RNA–Protein interactions for RNA: ENST00000637325.1

PNKP-228, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 100 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-228ENST00000637325 RABGAP1LQ5R372 815 aa14.28□□□□□ -0.12
PNKP-228ENST00000637325 FAM102AQ5T9C2 384 aaPredicted RBP14.28□□□□□ -0.12
PNKP-228ENST00000637325 NAA35Q5VZE5 725 aa14.28□□□□□ -0.12
PNKP-228ENST00000637325 RNF43Q68DV7 783 aa14.28□□□□□ -0.12
PNKP-228ENST00000637325 TCEAL6Q6IPX3 200 aa14.28□□□□□ -0.12
PNKP-228ENST00000637325 EPS8L1Q8TE68 723 aa14.28□□□□□ -0.12
PNKP-228ENST00000637325 CPA5Q8WXQ8 436 aa14.28□□□□□ -0.12
PNKP-228ENST00000637325 TCEAL3Q969E4 200 aa14.28□□□□□ -0.12
PNKP-228ENST00000637325 MYEOVQ96EZ4 313 aa14.28□□□□□ -0.12
PNKP-228ENST00000637325 SIPA1Q96FS4 1042 aa14.28□□□□□ -0.12
PNKP-228ENST00000637325 KIAA1522Q9P206 1035 aaPredicted RBP14.28□□□□□ -0.12
PNKP-228ENST00000637325 SUN2Q9UH99 717 aa14.28□□□□□ -0.12
PNKP-228ENST00000637325 SIK3Q9Y2K2 1263 aa14.28□□□□□ -0.12
PNKP-228ENST00000637325 KNL1Q8NG31 2342 aa14.27□□□□□ -0.12
PNKP-228ENST00000637325 NYNRINQ9P2P1 1898 aaKnown RBP14.27□□□□□ -0.12
PNKP-228ENST00000637325 MUC22E2RYF6 1773 aaPredicted RBP14.27□□□□□ -0.12
PNKP-228ENST00000637325 DCDC2BA2VCK2 349 aa14.27□□□□□ -0.13
PNKP-228ENST00000637325 EPHB6O15197 1021 aa14.27□□□□□ -0.13
PNKP-228ENST00000637325 ASLP04424 464 aa14.27□□□□□ -0.13
PNKP-228ENST00000637325 ZNF18P17022 549 aa14.27□□□□□ -0.13
PNKP-228ENST00000637325 PTGER3P43115 390 aa14.27□□□□□ -0.13
PNKP-228ENST00000637325 GABRB2P47870 512 aa14.27□□□□□ -0.13
PNKP-228ENST00000637325 SULT1E1P49888 294 aa14.27□□□□□ -0.13
PNKP-228ENST00000637325 JAM2P57087 298 aa14.27□□□□□ -0.13
PNKP-228ENST00000637325 CDR2Q01850 454 aa14.27□□□□□ -0.13
PNKP-228ENST00000637325 EIF4EBP2Q13542 120 aaPredicted RBP14.27□□□□□ -0.13
PNKP-228ENST00000637325 NCAPHQ15003 741 aa14.27□□□□□ -0.13
PNKP-228ENST00000637325 CACUL1Q86Y37 369 aa14.27□□□□□ -0.13
PNKP-228ENST00000637325 XYLT1Q86Y38 959 aa14.27□□□□□ -0.13
PNKP-228ENST00000637325 SYT12Q8IV01 421 aa14.27□□□□□ -0.13
PNKP-228ENST00000637325 ZNF366Q8N895 744 aa14.27□□□□□ -0.13
PNKP-228ENST00000637325 OR2T3Q8NH03 318 aa14.27□□□□□ -0.13
PNKP-228ENST00000637325 SLC20A1Q8WUM9 679 aa14.27□□□□□ -0.13
PNKP-228ENST00000637325 MKRN2Q9H000 416 aaKnown RBP14.27□□□□□ -0.13
PNKP-228ENST00000637325 TMEM245Q9H330 911 aa14.27□□□□□ -0.13
PNKP-228ENST00000637325 WDCPQ9H6R7 721 aa14.27□□□□□ -0.13
PNKP-228ENST00000637325 PAXBP1Q9Y5B6 917 aa14.27□□□□□ -0.13
PNKP-228ENST00000637325 CACNA1AO00555 2505 aa14.27□□□□□ -0.13
PNKP-228ENST00000637325 LAMA1P25391 3075 aa14.26□□□□□ -0.13
PNKP-228ENST00000637325 LRRC10BA6NIK2 292 aa14.26□□□□□ -0.13
PNKP-228ENST00000637325 F9P00740 461 aa14.26□□□□□ -0.13
PNKP-228ENST00000637325 ITPKAP23677 461 aa14.26□□□□□ -0.13
PNKP-228ENST00000637325 CD6P30203 668 aa14.26□□□□□ -0.13
PNKP-228ENST00000637325 OXTRP30559 389 aa14.26□□□□□ -0.13
PNKP-228ENST00000637325 SCNN1AP37088 669 aa14.26□□□□□ -0.13
PNKP-228ENST00000637325 CSKP41240 450 aa14.26□□□□□ -0.13
PNKP-228ENST00000637325 LIMK1P53667 647 aa14.26□□□□□ -0.13
PNKP-228ENST00000637325 NOMO3P69849 1222 aa14.26□□□□□ -0.13
PNKP-228ENST00000637325 DEUP1Q05D60 604 aa14.26□□□□□ -0.13
PNKP-228ENST00000637325 ZNF33AQ06730 810 aa14.26□□□□□ -0.13
PNKP-228ENST00000637325 CAMK2GQ13555 558 aaPredicted RBP14.26□□□□□ -0.13
PNKP-228ENST00000637325 PTPRNQ16849 979 aa14.26□□□□□ -0.13
PNKP-228ENST00000637325 C2CD6Q53TS8 623 aa14.26□□□□□ -0.13
PNKP-228ENST00000637325 FSCBQ5H9T9 825 aa14.26□□□□□ -0.13
PNKP-228ENST00000637325 PITRM1Q5JRX3 1037 aa14.26□□□□□ -0.13
PNKP-228ENST00000637325 STPG1Q5TH74 334 aa14.26□□□□□ -0.13
PNKP-228ENST00000637325 TTC39BQ5VTQ0 682 aaPredicted RBP14.26□□□□□ -0.13
PNKP-228ENST00000637325 RNF219Q5W0B1 726 aaPredicted RBP14.26□□□□□ -0.13
PNKP-228ENST00000637325 TRIM72Q6ZMU5 477 aa14.26□□□□□ -0.13
PNKP-228ENST00000637325 MMS22LQ6ZRQ5 1243 aa14.26□□□□□ -0.13
PNKP-228ENST00000637325 METTL3Q86U44 580 aaKnown RBP14.26□□□□□ -0.13
PNKP-228ENST00000637325 RGL4Q8IZJ4 473 aa14.26□□□□□ -0.13
PNKP-228ENST00000637325 TTC17Q96AE7 1141 aa14.26□□□□□ -0.13
PNKP-228ENST00000637325 LMLNQ96KR4 655 aa14.26□□□□□ -0.13
PNKP-228ENST00000637325 RPRD1AQ96P16 312 aaPredicted RBP14.26□□□□□ -0.13
PNKP-228ENST00000637325 ERGIC2Q96RQ1 377 aa14.26□□□□□ -0.13
PNKP-228ENST00000637325 NPY6RQ99463 290 aa14.26□□□□□ -0.13
PNKP-228ENST00000637325 EDEM2Q9BV94 578 aa14.26□□□□□ -0.13
PNKP-228ENST00000637325 NUSAP1Q9BXS6 441 aaKnown RBP14.26□□□□□ -0.13
PNKP-228ENST00000637325 SIK2Q9H0K1 926 aa14.26□□□□□ -0.13
PNKP-228ENST00000637325 FBRSQ9HAH7 460 aa14.26□□□□□ -0.13
PNKP-228ENST00000637325 CD93Q9NPY3 652 aa14.26□□□□□ -0.13
PNKP-228ENST00000637325 ITM2CQ9NQX7 267 aa14.26□□□□□ -0.13
PNKP-228ENST00000637325 RXFP3Q9NSD7 469 aa14.26□□□□□ -0.13
PNKP-228ENST00000637325 TMEM51Q9NW97 253 aa14.26□□□□□ -0.13
PNKP-228ENST00000637325 NOCTQ9UK39 431 aaKnown RBP14.26□□□□□ -0.13
PNKP-228ENST00000637325 VANGL2Q9ULK5 521 aa14.26□□□□□ -0.13
PNKP-228ENST00000637325 PCNX2A6NKB5 2137 aa14.26□□□□□ -0.13
PNKP-228ENST00000637325 ATXN2Q99700 1313 aaKnown RBP14.25□□□□□ -0.13
PNKP-228ENST00000637325 PATE3B3GLJ2 98 aa14.25□□□□□ -0.13
PNKP-228ENST00000637325 PAGE1O75459 146 aa14.25□□□□□ -0.13
PNKP-228ENST00000637325 ATP1A3P13637 1013 aa14.25□□□□□ -0.13
PNKP-228ENST00000637325 KCNA4P22459 653 aa14.25□□□□□ -0.13
PNKP-228ENST00000637325 COPAP53621 1224 aa14.25□□□□□ -0.13
PNKP-228ENST00000637325 OXCT1P55809 520 aa14.25□□□□□ -0.13
PNKP-228ENST00000637325 FMO1Q01740 532 aa14.25□□□□□ -0.13
PNKP-228ENST00000637325 AUHQ13825 339 aaKnown RBP14.25□□□□□ -0.13
PNKP-228ENST00000637325 SLC25A52Q3SY17 297 aa14.25□□□□□ -0.13
PNKP-228ENST00000637325 FILIP1LQ4L180 1135 aa14.25□□□□□ -0.13
PNKP-228ENST00000637325 TRIM61Q5EBN2 209 aa14.25□□□□□ -0.13
PNKP-228ENST00000637325 BRMS1LQ5PSV4 323 aa14.25□□□□□ -0.13
PNKP-228ENST00000637325 SYCP2LQ5T4T6 812 aa14.25□□□□□ -0.13
PNKP-228ENST00000637325 FBXL22Q6P050 247 aa14.25□□□□□ -0.13
PNKP-228ENST00000637325 CIR1Q86X95 450 aaPredicted RBP14.25□□□□□ -0.13
PNKP-228ENST00000637325 CCAR2Q8N163 923 aaKnown RBP14.25□□□□□ -0.13
PNKP-228ENST00000637325 FOXJ1Q92949 421 aa14.25□□□□□ -0.13
PNKP-228ENST00000637325 TOE1Q96GM8 510 aaKnown RBP14.25□□□□□ -0.13
PNKP-228ENST00000637325 HSPA12BQ96MM6 686 aa14.25□□□□□ -0.13
PNKP-228ENST00000637325 PPP1R9BQ96SB3 815 aa14.25□□□□□ -0.13
PNKP-228ENST00000637325 PRMT1Q99873 361 aaKnown RBP14.25□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms