RNA–Protein interactions for RNA: ENST00000640615.1

HLA-B-258, Transcript of major histocompatibility complex, class I, B, humanhuman

BASIC

Gene HLA-B, Length 240 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-B-258ENST00000640615 PRDM16Q9HAZ2 1276 aa9.04□□□□□ -0.96
HLA-B-258ENST00000640615 ETNK2Q9NVF9 386 aa9.04□□□□□ -0.96
HLA-B-258ENST00000640615 MPP6Q9NZW5 540 aa9.04□□□□□ -0.96
HLA-B-258ENST00000640615 SAE1Q9UBE0 346 aaPredicted RBP9.04□□□□□ -0.96
HLA-B-258ENST00000640615 NR2E1Q9Y466 385 aa9.04□□□□□ -0.96
HLA-B-258ENST00000640615 ZNF638Q14966 1978 aaKnown RBP9.04□□□□□ -0.96
HLA-B-258ENST00000640615 PRRC2BQ5JSZ5 2229 aaKnown RBP9.03□□□□□ -0.96
HLA-B-258ENST00000640615 DRGXA6NNA5 263 aa9.03□□□□□ -0.96
HLA-B-258ENST00000640615 APOC4-APOC2K7ER74 178 aa9.03□□□□□ -0.96
HLA-B-258ENST00000640615 DCLK1O15075 740 aa9.03□□□□□ -0.96
HLA-B-258ENST00000640615 FGF10O15520 208 aaPredicted RBP9.03□□□□□ -0.96
HLA-B-258ENST00000640615 SLU7O95391 586 aaKnown RBP9.03□□□□□ -0.96
HLA-B-258ENST00000640615 APOC2P02655 101 aa9.03□□□□□ -0.96
HLA-B-258ENST00000640615 PECAM1P16284 738 aaPredicted RBP9.03□□□□□ -0.96
HLA-B-258ENST00000640615 TGM2P21980 687 aa9.03□□□□□ -0.96
HLA-B-258ENST00000640615 KCNA5P22460 613 aa9.03□□□□□ -0.96
HLA-B-258ENST00000640615 WEE1P30291 646 aa9.03□□□□□ -0.96
HLA-B-258ENST00000640615 IRAK1P51617 712 aa9.03□□□□□ -0.96
HLA-B-258ENST00000640615 VCPP55072 806 aaKnown RBP9.03□□□□□ -0.96
HLA-B-258ENST00000640615 SNX1Q13596 522 aa9.03□□□□□ -0.96
HLA-B-258ENST00000640615 SIX1Q15475 284 aaPredicted RBP9.03□□□□□ -0.96
HLA-B-258ENST00000640615 ZNF77Q15935 545 aa9.03□□□□□ -0.96
HLA-B-258ENST00000640615 AAK1Q2M2I8 961 aa9.03□□□□□ -0.96
HLA-B-258ENST00000640615 RABGAP1LQ5R372 815 aa9.03□□□□□ -0.96
HLA-B-258ENST00000640615 NCBP2-AS2Q69YL0 99 aa9.03□□□□□ -0.96
HLA-B-258ENST00000640615 TMCO3Q6UWJ1 677 aa9.03□□□□□ -0.96
HLA-B-258ENST00000640615 NPNTQ6UXI9 565 aa9.03□□□□□ -0.96
HLA-B-258ENST00000640615 ZNF572Q7Z3I7 529 aaPredicted RBP9.03□□□□□ -0.96
HLA-B-258ENST00000640615 TFAP2DQ7Z6R9 452 aa9.03□□□□□ -0.96
HLA-B-258ENST00000640615 KLHL7Q8IXQ5 586 aa9.03□□□□□ -0.96
HLA-B-258ENST00000640615 RTL3Q8N8U3 475 aaKnown RBP9.03□□□□□ -0.96
