RNA–Protein interactions for RNA: ENST00000630962.1

SRP54-214, Transcript of signal recognition particle 54, humanhuman

TSL 5 BASIC

Gene SRP54, Length 162 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-214ENST00000630962 FAM71BQ8TC56 605 aa3.73□□□□□ -1.81
SRP54-214ENST00000630962 WIPF2Q8TF74 440 aaPredicted RBP3.73□□□□□ -1.81
SRP54-214ENST00000630962 GPR78Q96P69 363 aa3.73□□□□□ -1.81
SRP54-214ENST00000630962 PIMREGQ9BSJ6 248 aa3.73□□□□□ -1.81
SRP54-214ENST00000630962 TMEM120AQ9BXJ8 343 aa3.73□□□□□ -1.81
SRP54-214ENST00000630962 AS3MTQ9HBK9 375 aa3.73□□□□□ -1.81
SRP54-214ENST00000630962 THSD1Q9NS62 852 aa3.73□□□□□ -1.81
SRP54-214ENST00000630962 LIN7CQ9NUP9 197 aaKnown RBP3.73□□□□□ -1.81
SRP54-214ENST00000630962 ANAPC4Q9UJX5 808 aa3.73□□□□□ -1.81
SRP54-214ENST00000630962 PCDHA12Q9UN75 941 aa3.73□□□□□ -1.81
SRP54-214ENST00000630962 LOC105369274A0A096LPK9 316 aa3.72□□□□□ -1.81
SRP54-214ENST00000630962 LOC102723532A0A0G2JNH3 316 aa3.72□□□□□ -1.81
SRP54-214ENST00000630962 TMEM247A6NEH6 219 aa3.72□□□□□ -1.81
SRP54-214ENST00000630962 ZNF814B7Z6K7 855 aa3.72□□□□□ -1.81
SRP54-214ENST00000630962 TRIM38O00635 465 aa3.72□□□□□ -1.81
SRP54-214ENST00000630962 PIP5K1BO14986 540 aa3.72□□□□□ -1.81
SRP54-214ENST00000630962 NFATC1O95644 943 aa3.72□□□□□ -1.81
SRP54-214ENST00000630962 KLKB1P03952 638 aa3.72□□□□□ -1.81
SRP54-214ENST00000630962 SETSIPP0DME0 302 aa3.72□□□□□ -1.81
SRP54-214ENST00000630962 ABCB4P21439 1286 aa3.72□□□□□ -1.81
SRP54-214ENST00000630962 TKTP29401 623 aaKnown RBP3.72□□□□□ -1.81
SRP54-214ENST00000630962 CIITAP33076 1130 aa3.72□□□□□ -1.81
SRP54-214ENST00000630962 PRTGQ2VWP7 1150 aa3.72□□□□□ -1.81
SRP54-214ENST00000630962 TRIM60Q495X7 471 aa3.72□□□□□ -1.81
SRP54-214ENST00000630962 PIK3CD-AS1Q5SR53 167 aa3.72□□□□□ -1.81
SRP54-214ENST00000630962 C6orf10Q5SRN2 563 aa3.72□□□□□ -1.81
SRP54-214ENST00000630962 C16orf89Q6UX73 402 aa3.72□□□□□ -1.81
SRP54-214ENST00000630962 RFX8Q6ZV50 586 aa3.72□□□□□ -1.81
SRP54-214ENST00000630962 IGFN1Q86VF2 1251 aa3.72□□□□□ -1.81
SRP54-214ENST00000630962 DDIASQ8IXT1 998 aa3.72□□□□□ -1.81
SRP54-214ENST00000630962 OR4N4Q8N0Y3 316 aa3.72□□□□□ -1.81
SRP54-214ENST00000630962 ENDOVQ8N8Q3 282 aaKnown RBP3.72□□□□□ -1.81
SRP54-214ENST00000630962 ARL14EPQ8N8R7 260 aaPredicted RBP3.72□□□□□ -1.81
SRP54-214ENST00000630962 ZNF527Q8NB42 609 aa3.72□□□□□ -1.81
SRP54-214ENST00000630962 ZNF548Q8NEK5 533 aaPredicted RBP3.72□□□□□ -1.81
SRP54-214ENST00000630962 SLC25A28Q96A46 364 aa3.72□□□□□ -1.81
SRP54-214ENST00000630962 NPAS1Q99742 590 aa3.72□□□□□ -1.81
SRP54-214ENST00000630962 FSCN3Q9NQT6 498 aa3.72□□□□□ -1.81
SRP54-214ENST00000630962 RNF146Q9NTX7 359 aa3.72□□□□□ -1.81
SRP54-214ENST00000630962 MSRB1Q9NZV6 116 aa3.72□□□□□ -1.81
SRP54-214ENST00000630962 HERC5Q9UII4 1024 aaKnown RBP3.72□□□□□ -1.81
SRP54-214ENST00000630962 LAMP3Q9UQV4 416 aa3.72□□□□□ -1.81
SRP54-214ENST00000630962 LMTK3Q96Q04 1460 aa3.72□□□□□ -1.81
SRP54-214ENST00000630962 RHODO00212 210 aa3.71□□□□□ -1.82
SRP54-214ENST00000630962 CER1O95813 267 aa3.71□□□□□ -1.82
SRP54-214ENST00000630962 HLA-DQA2P01906 255 aa3.71□□□□□ -1.82
SRP54-214ENST00000630962 WNT1P04628 370 aa3.71□□□□□ -1.82
SRP54-214ENST00000630962 CBSLP0DN79 551 aa3.71□□□□□ -1.82
SRP54-214ENST00000630962 CHRNA5P30532 468 aa3.71□□□□□ -1.82
SRP54-214ENST00000630962 CBSP35520 551 aa3.71□□□□□ -1.82
SRP54-214ENST00000630962 HTR3AP46098 478 aa3.71□□□□□ -1.82
SRP54-214ENST00000630962 POLD2P49005 469 aa3.71□□□□□ -1.82
SRP54-214ENST00000630962 TAS2R50P59544 299 aa3.71□□□□□ -1.82
SRP54-214ENST00000630962 RPL15P61313 204 aaKnown RBP3.71□□□□□ -1.82
SRP54-214ENST00000630962 TNFAIP2Q03169 654 aa3.71□□□□□ -1.82
SRP54-214ENST00000630962 SPARCL1Q14515 664 aa3.71□□□□□ -1.82
SRP54-214ENST00000630962 GRM4Q14833 912 aa3.71□□□□□ -1.82
SRP54-214ENST00000630962 NFRKBQ6P4R8 1299 aa3.71□□□□□ -1.82
SRP54-214ENST00000630962 TOGARAM2Q6ZUX3 1019 aa3.71□□□□□ -1.82
SRP54-214ENST00000630962 RAB11FIP2Q7L804 512 aa3.71□□□□□ -1.82
SRP54-214ENST00000630962 MYLK4Q86YV6 388 aaPredicted RBP3.71□□□□□ -1.82
SRP54-214ENST00000630962 IPO4Q8TEX9 1081 aaKnown RBP3.71□□□□□ -1.82
SRP54-214ENST00000630962 CPT1BQ92523 772 aa3.71□□□□□ -1.82
SRP54-214ENST00000630962 MARK4Q96L34 752 aa3.71□□□□□ -1.82
SRP54-214ENST00000630962 EPS8L2Q9H6S3 715 aa3.71□□□□□ -1.82
SRP54-214ENST00000630962 MLXIPLQ9NP71 852 aa3.71□□□□□ -1.82
SRP54-214ENST00000630962 BAG5Q9UL15 447 aa3.71□□□□□ -1.82
SRP54-214ENST00000630962 SLC12A4Q9UP95 1085 aa3.71□□□□□ -1.82
SRP54-214ENST00000630962 KRTAP29-1A8MX34 341 aaPredicted RBP3.7□□□□□ -1.82
SRP54-214ENST00000630962 KCNJ18B7U540 433 aa3.7□□□□□ -1.82
SRP54-214ENST00000630962 MCIDASD6RGH6 385 aa3.7□□□□□ -1.82
SRP54-214ENST00000630962 M0QZQ0 153 aa3.7□□□□□ -1.82
SRP54-214ENST00000630962 HNRNPRO43390 633 aaKnown RBP3.7□□□□□ -1.82
SRP54-214ENST00000630962 KIF1CO43896 1103 aaKnown RBP3.7□□□□□ -1.82
SRP54-214ENST00000630962 RPP40O75818 363 aaKnown RBP3.7□□□□□ -1.82
SRP54-214ENST00000630962 NDUFB8O95169 186 aa3.7□□□□□ -1.82
SRP54-214ENST00000630962 EPN2O95208 641 aa3.7□□□□□ -1.82
SRP54-214ENST00000630962 IFNA2P01563 188 aa3.7□□□□□ -1.82
SRP54-214ENST00000630962 ALDOCP09972 364 aaKnown RBP3.7□□□□□ -1.82
SRP54-214ENST00000630962 T-ENOLP0DO92 83 aa3.7□□□□□ -1.82
SRP54-214ENST00000630962 AKT1P31749 480 aa3.7□□□□□ -1.82
SRP54-214ENST00000630962 CCKARP32238 428 aa3.7□□□□□ -1.82
SRP54-214ENST00000630962 MCM2P49736 904 aa3.7□□□□□ -1.82
SRP54-214ENST00000630962 ADPRHP54922 357 aa3.7□□□□□ -1.82
SRP54-214ENST00000630962 ICA1Q05084 483 aa3.7□□□□□ -1.82
SRP54-214ENST00000630962 SF3A3Q12874 501 aaKnown RBP eCLIP3.7□□□□□ -1.82
SRP54-214ENST00000630962 GALNT3Q14435 633 aa3.7□□□□□ -1.82
SRP54-214ENST00000630962 PTGR1Q14914 329 aa3.7□□□□□ -1.82
SRP54-214ENST00000630962 BRD3Q15059 726 aa3.7□□□□□ -1.82
SRP54-214ENST00000630962 SMTNL2Q2TAL5 461 aa3.7□□□□□ -1.82
SRP54-214ENST00000630962 ZACNQ401N2 412 aa3.7□□□□□ -1.82
SRP54-214ENST00000630962 ALG10Q5BKT4 473 aa3.7□□□□□ -1.82
SRP54-214ENST00000630962 ALG10BQ5I7T1 473 aa3.7□□□□□ -1.82
SRP54-214ENST00000630962 KLBQ86Z14 1044 aa3.7□□□□□ -1.82
SRP54-214ENST00000630962 CCDC146Q8IYE0 955 aa3.7□□□□□ -1.82
SRP54-214ENST00000630962 ADGRF3Q8IZF5 1079 aa3.7□□□□□ -1.82
SRP54-214ENST00000630962 HMGB4Q8WW32 186 aa3.7□□□□□ -1.82
SRP54-214ENST00000630962 LTV1Q96GA3 475 aaPredicted RBP3.7□□□□□ -1.82
SRP54-214ENST00000630962 THOC3Q96J01 351 aaKnown RBP3.7□□□□□ -1.82
SRP54-214ENST00000630962 ZNF347Q96SE7 839 aa3.7□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms