RNA–Protein interactions for RNA: ENST00000636306.1

CHD2-223, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 5

Gene CHD2, Length 1,755 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-223ENST00000636306 ELMOD1Q8N336 334 aa11.05□□□□□ -0.64
CHD2-223ENST00000636306 GALNT4Q8N4A0 578 aa11.05□□□□□ -0.64
CHD2-223ENST00000636306 SHCBP1Q8NEM2 672 aa11.05□□□□□ -0.64
CHD2-223ENST00000636306 CNDP2Q96KP4 475 aaKnown RBP11.05□□□□□ -0.64
CHD2-223ENST00000636306 SH2D3AQ9BRG2 576 aa11.05□□□□□ -0.64
CHD2-223ENST00000636306 OSBPL11Q9BXB4 747 aa11.05□□□□□ -0.64
CHD2-223ENST00000636306 C2orf40Q9H1Z8 148 aa11.05□□□□□ -0.64
CHD2-223ENST00000636306 FAM96AQ9H5X1 160 aa11.05□□□□□ -0.64
CHD2-223ENST00000636306 RAB20Q9NX57 234 aa11.05□□□□□ -0.64
CHD2-223ENST00000636306 ANKMY1Q9P2S6 941 aa11.05□□□□□ -0.64
CHD2-223ENST00000636306 RIMS3Q9UJD0 308 aa11.05□□□□□ -0.64
CHD2-223ENST00000636306 STYXL1Q9Y6J8 313 aa11.05□□□□□ -0.64
CHD2-223ENST00000636306 LRRIQ4A6NIV6 560 aa11.04□□□□□ -0.64
CHD2-223ENST00000636306 TISP43B9A030 160 aa11.04□□□□□ -0.64
CHD2-223ENST00000636306 K7ERI5 159 aa11.04□□□□□ -0.64
CHD2-223ENST00000636306 FOXN3O00409 490 aaPredicted RBP11.04□□□□□ -0.64
CHD2-223ENST00000636306 NOP56O00567 594 aaKnown RBP11.04□□□□□ -0.64
CHD2-223ENST00000636306 MTRF1O75570 445 aaKnown RBP11.04□□□□□ -0.64
CHD2-223ENST00000636306 MT-ND3P03897 115 aa11.04□□□□□ -0.64
CHD2-223ENST00000636306 KRT6CP48668 564 aa11.04□□□□□ -0.64
CHD2-223ENST00000636306 ERFP50548 548 aa11.04□□□□□ -0.64
CHD2-223ENST00000636306 STAT5BP51692 787 aa11.04□□□□□ -0.64
CHD2-223ENST00000636306 YWHAGP61981 247 aaKnown RBP eCLIP11.04□□□□□ -0.64
CHD2-223ENST00000636306 SLC25A3Q00325 362 aa11.04□□□□□ -0.64
CHD2-223ENST00000636306 CNTN2Q02246 1040 aa11.04□□□□□ -0.64
CHD2-223ENST00000636306 SURF1Q15526 300 aa11.04□□□□□ -0.64
CHD2-223ENST00000636306 WDR45BQ5MNZ6 344 aa11.04□□□□□ -0.64
CHD2-223ENST00000636306 C1orf220Q5T0J3 134 aa11.04□□□□□ -0.64
CHD2-223ENST00000636306 TRMT1LQ7Z2T5 733 aaKnown RBP11.04□□□□□ -0.64
CHD2-223ENST00000636306 TTC30AQ86WT1 665 aa11.04□□□□□ -0.64
CHD2-223ENST00000636306 CRLF3Q8IUI8 442 aa11.04□□□□□ -0.64
CHD2-223ENST00000636306 GSDMBQ8TAX9 411 aa11.04□□□□□ -0.64
CHD2-223ENST00000636306 DLG3Q92796 817 aa11.04□□□□□ -0.64
CHD2-223ENST00000636306 MMP19Q99542 508 aa11.04□□□□□ -0.64
CHD2-223ENST00000636306 TRIM56Q9BRZ2 755 aaKnown RBP11.04□□□□□ -0.64
CHD2-223ENST00000636306 C1orf50Q9BV19 199 aa11.04□□□□□ -0.64
CHD2-223ENST00000636306 KIFC3Q9BVG8 833 aa11.04□□□□□ -0.64
CHD2-223ENST00000636306 RIC8BQ9NVN3 520 aa11.04□□□□□ -0.64
CHD2-223ENST00000636306 AGO2Q9UKV8 859 aaKnown RBP11.04□□□□□ -0.64
CHD2-223ENST00000636306 PRPF19Q9UMS4 504 aaKnown RBP11.04□□□□□ -0.64
CHD2-223ENST00000636306 PCDHGB4Q9UN71 923 aa11.04□□□□□ -0.64
CHD2-223ENST00000636306 PCDHGB5Q9Y5G0 923 aa11.04□□□□□ -0.64
CHD2-223ENST00000636306 IKBKGQ9Y6K9 419 aa11.04□□□□□ -0.64
CHD2-223ENST00000636306 IQANK1A0A1B0GTG1 560 aa11.03□□□□□ -0.64
CHD2-223ENST00000636306 C2orf71A6NGG8 1288 aa11.03□□□□□ -0.64
CHD2-223ENST00000636306 ASB14A6NK59 587 aa11.03□□□□□ -0.64
CHD2-223ENST00000636306 M0QX08 132 aa11.03□□□□□ -0.64
CHD2-223ENST00000636306 KRT6AP02538 564 aa11.03□□□□□ -0.64
CHD2-223ENST00000636306 KRT6BP04259 564 aa11.03□□□□□ -0.64