HLA-B-258ENST00000640615 PRELID2Q8N945 189 aa9.03□□□□□ -0.96
HLA-B-258ENST00000640615 TTC13Q8NBP0 860 aa9.03□□□□□ -0.96
HLA-B-258ENST00000640615 SMRP1Q8NCR6 262 aa9.03□□□□□ -0.96
HLA-B-258ENST00000640615 ST13P5Q8NFI4 369 aaPredicted RBP9.03□□□□□ -0.96
HLA-B-258ENST00000640615 RIN3Q8TB24 985 aa9.03□□□□□ -0.96
HLA-B-258ENST00000640615 ATG4AQ8WYN0 398 aa9.03□□□□□ -0.96
HLA-B-258ENST00000640615 P3H4Q92791 437 aa9.03□□□□□ -0.96
HLA-B-258ENST00000640615 MAGOHBQ96A72 148 aaKnown RBP9.03□□□□□ -0.96
HLA-B-258ENST00000640615 TMA16Q96EY4 203 aaKnown RBP9.03□□□□□ -0.96
HLA-B-258ENST00000640615 MYEOVQ96EZ4 313 aa9.03□□□□□ -0.96
HLA-B-258ENST00000640615 RPGRIP1Q96KN7 1286 aa9.03□□□□□ -0.96
HLA-B-258ENST00000640615 ASB16Q96NS5 453 aa9.03□□□□□ -0.96
HLA-B-258ENST00000640615 NECTIN4Q96NY8 510 aa9.03□□□□□ -0.96
HLA-B-258ENST00000640615 POMKQ9H5K3 350 aa9.03□□□□□ -0.96
HLA-B-258ENST00000640615 UBE2ZQ9H832 354 aaPredicted RBP9.03□□□□□ -0.96
HLA-B-258ENST00000640615 KIF9Q9HAQ2 790 aa9.03□□□□□ -0.96
HLA-B-258ENST00000640615 HOMER3Q9NSC5 361 aa9.03□□□□□ -0.96
HLA-B-258ENST00000640615 RBM12Q9NTZ6 932 aaKnown RBP9.03□□□□□ -0.96
HLA-B-258ENST00000640615 PPARGC1AQ9UBK2 798 aaKnown RBP9.03□□□□□ -0.96
HLA-B-258ENST00000640615 STOML2Q9UJZ1 356 aa9.03□□□□□ -0.96
HLA-B-258ENST00000640615 R3HDM2Q9Y2K5 976 aaKnown RBP9.03□□□□□ -0.96
HLA-B-258ENST00000640615 MFHAS1Q9Y4C4 1052 aa9.03□□□□□ -0.96
HLA-B-258ENST00000640615 USP15Q9Y4E8 981 aaPredicted RBP9.03□□□□□ -0.96
HLA-B-258ENST00000640615 HEY1Q9Y5J3 304 aa9.03□□□□□ -0.96
HLA-B-258ENST00000640615 ZFP37Q9Y6Q3 630 aaPredicted RBP9.03□□□□□ -0.96
HLA-B-258ENST00000640615 TCF20Q9UGU0 1960 aaKnown RBP9.03□□□□□ -0.96
HLA-B-258ENST00000640615 IGLV3-10A0A075B6K4 115 aa9.02□□□□□ -0.97
HLA-B-258ENST00000640615 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP9.02□□□□□ -0.97
HLA-B-258ENST00000640615 TYW5A2RUC4 315 aaKnown RBP9.02□□□□□ -0.97
HLA-B-258ENST00000640615 HEPACAM2A8MVW5 462 aa9.02□□□□□ -0.97
HLA-B-258ENST00000640615 H7C0C1 242 aa9.02□□□□□ -0.97
HLA-B-258ENST00000640615 CCDC188H7C350 402 aa9.02□□□□□ -0.97
HLA-B-258ENST00000640615 SLC9A3R1O14745 358 aaPredicted RBP9.02□□□□□ -0.97
HLA-B-258ENST00000640615 TBL1XO60907 577 aa9.02□□□□□ -0.97
