RNA–Protein interactions for RNA: ENSMUST00000002708.4

Shh-201, Transcript of Sonic hedgehog protein, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Shh, Length 2,847 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Shh-201ENSMUST00000002708 Drc3Q9D5E4 523 aa16.81■□□□□ 0.28
Shh-201ENSMUST00000002708 Krt7Q9DCV7 457 aa16.81■□□□□ 0.28
Shh-201ENSMUST00000002708 Cacng4Q9JJV4 327 aa16.81■□□□□ 0.28
Shh-201ENSMUST00000002708 NumbQ9QZS3 653 aa16.81■□□□□ 0.28
Shh-201ENSMUST00000002708 RpgrQ9R0X5 1001 aa16.81■□□□□ 0.28
Shh-201ENSMUST00000002708 Nme3Q9WV85 169 aa16.81■□□□□ 0.28
Shh-201ENSMUST00000002708 Gucy2dA0A0U1RPR8 1117 aa16.8■□□□□ 0.28
Shh-201ENSMUST00000002708 Ttc3O88196 1979 aaKnown RBP16.8■□□□□ 0.28
Shh-201ENSMUST00000002708 ChgbP16014 677 aa16.8■□□□□ 0.28
Shh-201ENSMUST00000002708 Tac1P41539 130 aa16.8■□□□□ 0.28
Shh-201ENSMUST00000002708 Cdk7Q03147 346 aa16.8■□□□□ 0.28
Shh-201ENSMUST00000002708 Gata6Q61169 589 aa16.8■□□□□ 0.28
Shh-201ENSMUST00000002708 Armcx2Q6A058 784 aaKnown RBP16.8■□□□□ 0.28
Shh-201ENSMUST00000002708 Scube1Q6NZL8 1018 aa16.8■□□□□ 0.28
Shh-201ENSMUST00000002708 Olfr533Q7TRT7 320 aa16.8■□□□□ 0.28
Shh-201ENSMUST00000002708 SybuQ8BHS8 665 aa16.8■□□□□ 0.28
Shh-201ENSMUST00000002708 Ankrd52Q8BTI7 1076 aa16.8■□□□□ 0.28
Shh-201ENSMUST00000002708 Pak5Q8C015 719 aa16.8■□□□□ 0.28
Shh-201ENSMUST00000002708 Nudt13Q8JZU0 352 aa16.8■□□□□ 0.28
Shh-201ENSMUST00000002708 Nsmce2Q91VT1 247 aa16.8■□□□□ 0.28
Shh-201ENSMUST00000002708 Krt5Q922U2 580 aa16.8■□□□□ 0.28
Shh-201ENSMUST00000002708 Tpgs1Q99MS8 303 aa16.8■□□□□ 0.28
Shh-201ENSMUST00000002708 Serpinb9bQ9DAV6 377 aa16.8■□□□□ 0.28
Shh-201ENSMUST00000002708 Dcaf6Q9DC22 876 aa16.8■□□□□ 0.28
Shh-201ENSMUST00000002708 QkiQ9QYS9 341 aaKnown RBP16.8■□□□□ 0.28
Shh-201ENSMUST00000002708 C87414E9PWI7 475 aa16.8■□□□□ 0.28
Shh-201ENSMUST00000002708 Zfp651E9PZ11 729 aa16.8■□□□□ 0.28
Shh-201ENSMUST00000002708 Vmn1r39G3UWE6 305 aa16.8■□□□□ 0.28
Shh-201ENSMUST00000002708 HcrtO55241 130 aa16.8■□□□□ 0.28
Shh-201ENSMUST00000002708 Hsd11b2P51661 386 aa16.8■□□□□ 0.28
Shh-201ENSMUST00000002708 SelpQ01102 768 aa16.8■□□□□ 0.28
Shh-201ENSMUST00000002708 McuQ3UMR5 350 aa16.8■□□□□ 0.28
Shh-201ENSMUST00000002708 Otol1Q4ZJM7 482 aa16.8■□□□□ 0.28
Shh-201ENSMUST00000002708 AcdQ5EE38 416 aa16.8■□□□□ 0.28
Shh-201ENSMUST00000002708 Cfap52Q5F201 620 aa16.8■□□□□ 0.28
Shh-201ENSMUST00000002708 Wdr91Q7TMQ7 748 aa16.8■□□□□ 0.28
Shh-201ENSMUST00000002708 Baiap2l2Q80Y61 522 aa16.8■□□□□ 0.28
Shh-201ENSMUST00000002708 Kansl2Q8BQR4 486 aa16.8■□□□□ 0.28
Shh-201ENSMUST00000002708 Slc36a1Q8K4D3 475 aa16.8■□□□□ 0.28
Shh-201ENSMUST00000002708 Myo16Q5DU14 1919 aa16.79■□□□□ 0.28
Shh-201ENSMUST00000002708 Pcna-ps2A0A140T8V5 261 aa16.79■□□□□ 0.28
Shh-201ENSMUST00000002708 Dnmt3bO88509 859 aa16.79■□□□□ 0.28
Shh-201ENSMUST00000002708 PcnaP17918 261 aa16.79■□□□□ 0.28
Shh-201ENSMUST00000002708 Aqp4P55088 323 aa16.79■□□□□ 0.28
Shh-201ENSMUST00000002708 Cdo1P60334 200 aa16.79■□□□□ 0.28
Shh-201ENSMUST00000002708 Nploc4P60670 608 aa16.79■□□□□ 0.28
Shh-201ENSMUST00000002708 Ndst1Q3UHN9 882 aa16.79■□□□□ 0.28
Shh-201ENSMUST00000002708 Fbxo39Q5NBU5 443 aa16.79■□□□□ 0.28
Shh-201ENSMUST00000002708 Gramd1bQ80TI0 738 aa16.79■□□□□ 0.28
Shh-201ENSMUST00000002708 Suz12Q80U70 741 aaKnown RBP16.79■□□□□ 0.28
Shh-201ENSMUST00000002708 CherpQ8CGZ0 936 aaKnown RBP16.79■□□□□ 0.28
Shh-201ENSMUST00000002708 Mark4Q8CIP4 752 aa16.79■□□□□ 0.28
Shh-201ENSMUST00000002708 Ace2Q8R0I0 805 aa16.79■□□□□ 0.28
Shh-201ENSMUST00000002708 Nup85Q8R480 656 aaKnown RBP16.79■□□□□ 0.28
Shh-201ENSMUST00000002708 Pdia5Q921X9 517 aa16.79■□□□□ 0.28
Shh-201ENSMUST00000002708 Snx29Q9D3S3 818 aa16.79■□□□□ 0.28
Shh-201ENSMUST00000002708 Cldn22Q9D7U6 220 aa16.79■□□□□ 0.28
Shh-201ENSMUST00000002708 St6galnac4Q9R2B6 360 aa16.79■□□□□ 0.28
Shh-201ENSMUST00000002708 Exoc7O35250 697 aa16.79■□□□□ 0.28
Shh-201ENSMUST00000002708 Pold2O35654 469 aa16.79■□□□□ 0.28
Shh-201ENSMUST00000002708 SiaeP70665 541 aa16.79■□□□□ 0.28
Shh-201ENSMUST00000002708 Lrrc74bQ14BP6 391 aa16.79■□□□□ 0.28
Shh-201ENSMUST00000002708 Armc12Q80X86 340 aa16.79■□□□□ 0.28
Shh-201ENSMUST00000002708 Sema3dQ8BH34 777 aa16.79■□□□□ 0.28
Shh-201ENSMUST00000002708 Pnma2Q8BHK0 365 aa16.79■□□□□ 0.28
Shh-201ENSMUST00000002708 CopaQ8CIE6 1224 aaKnown RBP16.79■□□□□ 0.28
Shh-201ENSMUST00000002708 Fam83aQ8K2P2 436 aa16.79■□□□□ 0.28
Shh-201ENSMUST00000002708 Slc25a3Q8VEM8 357 aaKnown RBP16.79■□□□□ 0.28
Shh-201ENSMUST00000002708 Snx15Q91WE1 337 aa16.79■□□□□ 0.28
Shh-201ENSMUST00000002708 Med21Q9CQ39 144 aa16.79■□□□□ 0.28
Shh-201ENSMUST00000002708 Psmd8Q9CX56 353 aa16.79■□□□□ 0.28
Shh-201ENSMUST00000002708 Pi16Q9ET66 489 aa16.79■□□□□ 0.28
Shh-201ENSMUST00000002708 RalbQ9JIW9 206 aa16.79■□□□□ 0.28
Shh-201ENSMUST00000002708 Gm281D3Z1Y0 860 aa16.78■□□□□ 0.28
Shh-201ENSMUST00000002708 Vmn2r100E9QAZ9 850 aa16.78■□□□□ 0.28
Shh-201ENSMUST00000002708 Mllt10O54826 1068 aa16.78■□□□□ 0.28
Shh-201ENSMUST00000002708 Akap10O88845 662 aa16.78■□□□□ 0.28
Shh-201ENSMUST00000002708 Rps6ka3P18654 740 aaKnown RBP16.78■□□□□ 0.28
Shh-201ENSMUST00000002708 Arl4aP61213 200 aa16.78■□□□□ 0.28
Shh-201ENSMUST00000002708 UtyP79457 1212 aa16.78■□□□□ 0.28
Shh-201ENSMUST00000002708 RetsatQ64FW2 609 aa16.78■□□□□ 0.28
Shh-201ENSMUST00000002708 Olfr1105Q7TR58 312 aa16.78■□□□□ 0.28
Shh-201ENSMUST00000002708 GnsQ8BFR4 544 aa16.78■□□□□ 0.28
Shh-201ENSMUST00000002708 CcnyQ8BGU5 341 aa16.78■□□□□ 0.28
Shh-201ENSMUST00000002708 Hspbap1Q8BK58 483 aa16.78■□□□□ 0.28
Shh-201ENSMUST00000002708 Usp3Q91W36 520 aaKnown RBP16.78■□□□□ 0.28
Shh-201ENSMUST00000002708 Krcc1Q99JT5 256 aa16.78■□□□□ 0.28
Shh-201ENSMUST00000002708 Ogfod2Q9CQ04 349 aa16.78■□□□□ 0.28
Shh-201ENSMUST00000002708 Pih1d1Q9CQJ2 290 aa16.78■□□□□ 0.28
Shh-201ENSMUST00000002708 Wars2Q9CYK1 360 aa16.78■□□□□ 0.28
Shh-201ENSMUST00000002708 Spata1Q9D5R4 444 aa16.78■□□□□ 0.28
Shh-201ENSMUST00000002708 Ern2Q9Z2E3 911 aa16.78■□□□□ 0.28
Shh-201ENSMUST00000002708 2610028H24RikG5E8K1 270 aa16.78■□□□□ 0.28
Shh-201ENSMUST00000002708 Zfp850J3QPC5 689 aa16.78■□□□□ 0.28
Shh-201ENSMUST00000002708 AmacrO09174 381 aa16.78■□□□□ 0.28
Shh-201ENSMUST00000002708 Asgr1P34927 284 aa16.78■□□□□ 0.28
Shh-201ENSMUST00000002708 ZbbxQ0P5X5 716 aa16.78■□□□□ 0.28
Shh-201ENSMUST00000002708 Ankrd45Q810N6 248 aa16.78■□□□□ 0.28
Shh-201ENSMUST00000002708 Fam163bQ8BUM6 167 aa16.78■□□□□ 0.28
Shh-201ENSMUST00000002708 Sgsm3Q8VCZ6 750 aa16.78■□□□□ 0.28
Retrieved 100 of 22,080 RNA–protein pairs in 53.4 ms