RNA–Protein interactions for RNA: ENST00000638114.1

CACNA1A-259, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 3

Gene CACNA1A, Length 517 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-259ENST00000638114 IRX4P78413 519 aa17.33■□□□□ 0.36
CACNA1A-259ENST00000638114 TYRO3Q06418 890 aa17.33■□□□□ 0.36
CACNA1A-259ENST00000638114 CAMK2GQ13555 558 aaPredicted RBP17.33■□□□□ 0.36
CACNA1A-259ENST00000638114 SYCP1Q15431 976 aa17.33■□□□□ 0.36
CACNA1A-259ENST00000638114 TRIM61Q5EBN2 209 aa17.33■□□□□ 0.36
CACNA1A-259ENST00000638114 FSCBQ5H9T9 825 aa17.33■□□□□ 0.36
CACNA1A-259ENST00000638114 MMS22LQ6ZRQ5 1243 aa17.33■□□□□ 0.36
CACNA1A-259ENST00000638114 METTL3Q86U44 580 aaKnown RBP17.33■□□□□ 0.36
CACNA1A-259ENST00000638114 ERICH1Q86X53 443 aa17.33■□□□□ 0.36
CACNA1A-259ENST00000638114 MSANTD4Q8NCY6 345 aa17.33■□□□□ 0.36
CACNA1A-259ENST00000638114 OR2T3Q8NH03 318 aa17.33■□□□□ 0.36
CACNA1A-259ENST00000638114 LMLNQ96KR4 655 aa17.33■□□□□ 0.36
CACNA1A-259ENST00000638114 HSPA12BQ96MM6 686 aa17.33■□□□□ 0.36
CACNA1A-259ENST00000638114 SPAG5Q96R06 1193 aa17.33■□□□□ 0.36
CACNA1A-259ENST00000638114 ITM2CQ9NQX7 267 aa17.33■□□□□ 0.36
CACNA1A-259ENST00000638114 TMEM63CQ9P1W3 806 aa17.33■□□□□ 0.36
CACNA1A-259ENST00000638114 USP36Q9P275 1121 aaKnown RBP17.33■□□□□ 0.36
CACNA1A-259ENST00000638114 LIMA1Q9UHB6 759 aaKnown RBP17.33■□□□□ 0.36
CACNA1A-259ENST00000638114 NCOR2Q9Y618 2525 aa17.32■□□□□ 0.36
CACNA1A-259ENST00000638114 LGALS16A8MUM7 142 aa17.32■□□□□ 0.36
CACNA1A-259ENST00000638114 EPHB6O15197 1021 aa17.32■□□□□ 0.36
CACNA1A-259ENST00000638114 MOCS3O95396 460 aa17.32■□□□□ 0.36
CACNA1A-259ENST00000638114 ASLP04424 464 aa17.32■□□□□ 0.36
CACNA1A-259ENST00000638114 CFIP05156 583 aa17.32■□□□□ 0.36
CACNA1A-259ENST00000638114 CSKP41240 450 aa17.32■□□□□ 0.36
CACNA1A-259ENST00000638114 GABRB2P47870 512 aa17.32■□□□□ 0.36
CACNA1A-259ENST00000638114 ST8SIA6P61647 398 aa17.32■□□□□ 0.36
CACNA1A-259ENST00000638114 C2CD6Q53TS8 623 aa17.32■□□□□ 0.36
CACNA1A-259ENST00000638114 RABGAP1LQ5R372 815 aa17.32■□□□□ 0.36
CACNA1A-259ENST00000638114 FAM102AQ5T9C2 384 aaPredicted RBP17.32■□□□□ 0.36
CACNA1A-259ENST00000638114 NAA35Q5VZE5 725 aa17.32■□□□□ 0.36
CACNA1A-259ENST00000638114 CIR1Q86X95 450 aaPredicted RBP17.32■□□□□ 0.36
CACNA1A-259ENST00000638114 SLC41A1Q8IVJ1 513 aa17.32■□□□□ 0.36
CACNA1A-259ENST00000638114 AOPEPQ8N6M6 819 aa17.32■□□□□ 0.36
CACNA1A-259ENST00000638114 SLC20A1Q8WUM9 679 aa17.32■□□□□ 0.36
CACNA1A-259ENST00000638114 TTC17Q96AE7 1141 aa17.32■□□□□ 0.36
CACNA1A-259ENST00000638114 TOE1Q96GM8 510 aaKnown RBP17.32■□□□□ 0.36
CACNA1A-259ENST00000638114 PRMT1Q99873 361 aaKnown RBP17.32■□□□□ 0.36
CACNA1A-259ENST00000638114 NUSAP1Q9BXS6 441 aaKnown RBP17.32■□□□□ 0.36
CACNA1A-259ENST00000638114 RRN3Q9NYV6 651 aa17.32■□□□□ 0.36
CACNA1A-259ENST00000638114 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP17.32■□□□□ 0.36
CACNA1A-259ENST00000638114 KIAA1522Q9P206 1035 aaPredicted RBP17.32■□□□□ 0.36
CACNA1A-259ENST00000638114 EVLQ9UI08 416 aaPredicted RBP17.32■□□□□ 0.36
CACNA1A-259ENST00000638114 PILRBQ9UKJ0 227 aa17.32■□□□□ 0.36
CACNA1A-259ENST00000638114 INTS6Q9UL03 887 aaKnown RBP17.32■□□□□ 0.36
CACNA1A-259ENST00000638114 STAP1Q9ULZ2 295 aa17.32■□□□□ 0.36
CACNA1A-259ENST00000638114 SIK3Q9Y2K2 1263 aa17.32■□□□□ 0.36
CACNA1A-259ENST00000638114 GOLGA8SH3BPF8 625 aa17.31■□□□□ 0.36
CACNA1A-259ENST00000638114 HOXD12P35452 270 aa17.31■□□□□ 0.36
CACNA1A-259ENST00000638114 SOX5P35711 763 aa17.31■□□□□ 0.36
CACNA1A-259ENST00000638114 PI4KAP42356 2102 aa17.31■□□□□ 0.36
CACNA1A-259ENST00000638114 SULT1E1P49888 294 aa17.31■□□□□ 0.36
CACNA1A-259ENST00000638114 TPMTP51580 245 aa17.31■□□□□ 0.36
CACNA1A-259ENST00000638114 NOMO3P69849 1222 aa17.31■□□□□ 0.36
CACNA1A-259ENST00000638114 UBXN1Q04323 297 aa17.31■□□□□ 0.36
CACNA1A-259ENST00000638114 MTA1Q13330 715 aa17.31■□□□□ 0.36
CACNA1A-259ENST00000638114 NCAPHQ15003 741 aa17.31■□□□□ 0.36
CACNA1A-259ENST00000638114 PPM1JQ5JR12 505 aa17.31■□□□□ 0.36
CACNA1A-259ENST00000638114 PITRM1Q5JRX3 1037 aa17.31■□□□□ 0.36
CACNA1A-259ENST00000638114 TTC39BQ5VTQ0 682 aaPredicted RBP17.31■□□□□ 0.36
CACNA1A-259ENST00000638114 OTUD1Q5VV17 481 aaPredicted RBP17.31■□□□□ 0.36
CACNA1A-259ENST00000638114 ZNF677Q86XU0 584 aa17.31■□□□□ 0.36
CACNA1A-259ENST00000638114 XYLT1Q86Y38 959 aa17.31■□□□□ 0.36
CACNA1A-259ENST00000638114 RGL4Q8IZJ4 473 aa17.31■□□□□ 0.36
CACNA1A-259ENST00000638114 CCAR2Q8N163 923 aaKnown RBP17.31■□□□□ 0.36
CACNA1A-259ENST00000638114 NEK11Q8NG66 645 aa17.31■□□□□ 0.36