CHD2-223ENST00000636306 UBL4AP11441 157 aa11.03□□□□□ -0.64
CHD2-223ENST00000636306 DCKP27707 260 aa11.03□□□□□ -0.64
CHD2-223ENST00000636306 ARL2P36404 184 aa11.03□□□□□ -0.64
CHD2-223ENST00000636306 EPHB1P54762 984 aa11.03□□□□□ -0.64
CHD2-223ENST00000636306 CCNA1P78396 465 aa11.03□□□□□ -0.64
CHD2-223ENST00000636306 TRPC3Q13507 836 aa11.03□□□□□ -0.64
CHD2-223ENST00000636306 MXD4Q14582 209 aaPredicted RBP11.03□□□□□ -0.64
CHD2-223ENST00000636306 ARHGEF6Q15052 776 aa11.03□□□□□ -0.64
CHD2-223ENST00000636306 DGKDQ16760 1214 aa11.03□□□□□ -0.64
CHD2-223ENST00000636306 MDH1BQ5I0G3 518 aa11.03□□□□□ -0.64
CHD2-223ENST00000636306 C6orf52Q5T4I8 152 aa11.03□□□□□ -0.64
CHD2-223ENST00000636306 IER5Q5VY09 327 aa11.03□□□□□ -0.64
CHD2-223ENST00000636306 ZPBP2Q6X784 338 aa11.03□□□□□ -0.64
CHD2-223ENST00000636306 HEATR4Q86WZ0 1026 aa11.03□□□□□ -0.64
CHD2-223ENST00000636306 CARM1Q86X55 608 aa11.03□□□□□ -0.64
CHD2-223ENST00000636306 PDZD8Q8NEN9 1154 aa11.03□□□□□ -0.64
CHD2-223ENST00000636306 ZNF564Q8TBZ8 553 aaPredicted RBP11.03□□□□□ -0.64
CHD2-223ENST00000636306 EPS8L1Q8TE68 723 aa11.03□□□□□ -0.64
CHD2-223ENST00000636306 APBB2Q92870 758 aa11.03□□□□□ -0.64
CHD2-223ENST00000636306 CMTM5Q96DZ9 223 aa11.03□□□□□ -0.64
CHD2-223ENST00000636306 RMND5BQ96G75 393 aaPredicted RBP11.03□□□□□ -0.64
CHD2-223ENST00000636306 SERPINI1Q99574 410 aa11.03□□□□□ -0.64
CHD2-223ENST00000636306 FAM213AQ9BRX8 229 aa11.03□□□□□ -0.64
CHD2-223ENST00000636306 ACSS3Q9H6R3 686 aa11.03□□□□□ -0.64
CHD2-223ENST00000636306 GTF3C4Q9UKN8 822 aa11.03□□□□□ -0.64
CHD2-223ENST00000636306 RNF11Q9Y3C5 154 aa11.03□□□□□ -0.64
CHD2-223ENST00000636306 SOWAHBA6NEL2 793 aa11.03□□□□□ -0.64
CHD2-223ENST00000636306 S100BP04271 92 aaPredicted RBP11.03□□□□□ -0.64
CHD2-223ENST00000636306 MSL3P1P0C860 447 aa11.03□□□□□ -0.64
CHD2-223ENST00000636306 TCEA1P23193 301 aaKnown RBP11.03□□□□□ -0.64
CHD2-223ENST00000636306 TBXAS1P24557 533 aaPredicted RBP11.03□□□□□ -0.64
CHD2-223ENST00000636306 BMXP51813 675 aa11.03□□□□□ -0.64
CHD2-223ENST00000636306 ALDH18A1P54886 795 aaKnown RBP11.03□□□□□ -0.64
CHD2-223ENST00000636306 CLDN10P78369 228 aa11.03□□□□□ -0.64
CHD2-223ENST00000636306 CDKL1Q00532 357 aa11.03□□□□□ -0.64
CHD2-223ENST00000636306 GRM1Q13255 1194 aa11.03□□□□□ -0.64
CHD2-223ENST00000636306 TFDP1Q14186 410 aa11.03□□□□□ -0.64
CHD2-223ENST00000636306 CYP2A13Q16696 494 aa11.03□□□□□ -0.64
CHD2-223ENST00000636306 C9orf131Q5VYM1 1079 aa11.03□□□□□ -0.64
CHD2-223ENST00000636306 SLC39A4Q6P5W5 647 aa11.03□□□□□ -0.64
CHD2-223ENST00000636306 PLPPR4Q7Z2D5 763 aa11.03□□□□□ -0.64
CHD2-223ENST00000636306 ESX1Q8N693 406 aa11.03□□□□□ -0.64
CHD2-223ENST00000636306 RNF169Q8NCN4 708 aa11.03□□□□□ -0.64
CHD2-223ENST00000636306 KLHL25Q9H0H3 589 aa11.03□□□□□ -0.64
CHD2-223ENST00000636306 CDH19Q9H159 772 aa11.03□□□□□ -0.64
CHD2-223ENST00000636306 RPF2Q9H7B2 306 aaKnown RBP11.03□□□□□ -0.64
CHD2-223ENST00000636306 EBF1Q9UH73 591 aa11.03□□□□□ -0.64
CHD2-223ENST00000636306 VPS28Q9UK41 221 aa11.03□□□□□ -0.64
CHD2-223ENST00000636306 FBXO9Q9UK97 447 aaPredicted RBP11.03□□□□□ -0.64
CHD2-223ENST00000636306 SHOC2Q9UQ13 582 aa11.03□□□□□ -0.64
CHD2-223ENST00000636306 ZSWIM8A7E2V4 1837 aa11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms