RNA–Protein interactions for RNA: ENST00000640499.1

VEGFA-231, Transcript of vascular endothelial growth factor A, human

APPRIS P3 TSL 1 (best) BASIC

Gene VEGFA, Length 1,188 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
VEGFA-231	ENST00000640499	CHP1	Q99653	195 aa		27.58	■■■□□ 2.01
VEGFA-231	ENST00000640499	ABHD10	Q9NUJ1	306 aa		27.58	■■■□□ 2.01
VEGFA-231	ENST00000640499	ELOVL2	Q9NXB9	296 aa		27.58	■■■□□ 2.01
VEGFA-231	ENST00000640499	GGA2	Q9UJY4	613 aa		27.58	■■■□□ 2.01
VEGFA-231	ENST00000640499	TMEM191C	A6NGB0	347 aa		27.57	■■■□□ 2
VEGFA-231	ENST00000640499	WASH3P	C4AMC7	463 aa		27.57	■■■□□ 2
VEGFA-231	ENST00000640499	PABPC1	P11940	636 aa	Known RBP	27.57	■■■□□ 2
VEGFA-231	ENST00000640499	WAS	P42768	502 aa		27.57	■■■□□ 2
VEGFA-231	ENST00000640499	ZNF252P-AS1	Q0IIN9	211 aa		27.57	■■■□□ 2
VEGFA-231	ENST00000640499	MTA1	Q13330	715 aa		27.57	■■■□□ 2
VEGFA-231	ENST00000640499	MFN1	Q8IWA4	741 aa		27.57	■■■□□ 2
VEGFA-231	ENST00000640499	CARNMT1	Q8N4J0	409 aa		27.57	■■■□□ 2
VEGFA-231	ENST00000640499	HAPLN3	Q96S86	360 aa		27.57	■■■□□ 2
VEGFA-231	ENST00000640499	FAM126A	Q9BYI3	521 aa	Predicted RBP	27.57	■■■□□ 2
VEGFA-231	ENST00000640499	PARVA	Q9NVD7	372 aa		27.57	■■■□□ 2
VEGFA-231	ENST00000640499	TMEM51	Q9NW97	253 aa		27.57	■■■□□ 2
VEGFA-231	ENST00000640499	THAP10	Q9P2Z0	257 aa	Predicted RBP	27.57	■■■□□ 2
VEGFA-231	ENST00000640499	CNOT8	Q9UFF9	292 aa	Known RBP	27.57	■■■□□ 2
VEGFA-231	ENST00000640499		A0A1W2PQF6	199 aa		27.56	■■■□□ 2
VEGFA-231	ENST00000640499	CNTN5	O94779	1100 aa		27.56	■■■□□ 2
VEGFA-231	ENST00000640499	ADRA1B	P35368	520 aa		27.56	■■■□□ 2
VEGFA-231	ENST00000640499	ENPP2	Q13822	863 aa		27.56	■■■□□ 2
VEGFA-231	ENST00000640499	FUT11	Q495W5	492 aa		27.56	■■■□□ 2
VEGFA-231	ENST00000640499	HEATR6	Q6AI08	1181 aa	Known RBP	27.56	■■■□□ 2
VEGFA-231	ENST00000640499	CCAR2	Q8N163	923 aa	Known RBP	27.56	■■■□□ 2
VEGFA-231	ENST00000640499	ARFGAP1	Q8N6T3	406 aa		27.56	■■■□□ 2
VEGFA-231	ENST00000640499	CCDC185	Q8N715	623 aa		27.56	■■■□□ 2
VEGFA-231	ENST00000640499	OR52K2	Q8NGK3	314 aa		27.56	■■■□□ 2
VEGFA-231	ENST00000640499	PCDHGA2	Q9Y5H1	932 aa		27.56	■■■□□ 2
VEGFA-231	ENST00000640499	EML5	Q05BV3	1969 aa		27.55	■■■□□ 2
VEGFA-231	ENST00000640499	DRGX	A6NNA5	263 aa		27.55	■■■□□ 2
VEGFA-231	ENST00000640499	PROB1	E7EW31	1015 aa		27.55	■■■□□ 2
VEGFA-231	ENST00000640499	NTSR1	P30989	418 aa		27.55	■■■□□ 2
VEGFA-231	ENST00000640499	PLA2G5	P39877	138 aa		27.55	■■■□□ 2
VEGFA-231	ENST00000640499	MAPK8IP2	Q13387	824 aa	Predicted RBP	27.55	■■■□□ 2
VEGFA-231	ENST00000640499	ALF	Q53S48	1182 aa		27.55	■■■□□ 2
VEGFA-231	ENST00000640499	CXorf57	Q6NSI4	855 aa	Known RBP	27.55	■■■□□ 2
VEGFA-231	ENST00000640499	CHST9	Q7L1S5	443 aa		27.55	■■■□□ 2
VEGFA-231	ENST00000640499	CAMKK1	Q8N5S9	505 aa		27.55	■■■□□ 2
VEGFA-231	ENST00000640499	ZNF653	Q96CK0	615 aa		27.55	■■■□□ 2
VEGFA-231	ENST00000640499	RPRD1A	Q96P16	312 aa	Predicted RBP	27.55	■■■□□ 2
VEGFA-231	ENST00000640499	GABRG3	Q99928	467 aa		27.55	■■■□□ 2
VEGFA-231	ENST00000640499	CNPY3	Q9BT09	278 aa		27.55	■■■□□ 2
VEGFA-231	ENST00000640499	THAP2	Q9H0W7	228 aa		27.55	■■■□□ 2
VEGFA-231	ENST00000640499	CACNA2D2	Q9NY47	1150 aa		27.55	■■■□□ 2
VEGFA-231	ENST00000640499	PAXBP1	Q9Y5B6	917 aa		27.55	■■■□□ 2
VEGFA-231	ENST00000640499	MUC22	E2RYF6	1773 aa	Predicted RBP	27.55	■■■□□ 2
VEGFA-231	ENST00000640499	HR	O43593	1189 aa		27.54	■■■□□ 2
VEGFA-231	ENST00000640499	IL12RB1	P42701	662 aa		27.54	■■■□□ 2
VEGFA-231	ENST00000640499	GFPT1	Q06210	699 aa	Predicted RBP	27.54	■■■□□ 2
VEGFA-231	ENST00000640499	EIF4H	Q15056	248 aa	Known RBP	27.54	■■■□□ 2
VEGFA-231	ENST00000640499	PTPRN	Q16849	979 aa		27.54	■■■□□ 2
VEGFA-231	ENST00000640499	EOGT	Q5NDL2	527 aa		27.54	■■■□□ 2
VEGFA-231	ENST00000640499	KIAA1211L	Q6NV74	962 aa		27.54	■■■□□ 2
VEGFA-231	ENST00000640499	ALKBH5	Q6P6C2	394 aa	Known RBP	27.54	■■■□□ 2
VEGFA-231	ENST00000640499	DCUN1D2	Q6PH85	259 aa		27.54	■■■□□ 2
VEGFA-231	ENST00000640499	TC2N	Q8N9U0	490 aa		27.54	■■■□□ 2
VEGFA-231	ENST00000640499	WFIKKN2	Q8TEU8	576 aa		27.54	■■■□□ 2
VEGFA-231	ENST00000640499	MYO1A	Q9UBC5	1043 aa		27.54	■■■□□ 2
VEGFA-231	ENST00000640499	STON1	Q9Y6Q2	735 aa		27.54	■■■□□ 2
VEGFA-231	ENST00000640499	IGLV3-10	A0A075B6K4	115 aa		27.53	■■■□□ 2
VEGFA-231	ENST00000640499	TIMM44	O43615	452 aa		27.53	■■■□□ 2
VEGFA-231	ENST00000640499	NRL	P54845	237 aa		27.53	■■■□□ 2
VEGFA-231	ENST00000640499	SRSF5	Q13243	272 aa	Known RBP	27.53	■■■□□ 2
VEGFA-231	ENST00000640499	ZNF234	Q14588	700 aa		27.53	■■■□□ 2
VEGFA-231	ENST00000640499	RABGAP1L	Q5R372	815 aa		27.53	■■■□□ 2
VEGFA-231	ENST00000640499	MBLAC2	Q68D91	279 aa		27.53	■■■□□ 2
VEGFA-231	ENST00000640499	VPS36	Q86VN1	386 aa		27.53	■■■□□ 2
VEGFA-231	ENST00000640499	WDR5B	Q86VZ2	330 aa		27.53	■■■□□ 2
VEGFA-231	ENST00000640499	LONP2	Q86WA8	852 aa		27.53	■■■□□ 2
VEGFA-231	ENST00000640499	RASSF3	Q86WH2	238 aa		27.53	■■■□□ 2
VEGFA-231	ENST00000640499	CHPF	Q8IZ52	775 aa		27.53	■■■□□ 2
VEGFA-231	ENST00000640499	APCDD1	Q8J025	514 aa		27.53	■■■□□ 2
VEGFA-231	ENST00000640499	AHI1	Q8N157	1196 aa		27.53	■■■□□ 2
VEGFA-231	ENST00000640499	CYB5D2	Q8WUJ1	264 aa		27.53	■■■□□ 2
VEGFA-231	ENST00000640499	TTC17	Q96AE7	1141 aa		27.53	■■■□□ 2
VEGFA-231	ENST00000640499	ALG14	Q96F25	216 aa		27.53	■■■□□ 2
VEGFA-231	ENST00000640499	MRFAP1L1	Q96HT8	127 aa		27.53	■■■□□ 2
VEGFA-231	ENST00000640499	CIPC	Q9C0C6	399 aa		27.53	■■■□□ 2
VEGFA-231	ENST00000640499	ZNF212	Q9UDV6	495 aa		27.53	■■■□□ 2
VEGFA-231	ENST00000640499	EBF1	Q9UH73	591 aa		27.53	■■■□□ 2
VEGFA-231	ENST00000640499	RAD54B	Q9Y620	910 aa		27.53	■■■□□ 2
VEGFA-231	ENST00000640499	DOCK4	Q8N1I0	1966 aa		27.53	■■■□□ 2
VEGFA-231	ENST00000640499		A0A1B0GVM2	712 aa		27.52	■■■□□ 2
VEGFA-231	ENST00000640499	TYW5	A2RUC4	315 aa	Known RBP	27.52	■■■□□ 2
VEGFA-231	ENST00000640499	TCAF2	A6NFQ2	919 aa		27.52	■■■□□ 2
VEGFA-231	ENST00000640499	AKR1B15	C9JRZ8	316 aa	Predicted RBP	27.52	■■■□□ 2
VEGFA-231	ENST00000640499		E9PAM4	449 aa		27.52	■■■□□ 2
VEGFA-231	ENST00000640499	FAM72C	H0Y354	149 aa		27.52	■■■□□ 2
VEGFA-231	ENST00000640499		H0Y626	953 aa		27.52	■■■□□ 2
VEGFA-231	ENST00000640499	APBB3	O95704	486 aa		27.52	■■■□□ 2
VEGFA-231	ENST00000640499	MYBL1	P10243	752 aa		27.52	■■■□□ 2
VEGFA-231	ENST00000640499	DGKE	P52429	567 aa		27.52	■■■□□ 2
VEGFA-231	ENST00000640499	CDH18	Q13634	790 aa		27.52	■■■□□ 2
VEGFA-231	ENST00000640499	CCDC122	Q5T0U0	273 aa		27.52	■■■□□ 2
VEGFA-231	ENST00000640499	FAM72A	Q5TYM5	149 aa		27.52	■■■□□ 2
VEGFA-231	ENST00000640499	TTC39B	Q5VTQ0	682 aa	Predicted RBP	27.52	■■■□□ 2
VEGFA-231	ENST00000640499	FAM72D	Q6L9T8	149 aa		27.52	■■■□□ 2
VEGFA-231	ENST00000640499	TRMT11	Q7Z4G4	463 aa	Known RBP	27.52	■■■□□ 2
VEGFA-231	ENST00000640499	FAM72B	Q86X60	149 aa		27.52	■■■□□ 2

Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms