RNA–Protein interactions for RNA: ENST00000628915.2

R3HDM1-220, Transcript of R3H domain containing 1, humanhuman

TSL 5 BASIC

Gene R3HDM1, Length 4,325 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-220ENST00000628915 L7N2F9 121 aa3.98□□□□□ -1.77
R3HDM1-220ENST00000628915 GTPBP1O00178 669 aaKnown RBP3.98□□□□□ -1.77
R3HDM1-220ENST00000628915 TRAF5O00463 557 aa3.98□□□□□ -1.77
R3HDM1-220ENST00000628915 B4GAT1O43505 415 aa3.98□□□□□ -1.77
R3HDM1-220ENST00000628915 GREM1O60565 184 aa3.98□□□□□ -1.77
R3HDM1-220ENST00000628915 JAK2O60674 1132 aa3.98□□□□□ -1.77
R3HDM1-220ENST00000628915 CTNND1O60716 968 aaKnown RBP3.98□□□□□ -1.77
R3HDM1-220ENST00000628915 KRT34O76011 436 aa3.98□□□□□ -1.77
R3HDM1-220ENST00000628915 ASLP04424 464 aa3.98□□□□□ -1.77
R3HDM1-220ENST00000628915 USP17L8P0C7I0 530 aa3.98□□□□□ -1.77
R3HDM1-220ENST00000628915 KRT3P12035 628 aa3.98□□□□□ -1.77
R3HDM1-220ENST00000628915 ITGB6P18564 788 aa3.98□□□□□ -1.77
R3HDM1-220ENST00000628915 POU3F4P49335 361 aa3.98□□□□□ -1.77
R3HDM1-220ENST00000628915 HARS2P49590 506 aaKnown RBP3.98□□□□□ -1.77
R3HDM1-220ENST00000628915 NT5C2P49902 561 aa3.98□□□□□ -1.77
R3HDM1-220ENST00000628915 PTH1RQ03431 593 aa3.98□□□□□ -1.77
R3HDM1-220ENST00000628915 SQSTM1Q13501 440 aa3.98□□□□□ -1.77
R3HDM1-220ENST00000628915 NAB1Q13506 487 aa3.98□□□□□ -1.77
R3HDM1-220ENST00000628915 KYAT1Q16773 422 aa3.98□□□□□ -1.77
R3HDM1-220ENST00000628915 UAP1L1Q3KQV9 507 aa3.98□□□□□ -1.77
R3HDM1-220ENST00000628915 Q5PR19 223 aa3.98□□□□□ -1.77
R3HDM1-220ENST00000628915 MEI1Q5TIA1 1274 aa3.98□□□□□ -1.77
R3HDM1-220ENST00000628915 ANO7Q6IWH7 933 aa3.98□□□□□ -1.77
R3HDM1-220ENST00000628915 XKR5Q6UX68 686 aa3.98□□□□□ -1.77
R3HDM1-220ENST00000628915 PSTKQ8IV42 348 aaKnown RBP3.98□□□□□ -1.77
R3HDM1-220ENST00000628915 KBTBD2Q8IY47 623 aa3.98□□□□□ -1.77
R3HDM1-220ENST00000628915 EIF1ADQ8N9N8 165 aaKnown RBP3.98□□□□□ -1.77
R3HDM1-220ENST00000628915 NKX2-3Q8TAU0 364 aa3.98□□□□□ -1.77
R3HDM1-220ENST00000628915 DNAJC9Q8WXX5 260 aa3.98□□□□□ -1.77
R3HDM1-220ENST00000628915 RSC1A1Q92681 617 aa3.98□□□□□ -1.77
R3HDM1-220ENST00000628915 KHSRPQ92945 711 aaKnown RBP eCLIP3.98□□□□□ -1.779e-7■■■■□ 25.1
R3HDM1-220ENST00000628915 MYDGFQ969H8 173 aa3.98□□□□□ -1.77
R3HDM1-220ENST00000628915 GJA10Q969M2 543 aa3.98□□□□□ -1.77
R3HDM1-220ENST00000628915 EME1Q96AY2 570 aa3.98□□□□□ -1.77
R3HDM1-220ENST00000628915 HINFPQ9BQA5 517 aa3.98□□□□□ -1.77
R3HDM1-220ENST00000628915 ISCA1Q9BUE6 129 aa3.98□□□□□ -1.77
R3HDM1-220ENST00000628915 CCDC90BQ9GZT6 254 aa3.98□□□□□ -1.77
R3HDM1-220ENST00000628915 SMYD3Q9H7B4 428 aa3.98□□□□□ -1.77
R3HDM1-220ENST00000628915 TMBIM4Q9HC24 238 aa3.98□□□□□ -1.77
R3HDM1-220ENST00000628915 ITM2CQ9NQX7 267 aa3.98□□□□□ -1.77
R3HDM1-220ENST00000628915 SNTG1Q9NSN8 517 aa3.98□□□□□ -1.77
R3HDM1-220ENST00000628915 INTS7Q9NVH2 962 aaKnown RBP3.98□□□□□ -1.77
R3HDM1-220ENST00000628915 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP3.98□□□□□ -1.77
R3HDM1-220ENST00000628915 IL37Q9NZH6 218 aa3.98□□□□□ -1.77
R3HDM1-220ENST00000628915 TRPM5Q9NZQ8 1165 aa3.98□□□□□ -1.77
R3HDM1-220ENST00000628915 CFAP97Q9P2B7 532 aa3.98□□□□□ -1.77
R3HDM1-220ENST00000628915 RNF24Q9Y225 148 aa3.98□□□□□ -1.77
R3HDM1-220ENST00000628915 AKT3Q9Y243 479 aa3.98□□□□□ -1.77
R3HDM1-220ENST00000628915 COQ6Q9Y2Z9 468 aa3.98□□□□□ -1.77
R3HDM1-220ENST00000628915 COL3A1P02461 1466 aaPredicted RBP3.98□□□□□ -1.77
R3HDM1-220ENST00000628915 ZNF536O15090 1300 aa3.98□□□□□ -1.77
R3HDM1-220ENST00000628915 USP42Q9H9J4 1324 aaKnown RBP3.98□□□□□ -1.77
R3HDM1-220ENST00000628915 A0A0U1RQK1 487 aa3.98□□□□□ -1.77
R3HDM1-220ENST00000628915 ZNF320A2RRD8 509 aa3.98□□□□□ -1.77
R3HDM1-220ENST00000628915 K7ERQ8 282 aa3.98□□□□□ -1.77
R3HDM1-220ENST00000628915 ARHGAP33O14559 1287 aa3.98□□□□□ -1.77
R3HDM1-220ENST00000628915 NUPL2O15504 423 aaKnown RBP3.98□□□□□ -1.77
R3HDM1-220ENST00000628915 DOK2O60496 412 aa3.98□□□□□ -1.77
R3HDM1-220ENST00000628915 EFCAB14O75071 495 aa3.98□□□□□ -1.77
R3HDM1-220ENST00000628915 ACADMP11310 421 aa3.98□□□□□ -1.77
R3HDM1-220ENST00000628915 LCP1P13796 627 aa3.98□□□□□ -1.77
R3HDM1-220ENST00000628915 HNF1AP20823 631 aa3.98□□□□□ -1.77
R3HDM1-220ENST00000628915 SERPINB1P30740 379 aa3.98□□□□□ -1.77
R3HDM1-220ENST00000628915 PPM1AP35813 382 aa3.98□□□□□ -1.77
R3HDM1-220ENST00000628915 SLC26A3P40879 764 aa3.98□□□□□ -1.77
R3HDM1-220ENST00000628915 DPP6P42658 865 aa3.98□□□□□ -1.77
R3HDM1-220ENST00000628915 LIG4P49917 911 aa3.98□□□□□ -1.77
R3HDM1-220ENST00000628915 BCAP31P51572 246 aa3.98□□□□□ -1.77
R3HDM1-220ENST00000628915 SLC7A2P52569 658 aa3.98□□□□□ -1.77
R3HDM1-220ENST00000628915 SCAND1P57086 179 aa3.98□□□□□ -1.77
R3HDM1-220ENST00000628915 HNRNPDQ14103 355 aaKnown RBP3.98□□□□□ -1.77
R3HDM1-220ENST00000628915 TOB2Q14106 344 aaPredicted RBP3.98□□□□□ -1.77
R3HDM1-220ENST00000628915 SMCO1Q147U7 214 aa3.98□□□□□ -1.77
R3HDM1-220ENST00000628915 RRS1Q15050 365 aaKnown RBP3.98□□□□□ -1.77
R3HDM1-220ENST00000628915 PDIA6Q15084 440 aa3.98□□□□□ -1.77
R3HDM1-220ENST00000628915 ZNF423Q2M1K9 1284 aa3.98□□□□□ -1.77
R3HDM1-220ENST00000628915 TRIM16LQ309B1 348 aa3.98□□□□□ -1.77
R3HDM1-220ENST00000628915 RUNDC3AQ59EK9 446 aa3.98□□□□□ -1.77
R3HDM1-220ENST00000628915 FIGNQ5HY92 759 aa3.98□□□□□ -1.77
R3HDM1-220ENST00000628915 C12orf60Q5U649 245 aa3.98□□□□□ -1.77
R3HDM1-220ENST00000628915 IL23RQ5VWK5 629 aa3.98□□□□□ -1.77
R3HDM1-220ENST00000628915 SSX9Q7RTT3 188 aa3.98□□□□□ -1.77
R3HDM1-220ENST00000628915 CROCCP2Q86T23 111 aa3.98□□□□□ -1.77
R3HDM1-220ENST00000628915 TMC8Q8IU68 726 aa3.98□□□□□ -1.77
R3HDM1-220ENST00000628915 SLC41A1Q8IVJ1 513 aa3.98□□□□□ -1.77
R3HDM1-220ENST00000628915 ARHGAP24Q8N264 748 aa3.98□□□□□ -1.77
R3HDM1-220ENST00000628915 TERB1Q8NA31 727 aa3.98□□□□□ -1.77
R3HDM1-220ENST00000628915 TMIGD2Q96BF3 282 aa3.98□□□□□ -1.77
R3HDM1-220ENST00000628915 MFSD3Q96ES6 412 aa3.98□□□□□ -1.77
R3HDM1-220ENST00000628915 PTCD3Q96EY7 689 aaKnown RBP3.98□□□□□ -1.77
R3HDM1-220ENST00000628915 RMND5BQ96G75 393 aaPredicted RBP3.98□□□□□ -1.77
R3HDM1-220ENST00000628915 PPP1R2P1Q96PQ5 205 aa3.98□□□□□ -1.77
R3HDM1-220ENST00000628915 RBM4BQ9BQ04 359 aaKnown RBP3.98□□□□□ -1.77
R3HDM1-220ENST00000628915 TMEM79Q9BSE2 394 aa3.98□□□□□ -1.77
R3HDM1-220ENST00000628915 RBM4Q9BWF3 364 aaKnown RBP3.98□□□□□ -1.77
R3HDM1-220ENST00000628915 CHID1Q9BWS9 393 aa3.98□□□□□ -1.77
R3HDM1-220ENST00000628915 DCLK3Q9C098 648 aa3.98□□□□□ -1.77
R3HDM1-220ENST00000628915 IL25Q9H293 177 aa3.98□□□□□ -1.77
R3HDM1-220ENST00000628915 KLHL31Q9H511 634 aa3.98□□□□□ -1.77
R3HDM1-220ENST00000628915 SP110Q9HB58 689 aa3.98□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms