RNA–Protein interactions for RNA: ENSMUST00000005705.7

Trim28-201, Transcript of Transcription intermediary factor 1-beta, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim28, Length 3,245 nt, Biotype protein coding, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim28-201ENSMUST00000005705 D3Z070 196 aa16.57■□□□□ 0.24
Trim28-201ENSMUST00000005705 Ccdc144bE9PVZ3 520 aa16.57■□□□□ 0.24
Trim28-201ENSMUST00000005705 Vmn1r39G3UWE6 305 aa16.57■□□□□ 0.24
Trim28-201ENSMUST00000005705 Tnk2O54967 1055 aa16.57■□□□□ 0.24
Trim28-201ENSMUST00000005705 CblP22682 913 aa16.57■□□□□ 0.24
Trim28-201ENSMUST00000005705 PrkcdP28867 674 aa16.57■□□□□ 0.24
Trim28-201ENSMUST00000005705 Aqp4P55088 323 aa16.57■□□□□ 0.24
Trim28-201ENSMUST00000005705 Cog7Q3UM29 770 aa16.57■□□□□ 0.24
Trim28-201ENSMUST00000005705 Fam214aQ69ZK7 1075 aa16.57■□□□□ 0.24
Trim28-201ENSMUST00000005705 Trnp1Q80ZI1 223 aa16.57■□□□□ 0.24
Trim28-201ENSMUST00000005705 Utp11Q9CZJ1 253 aaKnown RBP16.57■□□□□ 0.24
Trim28-201ENSMUST00000005705 Borcs5Q9D920 195 aa16.57■□□□□ 0.24
Trim28-201ENSMUST00000005705 Plscr2Q9DCW2 307 aa16.57■□□□□ 0.24
Trim28-201ENSMUST00000005705 Cyp4f14Q9EP75 524 aa16.57■□□□□ 0.24
Trim28-201ENSMUST00000005705 Trim54Q9ERP3 366 aa16.57■□□□□ 0.24
Trim28-201ENSMUST00000005705 ParvbQ9ES46 365 aa16.57■□□□□ 0.24
Trim28-201ENSMUST00000005705 Nrip2Q9JHR9 270 aa16.57■□□□□ 0.24
Trim28-201ENSMUST00000005705 Gm4302E9PX25 294 aa16.57■□□□□ 0.24
Trim28-201ENSMUST00000005705 Grip2G3XA20 1042 aa16.57■□□□□ 0.24
Trim28-201ENSMUST00000005705 Per3O70361 1113 aa16.57■□□□□ 0.24
Trim28-201ENSMUST00000005705 LynP25911 512 aa16.57■□□□□ 0.24
Trim28-201ENSMUST00000005705 Snx27Q3UHD6 539 aa16.57■□□□□ 0.24
Trim28-201ENSMUST00000005705 Cyp2d40Q6P8N9 338 aa16.57■□□□□ 0.24
Trim28-201ENSMUST00000005705 Abhd10Q6PE15 297 aa16.57■□□□□ 0.24
Trim28-201ENSMUST00000005705 Sema3dQ8BH34 777 aa16.57■□□□□ 0.24
Trim28-201ENSMUST00000005705 Spag16Q8K450 639 aa16.57■□□□□ 0.24
Trim28-201ENSMUST00000005705 Ankrd49Q8VE42 238 aa16.57■□□□□ 0.24
Trim28-201ENSMUST00000005705 FdpsQ920E5 353 aa16.57■□□□□ 0.24
Trim28-201ENSMUST00000005705 CrotQ9DC50 612 aa16.57■□□□□ 0.24
Trim28-201ENSMUST00000005705 Strn3Q9ERG2 796 aa16.57■□□□□ 0.24
Trim28-201ENSMUST00000005705 Rbck1Q9WUB0 508 aa16.57■□□□□ 0.24
Trim28-201ENSMUST00000005705 Gm10720D3Z1I5 223 aa16.57■□□□□ 0.24
Trim28-201ENSMUST00000005705 Gm5930D3Z257 264 aa16.57■□□□□ 0.24
Trim28-201ENSMUST00000005705 Ism2D3Z6A3 493 aa16.57■□□□□ 0.24
Trim28-201ENSMUST00000005705 Ccnb1P24860 430 aa16.57■□□□□ 0.24
Trim28-201ENSMUST00000005705 Arl4aP61213 200 aa16.57■□□□□ 0.24
Trim28-201ENSMUST00000005705 IhhP97812 411 aa16.57■□□□□ 0.24
Trim28-201ENSMUST00000005705 Mthfd1lQ3V3R1 977 aaKnown RBP16.57■□□□□ 0.24
Trim28-201ENSMUST00000005705 Etaa1Q5SVT3 877 aa16.57■□□□□ 0.24
Trim28-201ENSMUST00000005705 Atp2a3Q64518 1038 aa16.57■□□□□ 0.24
Trim28-201ENSMUST00000005705 ScapQ6GQT6 1276 aa16.57■□□□□ 0.24
Trim28-201ENSMUST00000005705 Arl5cQ6P068 179 aa16.57■□□□□ 0.24
Trim28-201ENSMUST00000005705 Zdhhc15Q8BGJ0 337 aa16.57■□□□□ 0.24
Trim28-201ENSMUST00000005705 Rsl1d1Q8BVY0 452 aaKnown RBP16.57■□□□□ 0.24
Trim28-201ENSMUST00000005705 Def8Q99J78 448 aa16.57■□□□□ 0.24
Trim28-201ENSMUST00000005705 Unc45aQ99KD5 944 aa16.57■□□□□ 0.24
Trim28-201ENSMUST00000005705 Decr1Q9CQ62 335 aaKnown RBP16.57■□□□□ 0.24
Trim28-201ENSMUST00000005705 PllpQ9DCU2 182 aa16.57■□□□□ 0.24
Trim28-201ENSMUST00000005705 Rasgrp2Q9QUG9 608 aa16.57■□□□□ 0.24
Trim28-201ENSMUST00000005705 Nrf1Q9WU00 503 aa16.57■□□□□ 0.24
Trim28-201ENSMUST00000005705 Edil3O35474 480 aa16.56■□□□□ 0.24
Trim28-201ENSMUST00000005705 ItgavP43406 1044 aa16.56■□□□□ 0.24
Trim28-201ENSMUST00000005705 Fdft1P53798 416 aa16.56■□□□□ 0.24
Trim28-201ENSMUST00000005705 Mcm9Q2KHI9 1134 aa16.56■□□□□ 0.24
Trim28-201ENSMUST00000005705 Fam71bQ5STT6 665 aa16.56■□□□□ 0.24
Trim28-201ENSMUST00000005705 Cntn2Q61330 1040 aa16.56■□□□□ 0.24
Trim28-201ENSMUST00000005705 Znf513Q6PD29 541 aa16.56■□□□□ 0.24
Trim28-201ENSMUST00000005705 Baiap2l2Q80Y61 522 aa16.56■□□□□ 0.24
Trim28-201ENSMUST00000005705 GnsQ8BFR4 544 aa16.56■□□□□ 0.24
Trim28-201ENSMUST00000005705 Msi2Q920Q6 346 aaKnown RBP16.56■□□□□ 0.24
Trim28-201ENSMUST00000005705 Fam227bQ9D518 532 aa16.56■□□□□ 0.24
Trim28-201ENSMUST00000005705 Kat2bQ9JHD1 813 aa16.56■□□□□ 0.24
Trim28-201ENSMUST00000005705 RalbQ9JIW9 206 aa16.56■□□□□ 0.24
Trim28-201ENSMUST00000005705 Cpxm1Q9Z100 722 aa16.56■□□□□ 0.24
Trim28-201ENSMUST00000005705 PhipQ8VDD9 1821 aaKnown RBP16.56■□□□□ 0.24
Trim28-201ENSMUST00000005705 Spata31E9QAF0 1014 aa16.56■□□□□ 0.24
Trim28-201ENSMUST00000005705 Vmn2r100E9QAZ9 850 aa16.56■□□□□ 0.24
Trim28-201ENSMUST00000005705 OmdO35103 423 aa16.56■□□□□ 0.24
Trim28-201ENSMUST00000005705 AlbP07724 608 aa16.56■□□□□ 0.24
Trim28-201ENSMUST00000005705 Il1rl1P14719 567 aa16.56■□□□□ 0.24
Trim28-201ENSMUST00000005705 Olfm3P63056 478 aa16.56■□□□□ 0.24
Trim28-201ENSMUST00000005705 Sycp3P70281 254 aa16.56■□□□□ 0.24
Trim28-201ENSMUST00000005705 Trim71Q1PSW8 855 aaKnown RBP16.56■□□□□ 0.24
Trim28-201ENSMUST00000005705 StgQ8BM15 349 aa16.56■□□□□ 0.24
Trim28-201ENSMUST00000005705 Tmem209Q8BRG8 561 aaKnown RBP16.56■□□□□ 0.24
Trim28-201ENSMUST00000005705 Washc5Q8C2E7 1159 aaKnown RBP16.56■□□□□ 0.24
Trim28-201ENSMUST00000005705 Gsto2Q8K2Q2 248 aa16.56■□□□□ 0.24
Trim28-201ENSMUST00000005705 Pdia5Q921X9 517 aa16.56■□□□□ 0.24
Trim28-201ENSMUST00000005705 Mcrs1Q99L90 462 aa16.56■□□□□ 0.24
Trim28-201ENSMUST00000005705 Thg1lQ9CY52 298 aa16.56■□□□□ 0.24
Trim28-201ENSMUST00000005705 Fut2Q9JL27 347 aa16.56■□□□□ 0.24
Trim28-201ENSMUST00000005705 NrapQ80XB4 1728 aa16.55■□□□□ 0.24
Trim28-201ENSMUST00000005705 Pdia2D3Z6P0 527 aa16.55■□□□□ 0.24
Trim28-201ENSMUST00000005705 Olfr600E9PUN7 314 aa16.55■□□□□ 0.24
Trim28-201ENSMUST00000005705 Kif6E9PX57 802 aa16.55■□□□□ 0.24
Trim28-201ENSMUST00000005705 Top6blJ3QMY9 579 aa16.55■□□□□ 0.24
Trim28-201ENSMUST00000005705 Sypl2O89104 264 aa16.55■□□□□ 0.24
Trim28-201ENSMUST00000005705 IppP28575 584 aa16.55■□□□□ 0.24
Trim28-201ENSMUST00000005705 Cd36Q08857 472 aa16.55■□□□□ 0.24
Trim28-201ENSMUST00000005705 Pitpnm3Q3UHE1 974 aa16.55■□□□□ 0.24
Trim28-201ENSMUST00000005705 MyrfQ3UR85 1138 aa16.55■□□□□ 0.24
Trim28-201ENSMUST00000005705 Utp14bQ6EJB6 756 aaKnown RBP16.55■□□□□ 0.24
Trim28-201ENSMUST00000005705 DstykQ6XUX1 927 aa16.55■□□□□ 0.24
Trim28-201ENSMUST00000005705 Olfr798Q7TRH8 311 aa16.55■□□□□ 0.24
Trim28-201ENSMUST00000005705 Kcng4Q80XM3 506 aa16.55■□□□□ 0.24
Trim28-201ENSMUST00000005705 Fzd10Q8BKG4 582 aa16.55■□□□□ 0.24
Trim28-201ENSMUST00000005705 Psd4Q8BLR5 1005 aa16.55■□□□□ 0.24
Trim28-201ENSMUST00000005705 Sept10Q8C650 452 aa16.55■□□□□ 0.24
Trim28-201ENSMUST00000005705 MyocdQ8VIM5 935 aa16.55■□□□□ 0.24
Trim28-201ENSMUST00000005705 Grk2Q99MK8 689 aa16.55■□□□□ 0.24
Retrieved 100 of 22,080 RNA–protein pairs in 37.2 ms