11□□□□□ -0.95
Ccdc28a-201ENSMUST00000052648 Pitrm1Q8K411 1036 aaKnown RBP9.11□□□□□ -0.95
Ccdc28a-201ENSMUST00000052648 Usp15Q8R5H1 981 aa9.11□□□□□ -0.95
Ccdc28a-201ENSMUST00000052648 Nek8Q91ZR4 698 aa9.11□□□□□ -0.95
Ccdc28a-201ENSMUST00000052648 FdpsQ920E5 353 aa9.11□□□□□ -0.95
Ccdc28a-201ENSMUST00000052648 Gtf2ird2Q99NI3 936 aa9.11□□□□□ -0.95
Ccdc28a-201ENSMUST00000052648 Cyp2c55Q9D816 490 aa9.11□□□□□ -0.95
Ccdc28a-201ENSMUST00000052648 Wdr83Q9DAJ4 315 aaKnown RBP9.11□□□□□ -0.95
Ccdc28a-201ENSMUST00000052648 Fundc1Q9DB70 155 aa9.11□□□□□ -0.95
Ccdc28a-201ENSMUST00000052648 Irx5Q9JKQ4 484 aa9.11□□□□□ -0.95
Ccdc28a-201ENSMUST00000052648 Dnajb1Q9QYJ3 340 aaKnown RBP9.11□□□□□ -0.95
Ccdc28a-201ENSMUST00000052648 Chrna6Q9R0W9 494 aa9.11□□□□□ -0.95
Ccdc28a-201ENSMUST00000052648 Diaph3Q9Z207 1171 aa9.11□□□□□ -0.95
Ccdc28a-201ENSMUST00000052648 Ankrd34aB2RW11 495 aa9.1□□□□□ -0.95
Ccdc28a-201ENSMUST00000052648 Olfr414E9Q5P8 317 aa9.1□□□□□ -0.95
Ccdc28a-201ENSMUST00000052648 BC024978J3QPC3 361 aa9.1□□□□□ -0.95
Ccdc28a-201ENSMUST00000052648 Vmn2r88L7N1W8 857 aa9.1□□□□□ -0.95
Ccdc28a-201ENSMUST00000052648 Ptch2O35595 1182 aa9.1□□□□□ -0.95
Ccdc28a-201ENSMUST00000052648 Zfp1P08042 402 aa9.1□□□□□ -0.95
Ccdc28a-201ENSMUST00000052648 Becn2P0DM65 447 aa9.1□□□□□ -0.95
Ccdc28a-201ENSMUST00000052648 TshrP47750 764 aa9.1□□□□□ -0.95
Ccdc28a-201ENSMUST00000052648 Sash1P59808 1230 aa9.1□□□□□ -0.95
Ccdc28a-201ENSMUST00000052648 Olfm3P63056 478 aa9.1□□□□□ -0.95
Ccdc28a-201ENSMUST00000052648 4930502E18RikQ14BQ3 236 aa9.1□□□□□ -0.95
Ccdc28a-201ENSMUST00000052648 Fzd6Q61089 709 aa9.1□□□□□ -0.95
Ccdc28a-201ENSMUST00000052648 Hsph1Q61699 858 aaKnown RBP9.1□□□□□ -0.95
Ccdc28a-201ENSMUST00000052648 Q66JV7 365 aa9.1□□□□□ -0.95
Ccdc28a-201ENSMUST00000052648 Naif1Q6PFD7 327 aa9.1□□□□□ -0.95
Ccdc28a-201ENSMUST00000052648 Ublcp1Q8BGR9 318 aa9.1□□□□□ -0.95
Ccdc28a-201ENSMUST00000052648 Timm29Q8BGX2 266 aa9.1□□□□□ -0.95
Ccdc28a-201ENSMUST00000052648 Noc4lQ8BHY2 516 aa9.1□□□□□ -0.95
Ccdc28a-201ENSMUST00000052648 Bend7Q8BSV3 434 aa9.1□□□□□ -0.95
Ccdc28a-201ENSMUST00000052648 Sept10Q8C650 452 aa9.1□□□□□ -0.95
Ccdc28a-201ENSMUST00000052648 Pde10aQ8CA95 790 aa9.1□□□□□ -0.95
Ccdc28a-201ENSMUST00000052648 Sirt5Q8K2C6 310 aa9.1□□□□□ -0.95
Ccdc28a-201ENSMUST00000052648 Ube2q2Q8K2Z8 378 aa9.1□□□□□ -0.95
Ccdc28a-201ENSMUST00000052648 Mkl1Q8K4J6 964 aa9.1□□□□□ -0.95
Ccdc28a-201ENSMUST00000052648 Ccdc137Q8R0K4 290 aaKnown RBP9.1□□□□□ -0.95
Ccdc28a-201ENSMUST00000052648 Acsf2Q8VCW8 615 aa9.1□□□□□ -0.95
Ccdc28a-201ENSMUST00000052648 Fkbp6Q91XW8 327 aa9.1□□□□□ -0.95
Ccdc28a-201ENSMUST00000052648 Oas1cQ924S2 362 aa9.1□□□□□ -0.95
Ccdc28a-201ENSMUST00000052648 March2Q99M02 246 aa9.1□□□□□ -0.95
Retrieved 100 of 22,080 RNA–protein pairs in 26.6 ms