RNA–Protein interactions for RNA: ENST00000641587.1

PHGDH-222, Transcript of phosphoglycerate dehydrogenase, human

Gene PHGDH, Length 566 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PHGDH-222	ENST00000641587	RALA	P11233	206 aa		10.44	□□□□□ -0.74
PHGDH-222	ENST00000641587	SLC9A1	P19634	815 aa		10.44	□□□□□ -0.74
PHGDH-222	ENST00000641587	PON1	P27169	355 aa		10.44	□□□□□ -0.74
PHGDH-222	ENST00000641587	HOXD9	P28356	352 aa	Predicted RBP	10.44	□□□□□ -0.74
PHGDH-222	ENST00000641587	OXTR	P30559	389 aa		10.44	□□□□□ -0.74
PHGDH-222	ENST00000641587	CHKA	P35790	457 aa		10.44	□□□□□ -0.74
PHGDH-222	ENST00000641587	PBX1	P40424	430 aa		10.44	□□□□□ -0.74
PHGDH-222	ENST00000641587	TRIM14	Q14142	442 aa		10.44	□□□□□ -0.74
PHGDH-222	ENST00000641587	PTPRN	Q16849	979 aa		10.44	□□□□□ -0.74
PHGDH-222	ENST00000641587	TRIM65	Q6PJ69	517 aa		10.44	□□□□□ -0.74
PHGDH-222	ENST00000641587	IL27RA	Q6UWB1	636 aa		10.44	□□□□□ -0.74
PHGDH-222	ENST00000641587	DDI1	Q8WTU0	396 aa		10.44	□□□□□ -0.74
PHGDH-222	ENST00000641587	CPLX3	Q8WVH0	158 aa		10.44	□□□□□ -0.74
PHGDH-222	ENST00000641587	BIRC7	Q96CA5	298 aa		10.44	□□□□□ -0.74
PHGDH-222	ENST00000641587	NT5C1B	Q96P26	610 aa		10.44	□□□□□ -0.74
PHGDH-222	ENST00000641587	DCBLD2	Q96PD2	775 aa		10.44	□□□□□ -0.74
PHGDH-222	ENST00000641587	CDC6	Q99741	560 aa		10.44	□□□□□ -0.74
PHGDH-222	ENST00000641587	ARID3A	Q99856	593 aa		10.44	□□□□□ -0.74
PHGDH-222	ENST00000641587	MTG2	Q9H4K7	406 aa		10.44	□□□□□ -0.74
PHGDH-222	ENST00000641587	PNPLA8	Q9NP80	782 aa		10.44	□□□□□ -0.74
PHGDH-222	ENST00000641587	CLIC5	Q9NZA1	410 aa		10.44	□□□□□ -0.74
PHGDH-222	ENST00000641587	MARCH2	Q9P0N8	246 aa		10.44	□□□□□ -0.74
PHGDH-222	ENST00000641587	ANKRD6	Q9Y2G4	727 aa		10.44	□□□□□ -0.74
PHGDH-222	ENST00000641587	ZBTB32	Q9Y2Y4	487 aa	Predicted RBP	10.44	□□□□□ -0.74
PHGDH-222	ENST00000641587	PCDHGB2	Q9Y5G2	931 aa		10.44	□□□□□ -0.74
PHGDH-222	ENST00000641587	SHROOM3	Q8TF72	1996 aa		10.44	□□□□□ -0.74
PHGDH-222	ENST00000641587	TULP2	O00295	520 aa		10.43	□□□□□ -0.74
PHGDH-222	ENST00000641587	NPC1	O15118	1278 aa		10.43	□□□□□ -0.74
PHGDH-222	ENST00000641587	PMM2	O15305	246 aa		10.43	□□□□□ -0.74
PHGDH-222	ENST00000641587	FSBP	O95073	299 aa		10.43	□□□□□ -0.74
PHGDH-222	ENST00000641587	HLA-F	P30511	346 aa		10.43	□□□□□ -0.74
PHGDH-222	ENST00000641587	SGSH	P51688	502 aa		10.43	□□□□□ -0.74
PHGDH-222	ENST00000641587	AFF3	P51826	1226 aa	Known RBP	10.43	□□□□□ -0.74
PHGDH-222	ENST00000641587	ZNF132	P52740	706 aa		10.43	□□□□□ -0.74
PHGDH-222	ENST00000641587	MCCD1	P59942	119 aa	Predicted RBP	10.43	□□□□□ -0.74
PHGDH-222	ENST00000641587	POLR2F	P61218	127 aa	Known RBP	10.43	□□□□□ -0.74
PHGDH-222	ENST00000641587	COG7	P83436	770 aa		10.43	□□□□□ -0.74
PHGDH-222	ENST00000641587	APBA1	Q02410	837 aa		10.43	□□□□□ -0.74
PHGDH-222	ENST00000641587	ARID5A	Q03989	594 aa		10.43	□□□□□ -0.74
PHGDH-222	ENST00000641587	KCNMA1	Q12791	1236 aa		10.43	□□□□□ -0.74
PHGDH-222	ENST00000641587	CAMK2G	Q13555	558 aa	Predicted RBP	10.43	□□□□□ -0.74
PHGDH-222	ENST00000641587	EIF4H	Q15056	248 aa	Known RBP	10.43	□□□□□ -0.74
PHGDH-222	ENST00000641587	FNDC3B	Q53EP0	1204 aa	Known RBP	10.43	□□□□□ -0.74
PHGDH-222	ENST00000641587	PRAMEF14	Q5SWL7	426 aa		10.43	□□□□□ -0.74
PHGDH-222	ENST00000641587	BHLHA9	Q7RTU4	235 aa		10.43	□□□□□ -0.74
PHGDH-222	ENST00000641587	TADA2B	Q86TJ2	420 aa		10.43	□□□□□ -0.74
PHGDH-222	ENST00000641587	EHBP1	Q8NDI1	1231 aa		10.43	□□□□□ -0.74
PHGDH-222	ENST00000641587	OR2T3	Q8NH03	318 aa		10.43	□□□□□ -0.74
PHGDH-222	ENST00000641587	PIP4K2C	Q8TBX8	421 aa		10.43	□□□□□ -0.74
PHGDH-222	ENST00000641587	ADAM32	Q8TC27	787 aa		10.43	□□□□□ -0.74
PHGDH-222	ENST00000641587	WFDC5	Q8TCV5	224 aa		10.43	□□□□□ -0.74
PHGDH-222	ENST00000641587	TAF4B	Q92750	862 aa		10.43	□□□□□ -0.74
PHGDH-222	ENST00000641587	SEMA4D	Q92854	862 aa		10.43	□□□□□ -0.74
PHGDH-222	ENST00000641587	IQCD	Q96DY2	449 aa		10.43	□□□□□ -0.74
PHGDH-222	ENST00000641587	ORAI3	Q9BRQ5	295 aa		10.43	□□□□□ -0.74
PHGDH-222	ENST00000641587	DUSP16	Q9BY84	665 aa		10.43	□□□□□ -0.74
PHGDH-222	ENST00000641587	NIF3L1	Q9GZT8	377 aa		10.43	□□□□□ -0.74
PHGDH-222	ENST00000641587	NLRC4	Q9NPP4	1024 aa		10.43	□□□□□ -0.74
PHGDH-222	ENST00000641587	RAB20	Q9NX57	234 aa		10.43	□□□□□ -0.74
PHGDH-222	ENST00000641587	IMPACT	Q9P2X3	320 aa		10.43	□□□□□ -0.74
PHGDH-222	ENST00000641587	DKK4	Q9UBT3	224 aa		10.43	□□□□□ -0.74
PHGDH-222	ENST00000641587	ZNF510	Q9Y2H8	683 aa		10.43	□□□□□ -0.74
PHGDH-222	ENST00000641587	KNTC1	P50748	2209 aa		10.42	□□□□□ -0.74
PHGDH-222	ENST00000641587		A0A087WV48	116 aa		10.42	□□□□□ -0.74
PHGDH-222	ENST00000641587	EIF4E1B	A6NMX2	242 aa	Known RBP	10.42	□□□□□ -0.74
PHGDH-222	ENST00000641587	PLK4	O00444	970 aa		10.42	□□□□□ -0.74
PHGDH-222	ENST00000641587	TNFSF14	O43557	240 aa		10.42	□□□□□ -0.74
PHGDH-222	ENST00000641587	SEMA4F	O95754	770 aa		10.42	□□□□□ -0.74
PHGDH-222	ENST00000641587	CYBB	P04839	570 aa		10.42	□□□□□ -0.74
PHGDH-222	ENST00000641587	ITPKB	P27987	946 aa		10.42	□□□□□ -0.74
PHGDH-222	ENST00000641587	DEK	P35659	375 aa	Known RBP	10.42	□□□□□ -0.74
PHGDH-222	ENST00000641587	GRK6	P43250	576 aa		10.42	□□□□□ -0.74
PHGDH-222	ENST00000641587	GRIA4	P48058	902 aa		10.42	□□□□□ -0.74
PHGDH-222	ENST00000641587	PSEN1	P49768	467 aa		10.42	□□□□□ -0.74
PHGDH-222	ENST00000641587	CCT8	P50990	548 aa		10.42	□□□□□ -0.74
PHGDH-222	ENST00000641587	GSDMD	P57764	484 aa		10.42	□□□□□ -0.74
PHGDH-222	ENST00000641587	YWHAG	P61981	247 aa	Known RBP eCLIP	10.42	□□□□□ -0.74
PHGDH-222	ENST00000641587	RPS14	P62263	151 aa	Known RBP	10.42	□□□□□ -0.74
PHGDH-222	ENST00000641587	RAPGEF1	Q13905	1077 aa		10.42	□□□□□ -0.74
PHGDH-222	ENST00000641587	SMAD1	Q15797	465 aa	Known RBP	10.42	□□□□□ -0.74
PHGDH-222	ENST00000641587	GJB7	Q6PEY0	223 aa		10.42	□□□□□ -0.74
PHGDH-222	ENST00000641587	CHST9	Q7L1S5	443 aa		10.42	□□□□□ -0.74
PHGDH-222	ENST00000641587	RSRC2	Q7L4I2	434 aa	Known RBP	10.42	□□□□□ -0.74
PHGDH-222	ENST00000641587	PIGZ	Q86VD9	579 aa		10.42	□□□□□ -0.74
PHGDH-222	ENST00000641587	GATAD2A	Q86YP4	633 aa		10.42	□□□□□ -0.74
PHGDH-222	ENST00000641587	FAM217A	Q8IXS0	508 aa		10.42	□□□□□ -0.74
PHGDH-222	ENST00000641587	PPM1K	Q8N3J5	372 aa		10.42	□□□□□ -0.74
PHGDH-222	ENST00000641587	GALNT15	Q8N3T1	639 aa		10.42	□□□□□ -0.74
PHGDH-222	ENST00000641587	CPXM2	Q8N436	756 aa		10.42	□□□□□ -0.74
PHGDH-222	ENST00000641587	ZNF276	Q8N554	614 aa		10.42	□□□□□ -0.74
PHGDH-222	ENST00000641587	ZNF397	Q8NF99	534 aa	Predicted RBP	10.42	□□□□□ -0.74
PHGDH-222	ENST00000641587	PDLIM2	Q96JY6	352 aa		10.42	□□□□□ -0.74
PHGDH-222	ENST00000641587	SPAG5	Q96R06	1193 aa		10.42	□□□□□ -0.74
PHGDH-222	ENST00000641587	ULBP1	Q9BZM6	244 aa		10.42	□□□□□ -0.74
PHGDH-222	ENST00000641587	DCLK3	Q9C098	648 aa		10.42	□□□□□ -0.74
PHGDH-222	ENST00000641587	GAN	Q9H2C0	597 aa		10.42	□□□□□ -0.74
PHGDH-222	ENST00000641587	TMEM245	Q9H330	911 aa		10.42	□□□□□ -0.74
PHGDH-222	ENST00000641587	CYP3A43	Q9HB55	503 aa		10.42	□□□□□ -0.74
PHGDH-222	ENST00000641587	PLCB1	Q9NQ66	1216 aa		10.42	□□□□□ -0.74
PHGDH-222	ENST00000641587	ABCB8	Q9NUT2	735 aa		10.42	□□□□□ -0.74

Retrieved 100 of 20,778 RNA–protein pairs in 57 ms