RNA–Protein interactions for RNA: ENST00000626236.2

SGMS1-211, Transcript of sphingomyelin synthase 1, humanhuman

TSL 1 (best)

Gene SGMS1, Length 1,013 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGMS1-211ENST00000626236 CCDC50Q8IVM0 306 aa8.79□□□□□ -1
SGMS1-211ENST00000626236 MAP7D3Q8IWC1 876 aa8.79□□□□□ -1
SGMS1-211ENST00000626236 KATNAL2Q8IYT4 538 aa8.79□□□□□ -1
SGMS1-211ENST00000626236 CFAP52Q8N1V2 620 aa8.79□□□□□ -1
SGMS1-211ENST00000626236 CPXM2Q8N436 756 aa8.79□□□□□ -1
SGMS1-211ENST00000626236 KIAA1958Q8N8K9 716 aa8.79□□□□□ -1
SGMS1-211ENST00000626236 TTC8Q8TAM2 541 aa8.79□□□□□ -1
SGMS1-211ENST00000626236 DDI1Q8WTU0 396 aa8.79□□□□□ -1
SGMS1-211ENST00000626236 RAPGEF5Q92565 580 aa8.79□□□□□ -1
SGMS1-211ENST00000626236 ALG3Q92685 438 aa8.79□□□□□ -1
SGMS1-211ENST00000626236 ATP2A3Q93084 1043 aa8.79□□□□□ -1
SGMS1-211ENST00000626236 BHMTQ93088 406 aa8.79□□□□□ -1
SGMS1-211ENST00000626236 IGSF8Q969P0 613 aa8.79□□□□□ -1
SGMS1-211ENST00000626236 NXPE3Q969Y0 559 aa8.79□□□□□ -1
SGMS1-211ENST00000626236 OTUB2Q96DC9 234 aa8.79□□□□□ -1
SGMS1-211ENST00000626236 TBC1D31Q96DN5 1066 aa8.79□□□□□ -1
SGMS1-211ENST00000626236 MYEOVQ96EZ4 313 aa8.79□□□□□ -1
SGMS1-211ENST00000626236 PRICKLE1Q96MT3 831 aaPredicted RBP8.79□□□□□ -1
SGMS1-211ENST00000626236 RPRD1AQ96P16 312 aaPredicted RBP8.79□□□□□ -1
SGMS1-211ENST00000626236 ASB2Q96Q27 587 aa8.79□□□□□ -1
SGMS1-211ENST00000626236 WDR24Q96S15 920 aa8.79□□□□□ -1
SGMS1-211ENST00000626236 PSMB7Q99436 277 aa8.79□□□□□ -1
SGMS1-211ENST00000626236 EPAS1Q99814 870 aa8.79□□□□□ -1
SGMS1-211ENST00000626236 CALN1Q9BXU9 219 aa8.79□□□□□ -1
SGMS1-211ENST00000626236 PCDH18Q9HCL0 1135 aa8.79□□□□□ -1
SGMS1-211ENST00000626236 IGSF9Q9P2J2 1179 aa8.79□□□□□ -1
SGMS1-211ENST00000626236 JRKLQ9Y4A0 524 aa8.79□□□□□ -1
SGMS1-211ENST00000626236 NEDD8-MDP1E9PL57 170 aa8.78□□□□□ -1
SGMS1-211ENST00000626236 H3BRJ5 948 aa8.78□□□□□ -1
SGMS1-211ENST00000626236 CHADO15335 359 aa8.78□□□□□ -1
SGMS1-211ENST00000626236 DAPK3O43293 454 aa8.78□□□□□ -1
SGMS1-211ENST00000626236 TBL1XO60907 577 aa8.78□□□□□ -1
SGMS1-211ENST00000626236 LRIG2O94898 1065 aa8.78□□□□□ -1
SGMS1-211ENST00000626236 CYBBP04839 570 aa8.78□□□□□ -1
SGMS1-211ENST00000626236 ATP1A1P05023 1023 aaKnown RBP8.78□□□□□ -1
SGMS1-211ENST00000626236 CYP17A1P05093 508 aa8.78□□□□□ -1
SGMS1-211ENST00000626236 BMP1P13497 986 aa8.78□□□□□ -1
SGMS1-211ENST00000626236 KDELR1P24390 212 aa8.78□□□□□ -1
SGMS1-211ENST00000626236 EPHB2P29323 1055 aa8.78□□□□□ -1
SGMS1-211ENST00000626236 ARL4AP40617 200 aa8.78□□□□□ -1
SGMS1-211ENST00000626236 PEX5P50542 639 aa8.78□□□□□ -1
SGMS1-211ENST00000626236 IRAK1P51617 712 aa8.78□□□□□ -1
SGMS1-211ENST00000626236 ARSEP51690 589 aa8.78□□□□□ -1
SGMS1-211ENST00000626236 RPS24P62847 133 aaKnown RBP8.78□□□□□ -1
SGMS1-211ENST00000626236 NRG1Q02297 640 aaPredicted RBP8.78□□□□□ -1
SGMS1-211ENST00000626236 TNK2Q07912 1038 aa8.78□□□□□ -1
SGMS1-211ENST00000626236 MMRN1Q13201 1228 aa8.78□□□□□ -1
SGMS1-211ENST00000626236 SEMA3BQ13214 749 aa8.78□□□□□ -1
SGMS1-211ENST00000626236 ZNF211Q13398 564 aaPredicted RBP8.78□□□□□ -1
SGMS1-211ENST00000626236 DPYSL3Q14195 570 aa8.78□□□□□ -1
SGMS1-211ENST00000626236 PDK2Q15119 407 aa8.78□□□□□ -1
SGMS1-211ENST00000626236 DHCR24Q15392 516 aa8.78□□□□□ -1
SGMS1-211ENST00000626236 MPPE1Q53F39 396 aa8.78□□□□□ -1
SGMS1-211ENST00000626236 LY6G5CQ5SRR4 150 aa8.78□□□□□ -1
SGMS1-211ENST00000626236 RFX8Q6ZV50 586 aa8.78□□□□□ -1
SGMS1-211ENST00000626236 NYAP1Q6ZVC0 841 aa8.78□□□□□ -1
SGMS1-211ENST00000626236 CIR1Q86X95 450 aaPredicted RBP8.78□□□□□ -1
SGMS1-211ENST00000626236 TMEM25Q86YD3 366 aa8.78□□□□□ -1
SGMS1-211ENST00000626236 ZNF683Q8IZ20 524 aa8.78□□□□□ -1
SGMS1-211ENST00000626236 ADGRG2Q8IZP9 1017 aa8.78□□□□□ -1
SGMS1-211ENST00000626236 SLC44A3Q8N4M1 653 aa8.78□□□□□ -1
SGMS1-211ENST00000626236 HJURPQ8NCD3 748 aaPredicted RBP8.78□□□□□ -1
SGMS1-211ENST00000626236 EXD1Q8NHP7 514 aa8.78□□□□□ -1
SGMS1-211ENST00000626236 FAM71BQ8TC56 605 aa8.78□□□□□ -1
SGMS1-211ENST00000626236 IRF7Q92985 503 aa8.78□□□□□ -1
SGMS1-211ENST00000626236 TMA16Q96EY4 203 aaKnown RBP8.78□□□□□ -1
SGMS1-211ENST00000626236 RBM41Q96IZ5 413 aaKnown RBP8.78□□□□□ -1
SGMS1-211ENST00000626236 FAM83CQ9BQN1 747 aa8.78□□□□□ -1
SGMS1-211ENST00000626236 BBS2Q9BXC9 721 aa8.78□□□□□ -1
SGMS1-211ENST00000626236 TLR10Q9BXR5 811 aa8.78□□□□□ -1
SGMS1-211ENST00000626236 ZYG11BQ9C0D3 744 aa8.78□□□□□ -1
SGMS1-211ENST00000626236 BRD9Q9H8M2 597 aa8.78□□□□□ -1
SGMS1-211ENST00000626236 HPS4Q9NQG7 708 aa8.78□□□□□ -1
SGMS1-211ENST00000626236 SPHK2Q9NRA0 654 aa8.78□□□□□ -1
SGMS1-211ENST00000626236 PLK2Q9NYY3 685 aa8.78□□□□□ -1
SGMS1-211ENST00000626236 MPP6Q9NZW5 540 aa8.78□□□□□ -1
SGMS1-211ENST00000626236 CWC15Q9P013 229 aaKnown RBP8.78□□□□□ -1
SGMS1-211ENST00000626236 STIM2Q9P246 746 aa8.78□□□□□ -1
SGMS1-211ENST00000626236 PPARGC1AQ9UBK2 798 aaKnown RBP8.78□□□□□ -1
SGMS1-211ENST00000626236 DNAI1Q9UI46 699 aa8.78□□□□□ -1
SGMS1-211ENST00000626236 NEU3Q9UQ49 428 aa8.78□□□□□ -1
SGMS1-211ENST00000626236 IGLV3-10A0A075B6K4 115 aa8.77□□□□□ -1.01
SGMS1-211ENST00000626236 CTAGE9A4FU28 777 aa8.77□□□□□ -1.01
SGMS1-211ENST00000626236 C3orf70A6NLC5 250 aaPredicted RBP8.77□□□□□ -1.01
SGMS1-211ENST00000626236 DRGXA6NNA5 263 aa8.77□□□□□ -1.01
SGMS1-211ENST00000626236 GFRA2O00451 464 aa8.77□□□□□ -1.01
SGMS1-211ENST00000626236 KCNK3O14649 394 aa8.77□□□□□ -1.01
SGMS1-211ENST00000626236 FGF10O15520 208 aaPredicted RBP8.77□□□□□ -1.01
SGMS1-211ENST00000626236 NARSO43776 548 aaKnown RBP8.77□□□□□ -1.01
SGMS1-211ENST00000626236 CNTN5O94779 1100 aa8.77□□□□□ -1.01
SGMS1-211ENST00000626236 ZRANB2O95218 330 aaKnown RBP eCLIP8.77□□□□□ -1.01
SGMS1-211ENST00000626236 ADH1CP00326 375 aa8.77□□□□□ -1.01
SGMS1-211ENST00000626236 PYGMP11217 842 aa8.77□□□□□ -1.01
SGMS1-211ENST00000626236 ADH5P11766 374 aa8.77□□□□□ -1.01
SGMS1-211ENST00000626236 HOXC13P31276 330 aa8.77□□□□□ -1.01
SGMS1-211ENST00000626236 CASQ1P31415 396 aa8.77□□□□□ -1.01
SGMS1-211ENST00000626236 HTR7P34969 479 aa8.77□□□□□ -1.01
SGMS1-211ENST00000626236 ZNF135P52742 658 aaPredicted RBP8.77□□□□□ -1.01
SGMS1-211ENST00000626236 ETF1P62495 437 aaKnown RBP8.77□□□□□ -1.01
SGMS1-211ENST00000626236 GAD2Q05329 585 aa8.77□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms