RNA–Protein interactions for RNA: ENST00000639290.1

CCDC7-213, Transcript of coiled-coil domain containing 7, humanhuman

TSL 1 (best)

Gene CCDC7, Length 2,542 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-213ENST00000639290 CEBPEQ15744 281 aa3.7□□□□□ -1.82
CCDC7-213ENST00000639290 UBAP2Q5T6F2 1119 aaKnown RBP3.7□□□□□ -1.82
CCDC7-213ENST00000639290 PAMR1Q6UXH9 720 aa3.7□□□□□ -1.82
CCDC7-213ENST00000639290 TRIM46Q7Z4K8 759 aa3.7□□□□□ -1.82
CCDC7-213ENST00000639290 TSEN2Q8NCE0 465 aaKnown RBP3.7□□□□□ -1.82
CCDC7-213ENST00000639290 FBF1Q8TES7 1133 aa3.7□□□□□ -1.82
CCDC7-213ENST00000639290 PTPRN2Q92932 1015 aa3.7□□□□□ -1.82
CCDC7-213ENST00000639290 EAF2Q96CJ1 260 aaPredicted RBP3.7□□□□□ -1.82
CCDC7-213ENST00000639290 OCSTAMPQ9BR26 566 aa3.7□□□□□ -1.82
CCDC7-213ENST00000639290 ZNF559Q9BR84 538 aa3.7□□□□□ -1.82
CCDC7-213ENST00000639290 NEUROD4Q9HD90 331 aa3.7□□□□□ -1.82
CCDC7-213ENST00000639290 SIRPGQ9P1W8 387 aa3.7□□□□□ -1.82
CCDC7-213ENST00000639290 A0A1B0GUA9 196 aa3.69□□□□□ -1.82
CCDC7-213ENST00000639290 FIGNL2A6NMB9 653 aa3.69□□□□□ -1.82
CCDC7-213ENST00000639290 PRC1O43663 620 aa3.69□□□□□ -1.82
CCDC7-213ENST00000639290 TLX2O43763 284 aaPredicted RBP3.69□□□□□ -1.82
CCDC7-213ENST00000639290 PPP1R11O60927 126 aaPredicted RBP3.69□□□□□ -1.82
CCDC7-213ENST00000639290 OLFM2O95897 454 aa3.69□□□□□ -1.82
CCDC7-213ENST00000639290 RAF1P04049 648 aa3.69□□□□□ -1.82
CCDC7-213ENST00000639290 CKMP06732 381 aa3.69□□□□□ -1.82
CCDC7-213ENST00000639290 HMGA1P17096 107 aaKnown RBP3.69□□□□□ -1.82
CCDC7-213ENST00000639290 ACO1P21399 889 aaKnown RBP3.69□□□□□ -1.82
CCDC7-213ENST00000639290 ACSL1P33121 698 aa3.69□□□□□ -1.82
CCDC7-213ENST00000639290 PBX1P40424 430 aa3.69□□□□□ -1.82
CCDC7-213ENST00000639290 EIF1AXP47813 144 aaKnown RBP3.69□□□□□ -1.82
CCDC7-213ENST00000639290 CSNK1G2P78368 415 aa3.69□□□□□ -1.82
CCDC7-213ENST00000639290 ITGB3BPQ13352 177 aaPredicted RBP3.69□□□□□ -1.82
CCDC7-213ENST00000639290 FNDC3BQ53EP0 1204 aaKnown RBP3.69□□□□□ -1.82
CCDC7-213ENST00000639290 IGFL3Q6UXB1 125 aa3.69□□□□□ -1.82
CCDC7-213ENST00000639290 BPHLQ86WA6 291 aaPredicted RBP3.69□□□□□ -1.82
CCDC7-213ENST00000639290 SDR16C5Q8N3Y7 309 aa3.69□□□□□ -1.82
CCDC7-213ENST00000639290 WFDC11Q8NEX6 87 aa3.69□□□□□ -1.82
CCDC7-213ENST00000639290 NACC2Q96BF6 587 aa3.69□□□□□ -1.82
CCDC7-213ENST00000639290 DPYSL5Q9BPU6 564 aa3.69□□□□□ -1.82
CCDC7-213ENST00000639290 SPRY4Q9C004 299 aa3.69□□□□□ -1.82
CCDC7-213ENST00000639290 PUS7LQ9H0K6 701 aaKnown RBP3.69□□□□□ -1.82
CCDC7-213ENST00000639290 NAPBQ9H115 298 aa3.69□□□□□ -1.82
CCDC7-213ENST00000639290 LINC00597Q9H2U6 94 aa3.69□□□□□ -1.82
CCDC7-213ENST00000639290 RIOX1Q9H6W3 641 aa3.69□□□□□ -1.82
CCDC7-213ENST00000639290 AGRPO00253 132 aa3.69□□□□□ -1.82
CCDC7-213ENST00000639290 LEFTY2O00292 366 aa3.69□□□□□ -1.82
CCDC7-213ENST00000639290 DHX16O60231 1041 aaKnown RBP3.69□□□□□ -1.82
CCDC7-213ENST00000639290 RANBP6O60518 1105 aaKnown RBP3.69□□□□□ -1.82
CCDC7-213ENST00000639290 NMT2O60551 498 aa3.69□□□□□ -1.82
CCDC7-213ENST00000639290 HAPLN1P10915 354 aaPredicted RBP3.69□□□□□ -1.82
CCDC7-213ENST00000639290 MARCKSP29966 332 aaPredicted RBP3.69□□□□□ -1.82
CCDC7-213ENST00000639290 SFNP31947 248 aa3.69□□□□□ -1.82
CCDC7-213ENST00000639290 KIR3DL1P43629 444 aa3.69□□□□□ -1.82
CCDC7-213ENST00000639290 AARSP49588 968 aaKnown RBP eCLIP3.69□□□□□ -1.82
CCDC7-213ENST00000639290 WDR4P57081 412 aaKnown RBP3.69□□□□□ -1.82
CCDC7-213ENST00000639290 AMPD3Q01432 767 aa3.69□□□□□ -1.82
CCDC7-213ENST00000639290 YWHAHQ04917 246 aaPredicted RBP3.69□□□□□ -1.82
CCDC7-213ENST00000639290 NR5A1Q13285 461 aa3.69□□□□□ -1.82
CCDC7-213ENST00000639290 OS9Q13438 667 aaPredicted RBP3.69□□□□□ -1.82
CCDC7-213ENST00000639290 SNTB1Q13884 538 aaKnown RBP3.69□□□□□ -1.82
CCDC7-213ENST00000639290 TFDP1Q14186 410 aa3.69□□□□□ -1.82
CCDC7-213ENST00000639290 KCNB1Q14721 858 aa3.69□□□□□ -1.82
CCDC7-213ENST00000639290 AGERQ15109 404 aa3.69□□□□□ -1.82
CCDC7-213ENST00000639290 SYCP1Q15431 976 aa3.69□□□□□ -1.82
CCDC7-213ENST00000639290 XKR4Q5GH76 650 aa3.69□□□□□ -1.82
CCDC7-213ENST00000639290 XKR3Q5GH77 459 aa3.69□□□□□ -1.82
CCDC7-213ENST00000639290 GUSBP11Q6P575 273 aa3.69□□□□□ -1.82
CCDC7-213ENST00000639290 LAYNQ6UX15 382 aa3.69□□□□□ -1.82
CCDC7-213ENST00000639290 TMEM200AQ86VY9 491 aa3.69□□□□□ -1.82
CCDC7-213ENST00000639290 KCNMB4Q86W47 210 aa3.69□□□□□ -1.82
CCDC7-213ENST00000639290 MIB1Q86YT6 1006 aa3.69□□□□□ -1.82
CCDC7-213ENST00000639290 RHPN2Q8IUC4 686 aa3.69□□□□□ -1.82
CCDC7-213ENST00000639290 RBMXL3Q8N7X1 1067 aaKnown RBP3.69□□□□□ -1.82
CCDC7-213ENST00000639290 SSH3Q8TE77 659 aa3.69□□□□□ -1.82
CCDC7-213ENST00000639290 PSPC1Q8WXF1 523 aaKnown RBP3.69□□□□□ -1.82
CCDC7-213ENST00000639290 SHC3Q92529 594 aa3.69□□□□□ -1.82
CCDC7-213ENST00000639290 RMND5BQ96G75 393 aaPredicted RBP3.69□□□□□ -1.82
CCDC7-213ENST00000639290 LCORQ96JN0 433 aaPredicted RBP3.69□□□□□ -1.82
CCDC7-213ENST00000639290 SRPK1Q96SB4 655 aaKnown RBP3.69□□□□□ -1.82
CCDC7-213ENST00000639290 SMAD5Q99717 465 aaKnown RBP3.69□□□□□ -1.82
CCDC7-213ENST00000639290 CCDC3Q9BQI4 270 aa3.69□□□□□ -1.82
CCDC7-213ENST00000639290 NIF3L1Q9GZT8 377 aa3.69□□□□□ -1.82
CCDC7-213ENST00000639290 UTP3Q9NQZ2 479 aaKnown RBP eCLIP3.69□□□□□ -1.82
CCDC7-213ENST00000639290 TLR7Q9NYK1 1049 aaKnown RBP3.69□□□□□ -1.82
CCDC7-213ENST00000639290 TMEM184BQ9Y519 407 aaPredicted RBP3.69□□□□□ -1.82
CCDC7-213ENST00000639290 LOC101059948A0A1B0GTJ6 334 aa3.68□□□□□ -1.82
CCDC7-213ENST00000639290 A6NCN8 305 aa3.68□□□□□ -1.82
CCDC7-213ENST00000639290 ZNF213O14771 459 aa3.68□□□□□ -1.82
CCDC7-213ENST00000639290 TMEM63AO94886 807 aa3.68□□□□□ -1.82
CCDC7-213ENST00000639290 DNTTP04053 509 aa3.68□□□□□ -1.82
CCDC7-213ENST00000639290 PRKAR1AP10644 381 aa3.68□□□□□ -1.82
CCDC7-213ENST00000639290 ATF6P18850 670 aa3.68□□□□□ -1.82
CCDC7-213ENST00000639290 PEX19P40855 299 aa3.68□□□□□ -1.82
CCDC7-213ENST00000639290 BIRC2Q13490 618 aa3.68□□□□□ -1.82
CCDC7-213ENST00000639290 CEP55Q53EZ4 464 aa3.68□□□□□ -1.82
CCDC7-213ENST00000639290 TXNDC8Q6A555 127 aa3.68□□□□□ -1.82
CCDC7-213ENST00000639290 MRPL14Q6P1L8 145 aaKnown RBP3.68□□□□□ -1.82
CCDC7-213ENST00000639290 C16orf46Q6P387 395 aa3.68□□□□□ -1.82
CCDC7-213ENST00000639290 ZNF438Q7Z4V0 828 aa3.68□□□□□ -1.82
CCDC7-213ENST00000639290 FJX1Q86VR8 437 aa3.68□□□□□ -1.82
CCDC7-213ENST00000639290 SFTPA1Q8IWL2 248 aa3.68□□□□□ -1.82
CCDC7-213ENST00000639290 ESX1Q8N693 406 aa3.68□□□□□ -1.82
CCDC7-213ENST00000639290 AMER3Q8N944 861 aa3.68□□□□□ -1.82
CCDC7-213ENST00000639290 CEP120Q8N960 986 aa3.68□□□□□ -1.82
CCDC7-213ENST00000639290 CCDC120Q96HB5 630 aa3.68□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 72.3 ms