HLA-B-258ENST00000640615 PHF2O75151 1096 aa9.02□□□□□ -0.97
HLA-B-258ENST00000640615 CNTN5O94779 1100 aa9.02□□□□□ -0.97
HLA-B-258ENST00000640615 MAP3K6O95382 1288 aa9.02□□□□□ -0.97
HLA-B-258ENST00000640615 CYBBP04839 570 aa9.02□□□□□ -0.97
HLA-B-258ENST00000640615 TCF3P15923 654 aa9.02□□□□□ -0.97
HLA-B-258ENST00000640615 RHOQP17081 205 aa9.02□□□□□ -0.97
HLA-B-258ENST00000640615 HOXC13P31276 330 aa9.02□□□□□ -0.97
HLA-B-258ENST00000640615 CHKAP35790 457 aa9.02□□□□□ -0.97
HLA-B-258ENST00000640615 ATP5OP48047 213 aa9.02□□□□□ -0.97
HLA-B-258ENST00000640615 NR2C2P49116 596 aa9.02□□□□□ -0.97
HLA-B-258ENST00000640615 EIF3EP60228 445 aaKnown RBP9.02□□□□□ -0.97
HLA-B-258ENST00000640615 RPS24P62847 133 aaKnown RBP9.02□□□□□ -0.97
HLA-B-258ENST00000640615 OTUD4Q01804 1114 aaKnown RBP9.02□□□□□ -0.97
HLA-B-258ENST00000640615 TFF2Q03403 129 aa9.02□□□□□ -0.97
HLA-B-258ENST00000640615 GBE1Q04446 702 aa9.02□□□□□ -0.97
HLA-B-258ENST00000640615 USP4Q13107 963 aa9.02□□□□□ -0.97
HLA-B-258ENST00000640615 PAFAH1B3Q15102 231 aaKnown RBP9.02□□□□□ -0.97
HLA-B-258ENST00000640615 CCNG2Q16589 344 aa9.02□□□□□ -0.97
HLA-B-258ENST00000640615 C5orf22Q49AR2 442 aa9.02□□□□□ -0.97
HLA-B-258ENST00000640615 MPPE1Q53F39 396 aa9.02□□□□□ -0.97
HLA-B-258ENST00000640615 ALFQ53S48 1182 aa9.02□□□□□ -0.97
HLA-B-258ENST00000640615 ARTNQ5T4W7 220 aa9.02□□□□□ -0.97
HLA-B-258ENST00000640615 TANGO2Q6ICL3 276 aa9.02□□□□□ -0.97
HLA-B-258ENST00000640615 TPGS1Q6ZTW0 290 aa9.02□□□□□ -0.97
HLA-B-258ENST00000640615 BZW1Q7L1Q6 419 aaKnown RBP9.02□□□□□ -0.97
HLA-B-258ENST00000640615 CIR1Q86X95 450 aaPredicted RBP9.02□□□□□ -0.97
HLA-B-258ENST00000640615 CPXM2Q8N436 756 aa9.02□□□□□ -0.97
HLA-B-258ENST00000640615 CCDC33Q8N5R6 958 aa9.02□□□□□ -0.97
HLA-B-258ENST00000640615 TDRD5Q8NAT2 981 aaKnown RBP9.02□□□□□ -0.97
HLA-B-258ENST00000640615 NETO2Q8NC67 525 aa9.02□□□□□ -0.97
HLA-B-258ENST00000640615 HJURPQ8NCD3 748 aaPredicted RBP9.02□□□□□ -0.97
HLA-B-258ENST00000640615 LRRN4CLQ8ND94 238 aa9.02□□□□□ -0.97
HLA-B-258ENST00000640615 ACTL9Q8TC94 416 aa9.02□□□□□ -0.97
HLA-B-258ENST00000640615 BPIFB1Q8TDL5 484 aa9.02□□□□□ -0.97
HLA-B-258ENST00000640615 DDI1Q8WTU0 396 aa9.02□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 98.6 ms