CACNA1A-259ENST00000638114 CPA5Q8WXQ8 436 aa17.31■□□□□ 0.36
CACNA1A-259ENST00000638114 FOXJ1Q92949 421 aa17.31■□□□□ 0.36
CACNA1A-259ENST00000638114 NPY6RQ99463 290 aa17.31■□□□□ 0.36
CACNA1A-259ENST00000638114 GPR174Q9BXC1 333 aa17.31■□□□□ 0.36
CACNA1A-259ENST00000638114 TMEM9BQ9NQ34 198 aa17.31■□□□□ 0.36
CACNA1A-259ENST00000638114 PRSS16Q9NQE7 514 aa17.31■□□□□ 0.36
CACNA1A-259ENST00000638114 WSB2Q9NYS7 404 aaPredicted RBP17.31■□□□□ 0.36
CACNA1A-259ENST00000638114 SUN2Q9UH99 717 aa17.31■□□□□ 0.36
CACNA1A-259ENST00000638114 NOCTQ9UK39 431 aaKnown RBP17.31■□□□□ 0.36
CACNA1A-259ENST00000638114 DAAM1Q9Y4D1 1078 aa17.31■□□□□ 0.36
CACNA1A-259ENST00000638114 CNOT1A5YKK6 2376 aaKnown RBP17.31■□□□□ 0.36
CACNA1A-259ENST00000638114 A0A1B0GVM2 712 aa17.3■□□□□ 0.36
CACNA1A-259ENST00000638114 TCAF2A6NFQ2 919 aa17.3■□□□□ 0.36
CACNA1A-259ENST00000638114 C4orf47A7E2U8 309 aa17.3■□□□□ 0.36
CACNA1A-259ENST00000638114 ZNF18P17022 549 aa17.3■□□□□ 0.36
CACNA1A-259ENST00000638114 TFE3P19532 575 aaPredicted RBP17.3■□□□□ 0.36
CACNA1A-259ENST00000638114 OXTRP30559 389 aa17.3■□□□□ 0.36
CACNA1A-259ENST00000638114 SCNN1AP37088 669 aa17.3■□□□□ 0.36
CACNA1A-259ENST00000638114 GGCXP38435 758 aa17.3■□□□□ 0.36
CACNA1A-259ENST00000638114 STAT1P42224 750 aa17.3■□□□□ 0.36
CACNA1A-259ENST00000638114 JAM2P57087 298 aa17.3■□□□□ 0.36
CACNA1A-259ENST00000638114 DUOXA1Q1HG43 343 aa17.3■□□□□ 0.36
CACNA1A-259ENST00000638114 SYCP2LQ5T4T6 812 aa17.3■□□□□ 0.36
CACNA1A-259ENST00000638114 PEAR1Q5VY43 1037 aaPredicted RBP17.3■□□□□ 0.36
CACNA1A-259ENST00000638114 FBXL22Q6P050 247 aa17.3■□□□□ 0.36
CACNA1A-259ENST00000638114 SND1Q7KZF4 910 aaKnown RBP eCLIP17.3■□□□□ 0.36
CACNA1A-259ENST00000638114 FAM124AQ86V42 546 aa17.3■□□□□ 0.36
CACNA1A-259ENST00000638114 CEP76Q8TAP6 659 aa17.3■□□□□ 0.36
CACNA1A-259ENST00000638114 ZNF419Q96HQ0 510 aaPredicted RBP17.3■□□□□ 0.36
CACNA1A-259ENST00000638114 RPRD1AQ96P16 312 aaPredicted RBP17.3■□□□□ 0.36
CACNA1A-259ENST00000638114 NAT10Q9H0A0 1025 aaKnown RBP17.3■□□□□ 0.36
CACNA1A-259ENST00000638114 FBRSQ9HAH7 460 aa17.3■□□□□ 0.36
CACNA1A-259ENST00000638114 PIGVQ9NUD9 493 aa17.3■□□□□ 0.36
CACNA1A-259ENST00000638114 VANGL2Q9ULK5 521 aa17.3■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms