RNA–Protein interactions for RNA: ENST00000638536.1

SCN1B-206, Transcript of sodium voltage-gated channel beta subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN1B, Length 1,600 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1B-206ENST00000638536 CFAP54Q96N23 3096 aa22.51■■□□□ 1.19
SCN1B-206ENST00000638536 GON4LQ3T8J9 2241 aa22.5■■□□□ 1.19
SCN1B-206ENST00000638536 GPD1P21695 349 aa22.5■■□□□ 1.19
SCN1B-206ENST00000638536 PLEKHA7Q6IQ23 1121 aa22.5■■□□□ 1.19
SCN1B-206ENST00000638536 SND1Q7KZF4 910 aaKnown RBP eCLIP22.5■■□□□ 1.19
SCN1B-206ENST00000638536 CHST9Q7L1S5 443 aa22.5■■□□□ 1.19
SCN1B-206ENST00000638536 CHPFQ8IZ52 775 aa22.5■■□□□ 1.19
SCN1B-206ENST00000638536 DDX51Q8N8A6 666 aaKnown RBP eCLIP22.5■■□□□ 1.19
SCN1B-206ENST00000638536 FAM172AQ8WUF8 416 aa22.5■■□□□ 1.19
SCN1B-206ENST00000638536 DNAJC7Q99615 494 aa22.5■■□□□ 1.19
SCN1B-206ENST00000638536 CIPCQ9C0C6 399 aa22.5■■□□□ 1.19
SCN1B-206ENST00000638536 BZW2Q9Y6E2 419 aaKnown RBP22.5■■□□□ 1.19
SCN1B-206ENST00000638536 CKAP5Q14008 2032 aa22.5■■□□□ 1.19
SCN1B-206ENST00000638536 MUC22E2RYF6 1773 aaPredicted RBP22.5■■□□□ 1.19
SCN1B-206ENST00000638536 A0A1W2PQF6 199 aa22.49■■□□□ 1.19
SCN1B-206ENST00000638536 CCP110O43303 1012 aa22.49■■□□□ 1.19
SCN1B-206ENST00000638536 HRO43593 1189 aa22.49■■□□□ 1.19
SCN1B-206ENST00000638536 LUC7L3O95232 432 aaKnown RBP22.49■■□□□ 1.19
SCN1B-206ENST00000638536 PABPC1P11940 636 aaKnown RBP22.49■■□□□ 1.19
SCN1B-206ENST00000638536 HOXA6P31267 233 aa22.49■■□□□ 1.19
SCN1B-206ENST00000638536 FUT11Q495W5 492 aa22.49■■□□□ 1.19
SCN1B-206ENST00000638536 KIAA1211LQ6NV74 962 aa22.49■■□□□ 1.19
SCN1B-206ENST00000638536 CCAR2Q8N163 923 aaKnown RBP22.49■■□□□ 1.19
SCN1B-206ENST00000638536 OR52K2Q8NGK3 314 aa22.49■■□□□ 1.19
SCN1B-206ENST00000638536 KCNV2Q8TDN2 545 aa22.49■■□□□ 1.19
SCN1B-206ENST00000638536 CYB5D2Q8WUJ1 264 aa22.49■■□□□ 1.19
SCN1B-206ENST00000638536 ATRIPQ8WXE1 791 aa22.49■■□□□ 1.19
SCN1B-206ENST00000638536 RPRD1AQ96P16 312 aaPredicted RBP22.49■■□□□ 1.19
SCN1B-206ENST00000638536 FAM126AQ9BYI3 521 aaPredicted RBP22.49■■□□□ 1.19
SCN1B-206ENST00000638536 CD248Q9HCU0 757 aa22.49■■□□□ 1.19
SCN1B-206ENST00000638536 PCDHGA2Q9Y5H1 932 aa22.49■■□□□ 1.19
SCN1B-206ENST00000638536 RAD54BQ9Y620 910 aa22.49■■□□□ 1.19
SCN1B-206ENST00000638536 CNTN5O94779 1100 aa22.49■■□□□ 1.19
SCN1B-206ENST00000638536 NTSR1P30989 418 aa22.49■■□□□ 1.19
SCN1B-206ENST00000638536 IL12RB1P42701 662 aa22.49■■□□□ 1.19
SCN1B-206ENST00000638536 TBX2Q13207 712 aaPredicted RBP22.49■■□□□ 1.19
SCN1B-206ENST00000638536 ARID5BQ14865 1188 aa22.49■■□□□ 1.19
SCN1B-206ENST00000638536 EOGTQ5NDL2 527 aa22.49■■□□□ 1.19
SCN1B-206ENST00000638536 STRADAQ7RTN6 431 aa22.49■■□□□ 1.19
SCN1B-206ENST00000638536 TMC6Q7Z403 805 aa22.49■■□□□ 1.19
SCN1B-206ENST00000638536 CAMKK1Q8N5S9 505 aa22.49■■□□□ 1.19
SCN1B-206ENST00000638536 CCDC185Q8N715 623 aa22.49■■□□□ 1.19
SCN1B-206ENST00000638536 THAP10Q9P2Z0 257 aaPredicted RBP22.49■■□□□ 1.19
SCN1B-206ENST00000638536 CNOT8Q9UFF9 292 aaKnown RBP22.49■■□□□ 1.19
SCN1B-206ENST00000638536 TYW5A2RUC4 315 aaKnown RBP22.48■■□□□ 1.19
SCN1B-206ENST00000638536 PROB1E7EW31 1015 aa22.48■■□□□ 1.19
SCN1B-206ENST00000638536 H0Y626 953 aa22.48■■□□□ 1.19
SCN1B-206ENST00000638536 EIF4A3P38919 411 aaKnown RBP22.48■■□□□ 1.19
SCN1B-206ENST00000638536 ZNF143P52747 638 aaPredicted RBP22.48■■□□□ 1.19
SCN1B-206ENST00000638536 NRLP54845 237 aa22.48■■□□□ 1.19
SCN1B-206ENST00000638536 ZNF252P-AS1Q0IIN9 211 aa22.48■■□□□ 1.19
SCN1B-206ENST00000638536 TRIM14Q14142 442 aa22.48■■□□□ 1.19
SCN1B-206ENST00000638536 ZNF234Q14588 700 aa22.48■■□□□ 1.19
SCN1B-206ENST00000638536 C5orf22Q49AR2 442 aa22.48■■□□□ 1.19
SCN1B-206ENST00000638536 HSF5Q4G112 596 aaPredicted RBP22.48■■□□□ 1.19
SCN1B-206ENST00000638536 ALFQ53S48 1182 aa22.48■■□□□ 1.19
SCN1B-206ENST00000638536 MBLAC2Q68D91 279 aa22.48■■□□□ 1.19
SCN1B-206ENST00000638536 ANO7Q6IWH7 933 aa22.48■■□□□ 1.19
SCN1B-206ENST00000638536 DCUN1D2Q6PH85 259 aa22.48■■□□□ 1.19
SCN1B-206ENST00000638536 ASCL5Q7RTU5 278 aa22.48■■□□□ 1.19
SCN1B-206ENST00000638536 LONP2Q86WA8 852 aa22.48■■□□□ 1.19
SCN1B-206ENST00000638536 MDGA1Q8NFP4 955 aa22.48■■□□□ 1.19
SCN1B-206ENST00000638536 TSTD1Q8NFU3 115 aa22.48■■□□□ 1.19
SCN1B-206ENST00000638536 OR8K1Q8NGG5 319 aa22.48■■□□□ 1.19
SCN1B-206ENST00000638536 ZNF653Q96CK0 615 aa22.48■■□□□ 1.19
SCN1B-206ENST00000638536 CHP1Q99653 195 aa22.48■■□□□ 1.19
SCN1B-206ENST00000638536 NENFQ9UMX5 172 aa22.48■■□□□ 1.19
SCN1B-206ENST00000638536 STON1Q9Y6Q2 735 aa22.48■■□□□ 1.19
SCN1B-206ENST00000638536 MFAP3LO75121 409 aa22.47■■□□□ 1.19
SCN1B-206ENST00000638536 HOXB2P14652 356 aa22.47■■□□□ 1.19
SCN1B-206ENST00000638536 ADRA1BP35368 520 aa22.47■■□□□ 1.19
SCN1B-206ENST00000638536 CDH18Q13634 790 aa22.47■■□□□ 1.19
SCN1B-206ENST00000638536 PTPRNQ16849 979 aa22.47■■□□□ 1.19
SCN1B-206ENST00000638536 CXorf57Q6NSI4 855 aaKnown RBP22.47■■□□□ 1.19
SCN1B-206ENST00000638536 WDR5BQ86VZ2 330 aa22.47■■□□□ 1.19
SCN1B-206ENST00000638536 APCDD1Q8J025 514 aa22.47■■□□□ 1.19
SCN1B-206ENST00000638536 GABRG3Q99928 467 aa22.47■■□□□ 1.19
SCN1B-206ENST00000638536 TPSD1Q9BZJ3 242 aa22.47■■□□□ 1.19
SCN1B-206ENST00000638536 ABHD10Q9NUJ1 306 aa22.47■■□□□ 1.19
SCN1B-206ENST00000638536 PARVAQ9NVD7 372 aa22.47■■□□□ 1.19
SCN1B-206ENST00000638536 MPP6Q9NZW5 540 aa22.47■■□□□ 1.19
SCN1B-206ENST00000638536 MYO1AQ9UBC5 1043 aa22.47■■□□□ 1.19
SCN1B-206ENST00000638536 ZNF292O60281 2723 aa22.47■■□□□ 1.19
SCN1B-206ENST00000638536 GVINP1Q7Z2Y8 2422 aa22.47■■□□□ 1.19
SCN1B-206ENST00000638536 FAM72CH0Y354 149 aa22.46■■□□□ 1.19
SCN1B-206ENST00000638536 APBB3O95704 486 aa22.46■■□□□ 1.19
SCN1B-206ENST00000638536 DGKEP52429 567 aa22.46■■□□□ 1.19
SCN1B-206ENST00000638536 GFPT1Q06210 699 aaPredicted RBP22.46■■□□□ 1.19
SCN1B-206ENST00000638536 ENPP2Q13822 863 aa22.46■■□□□ 1.19
SCN1B-206ENST00000638536 RABGAP1LQ5R372 815 aa22.46■■□□□ 1.19
SCN1B-206ENST00000638536 FAM72AQ5TYM5 149 aa22.46■■□□□ 1.19
SCN1B-206ENST00000638536 FAM72DQ6L9T8 149 aa22.46■■□□□ 1.19
SCN1B-206ENST00000638536 RASSF3Q86WH2 238 aa22.46■■□□□ 1.19
SCN1B-206ENST00000638536 FAM72BQ86X60 149 aa22.46■■□□□ 1.19
SCN1B-206ENST00000638536 AHI1Q8N157 1196 aa22.46■■□□□ 1.19
SCN1B-206ENST00000638536 ARFGAP1Q8N6T3 406 aa22.46■■□□□ 1.19
SCN1B-206ENST00000638536 C1orf74Q96LT6 269 aa22.46■■□□□ 1.19
SCN1B-206ENST00000638536 HAPLN3Q96S86 360 aa22.46■■□□□ 1.19
SCN1B-206ENST00000638536 THAP2Q9H0W7 228 aa22.46■■□□□ 1.19
SCN1B-206ENST00000638536 A0A1B0GVM2 712 aa22.46■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms