RNA–Protein interactions for RNA: ENSMUST00000030992.12

Rnf4-201, Transcript of E3 ubiquitin-protein ligase RNF4, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Rnf4, Length 2,895 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf4-201ENSMUST00000030992 Tsga13Q9DA17 273 aa13.02□□□□□ -0.33
Rnf4-201ENSMUST00000030992 Il17rbQ9JIP3 499 aa13.02□□□□□ -0.33
Rnf4-201ENSMUST00000030992 ErmapQ9JLN5 566 aa13.02□□□□□ -0.33
Rnf4-201ENSMUST00000030992 Ptpn4Q9WU22 926 aa13.02□□□□□ -0.33
Rnf4-201ENSMUST00000030992 Sh2d4bA6X942 431 aa13.01□□□□□ -0.33
Rnf4-201ENSMUST00000030992 Kifc5bE9PUA5 672 aa13.01□□□□□ -0.33
Rnf4-201ENSMUST00000030992 Hsd17b7O88736 334 aa13.01□□□□□ -0.33
Rnf4-201ENSMUST00000030992 KitP05532 979 aa13.01□□□□□ -0.33
Rnf4-201ENSMUST00000030992 BpgmP15327 259 aa13.01□□□□□ -0.33
Rnf4-201ENSMUST00000030992 Gja8P28236 440 aa13.01□□□□□ -0.33
Rnf4-201ENSMUST00000030992 Slc6a13P31649 602 aa13.01□□□□□ -0.33
Rnf4-201ENSMUST00000030992 Rpl10aP53026 217 aaKnown RBP13.01□□□□□ -0.33
Rnf4-201ENSMUST00000030992 Fam171bQ14CH0 825 aa13.01□□□□□ -0.33
Rnf4-201ENSMUST00000030992 B3gntl1Q3U129 357 aa13.01□□□□□ -0.33
Rnf4-201ENSMUST00000030992 Stxbp5lQ5DQR4 1185 aa13.01□□□□□ -0.33
Rnf4-201ENSMUST00000030992 ProcrQ64695 242 aa13.01□□□□□ -0.33
Rnf4-201ENSMUST00000030992 Paqr6Q6TCG5 343 aa13.01□□□□□ -0.33
Rnf4-201ENSMUST00000030992 Acbd3Q8BMP6 525 aa13.01□□□□□ -0.33
Rnf4-201ENSMUST00000030992 Dhrs7bQ99J47 323 aa13.01□□□□□ -0.33
Rnf4-201ENSMUST00000030992 Slc13a1Q9JHI4 594 aa13.01□□□□□ -0.33
Rnf4-201ENSMUST00000030992 Dnajb7Q9QYI8 312 aa13.01□□□□□ -0.33
Rnf4-201ENSMUST00000030992 Osbpl8B9EJ86 889 aa13.01□□□□□ -0.33
Rnf4-201ENSMUST00000030992 Morc3F7BJB9 942 aaKnown RBP13.01□□□□□ -0.33
Rnf4-201ENSMUST00000030992 Gm20503G3UZK1 150 aa13.01□□□□□ -0.33
Rnf4-201ENSMUST00000030992 Cdh16O88338 830 aa13.01□□□□□ -0.33
Rnf4-201ENSMUST00000030992 ChgbP16014 677 aa13.01□□□□□ -0.33
Rnf4-201ENSMUST00000030992 Kpnb1P70168 876 aaKnown RBP13.01□□□□□ -0.33
Rnf4-201ENSMUST00000030992 SPINDOCQ05AH6 381 aa13.01□□□□□ -0.33
Rnf4-201ENSMUST00000030992 Fscn1Q61553 493 aa13.01□□□□□ -0.33
Rnf4-201ENSMUST00000030992 Abhd10Q6PE15 297 aa13.01□□□□□ -0.33
Rnf4-201ENSMUST00000030992 Slc16a9Q7TM99 508 aa13.01□□□□□ -0.33
Rnf4-201ENSMUST00000030992 Abcg2Q7TMS5 657 aa13.01□□□□□ -0.33
Rnf4-201ENSMUST00000030992 TraipQ8VIG6 470 aa13.01□□□□□ -0.33
Rnf4-201ENSMUST00000030992 Pcdha11Q91Y19 950 aa13.01□□□□□ -0.33
Rnf4-201ENSMUST00000030992 Klhdc8bQ9D2D9 354 aa13.01□□□□□ -0.33
Rnf4-201ENSMUST00000030992 CabyrQ9D424 453 aa13.01□□□□□ -0.33
Rnf4-201ENSMUST00000030992 Klhdc7bA0A286YD60 1263 aa13□□□□□ -0.33
Rnf4-201ENSMUST00000030992 Olfr1160A2AVT0 319 aa13□□□□□ -0.33
Rnf4-201ENSMUST00000030992 Ets2P15037 468 aa13□□□□□ -0.33
Rnf4-201ENSMUST00000030992 Cd86P42082 309 aa13□□□□□ -0.33
Rnf4-201ENSMUST00000030992 Ccng1P51945 294 aa13□□□□□ -0.33
Rnf4-201ENSMUST00000030992 Mc4rP56450 332 aa13□□□□□ -0.33
Rnf4-201ENSMUST00000030992 Thumpd3P97770 505 aa13□□□□□ -0.33
Rnf4-201ENSMUST00000030992 Arid5aQ3U108 590 aa13□□□□□ -0.33
Rnf4-201ENSMUST00000030992 Grm5Q3UVX5 1203 aa13□□□□□ -0.33
Rnf4-201ENSMUST00000030992 Rad9bQ6WBX7 403 aa13□□□□□ -0.33
Rnf4-201ENSMUST00000030992 Arhgap29Q8CGF1 1266 aa13□□□□□ -0.33
Rnf4-201ENSMUST00000030992 Prrg2Q8R182 198 aa13□□□□□ -0.33
Rnf4-201ENSMUST00000030992 Snx15Q91WE1 337 aa13□□□□□ -0.33
Rnf4-201ENSMUST00000030992 Vangl2Q91ZD4 521 aa13□□□□□ -0.33
Rnf4-201ENSMUST00000030992 Reep3Q99KK1 254 aa13□□□□□ -0.33
Rnf4-201ENSMUST00000030992 Ndufaf1Q9CWX2 328 aa13□□□□□ -0.33
Rnf4-201ENSMUST00000030992 GmprQ9DCZ1 345 aa13□□□□□ -0.33
Rnf4-201ENSMUST00000030992 Tdp2Q9JJX7 370 aa13□□□□□ -0.33
Rnf4-201ENSMUST00000030992 NbnQ9R207 751 aa13□□□□□ -0.33
Rnf4-201ENSMUST00000030992 Trbv4A0A075B5I2 113 aa13□□□□□ -0.33
Rnf4-201ENSMUST00000030992 Serpinb3cA2RSF9 386 aa13□□□□□ -0.33
Rnf4-201ENSMUST00000030992 Gm10250G3X9L6 160 aaKnown RBP13□□□□□ -0.33
Rnf4-201ENSMUST00000030992 BC024978J3QPC3 361 aa13□□□□□ -0.33
Rnf4-201ENSMUST00000030992 Cd2P08920 344 aa13□□□□□ -0.33
Rnf4-201ENSMUST00000030992 Gdf6P43028 454 aa13□□□□□ -0.33
Rnf4-201ENSMUST00000030992 Vps4bP46467 444 aaKnown RBP13□□□□□ -0.33
Rnf4-201ENSMUST00000030992 Csrp3P50462 194 aa13□□□□□ -0.33
Rnf4-201ENSMUST00000030992 Apobec1P51908 229 aaKnown RBP13□□□□□ -0.33
Rnf4-201ENSMUST00000030992 Crnkl1P63154 690 aaKnown RBP13□□□□□ -0.33
Rnf4-201ENSMUST00000030992 Pik3r6Q3U6Q4 756 aa13□□□□□ -0.33
Rnf4-201ENSMUST00000030992 Snx21Q3UR97 363 aa13□□□□□ -0.33
Rnf4-201ENSMUST00000030992 Bcar1Q61140 874 aa13□□□□□ -0.33
Rnf4-201ENSMUST00000030992 Sema3cQ62181 751 aa13□□□□□ -0.33
Rnf4-201ENSMUST00000030992 Atp2a3Q64518 1038 aa13□□□□□ -0.33
Rnf4-201ENSMUST00000030992 Msantd1Q8BIL2 278 aa13□□□□□ -0.33
Rnf4-201ENSMUST00000030992 Tmem74Q8BQU7 305 aa13□□□□□ -0.33
Rnf4-201ENSMUST00000030992 Tlk1Q8C0V0 766 aa13□□□□□ -0.33
Rnf4-201ENSMUST00000030992 Wdr60Q8C761 999 aa13□□□□□ -0.33
Rnf4-201ENSMUST00000030992 Trim61Q8JZK6 461 aa13□□□□□ -0.33
Rnf4-201ENSMUST00000030992 Slc22a19Q8VCA0 551 aa13□□□□□ -0.33
Rnf4-201ENSMUST00000030992 Agap3Q8VHH5 910 aa13□□□□□ -0.33
Rnf4-201ENSMUST00000030992 Zcchc14Q8VIG0 956 aa13□□□□□ -0.33
Rnf4-201ENSMUST00000030992 Msi2Q920Q6 346 aaKnown RBP13□□□□□ -0.33
Rnf4-201ENSMUST00000030992 Tekt2Q922G7 430 aa13□□□□□ -0.33
Rnf4-201ENSMUST00000030992 Oxct1Q9D0K2 520 aaKnown RBP13□□□□□ -0.33
Rnf4-201ENSMUST00000030992 Atp5hQ9DCX2 161 aa13□□□□□ -0.33
Rnf4-201ENSMUST00000030992 Gm45713A0A1B0GS68 446 aa12.99□□□□□ -0.33
Rnf4-201ENSMUST00000030992 P01641 117 aa12.99□□□□□ -0.33
Rnf4-201ENSMUST00000030992 Smad1P70340 465 aa12.99□□□□□ -0.33
Rnf4-201ENSMUST00000030992 Lypla1P97823 230 aa12.99□□□□□ -0.33
Rnf4-201ENSMUST00000030992 Fscn2Q32M02 492 aa12.99□□□□□ -0.33
Rnf4-201ENSMUST00000030992 Trafd1Q3UDK1 580 aa12.99□□□□□ -0.33
Rnf4-201ENSMUST00000030992 ADGRF3Q58Y75 991 aa12.99□□□□□ -0.33
Rnf4-201ENSMUST00000030992 Znf148Q61624 794 aa12.99□□□□□ -0.33
Rnf4-201ENSMUST00000030992 Cd300aQ6SJQ0 318 aa12.99□□□□□ -0.33
Rnf4-201ENSMUST00000030992 Chn2Q80XD1 332 aa12.99□□□□□ -0.33
Rnf4-201ENSMUST00000030992 Ddx42Q810A7 929 aaKnown RBP12.99□□□□□ -0.33
Rnf4-201ENSMUST00000030992 Fbxw8Q8BIA4 598 aa12.99□□□□□ -0.33
Rnf4-201ENSMUST00000030992 Robo4Q8C310 1012 aa12.99□□□□□ -0.33
Rnf4-201ENSMUST00000030992 Acad10Q8K370 1069 aa12.99□□□□□ -0.33
Rnf4-201ENSMUST00000030992 Vmn1r191Q8K4D0 298 aa12.99□□□□□ -0.33
Rnf4-201ENSMUST00000030992 Hip1Q8VD75 1029 aaKnown RBP12.99□□□□□ -0.33
Rnf4-201ENSMUST00000030992 Tbc1d19Q8VDV7 526 aa12.99□□□□□ -0.33
Rnf4-201ENSMUST00000030992 Sorcs3Q8VI51 1219 aa12.99□□□□□ -0.33
Retrieved 100 of 22,080 RNA–protein pairs in 54.4 ms