RNA–Protein interactions for RNA: ENST00000625423.2

VARS2-213, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 2 BASIC

Gene VARS2, Length 3,362 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-213ENST00000625423 ADIGQ0VDE8 80 aa11.56□□□□□ -0.56
VARS2-213ENST00000625423 SLC25A52Q3SY17 297 aa11.56□□□□□ -0.56
VARS2-213ENST00000625423 RALGPS1Q5JS13 557 aa11.56□□□□□ -0.56
VARS2-213ENST00000625423 CMC1Q7Z7K0 106 aa11.56□□□□□ -0.56
VARS2-213ENST00000625423 ZNF567Q8N184 647 aa11.56□□□□□ -0.56
VARS2-213ENST00000625423 PPP4R1Q8TF05 950 aa11.56□□□□□ -0.56
VARS2-213ENST00000625423 RNF139Q8WU17 664 aa11.56□□□□□ -0.56
VARS2-213ENST00000625423 SIKE1Q9BRV8 207 aa11.56□□□□□ -0.56
VARS2-213ENST00000625423 PPP1R12CQ9BZL4 782 aa11.56□□□□□ -0.56
VARS2-213ENST00000625423 VCXQ9H320 206 aa11.56□□□□□ -0.56
VARS2-213ENST00000625423 EIF2B3Q9NR50 452 aaKnown RBP11.56□□□□□ -0.56
VARS2-213ENST00000625423 COPG2Q9UBF2 871 aa11.56□□□□□ -0.56
VARS2-213ENST00000625423 PPM1HQ9ULR3 514 aa11.56□□□□□ -0.56
VARS2-213ENST00000625423 RPS6KL1Q9Y6S9 549 aa11.56□□□□□ -0.56
VARS2-213ENST00000625423 KPNA7A9QM74 516 aa11.56□□□□□ -0.56
VARS2-213ENST00000625423 PSEN1P49768 467 aa11.56□□□□□ -0.56
VARS2-213ENST00000625423 IDH3AP50213 366 aa11.56□□□□□ -0.56
VARS2-213ENST00000625423 HIC1Q14526 733 aa11.56□□□□□ -0.56
VARS2-213ENST00000625423 EFHC1Q5JVL4 640 aa11.56□□□□□ -0.56
VARS2-213ENST00000625423 PIGZQ86VD9 579 aa11.56□□□□□ -0.56
VARS2-213ENST00000625423 CCNJLQ8IV13 435 aa11.56□□□□□ -0.56
VARS2-213ENST00000625423 HSFY1Q96LI6 401 aa11.56□□□□□ -0.56
VARS2-213ENST00000625423 FCRL3Q96P31 734 aaPredicted RBP11.56□□□□□ -0.56
VARS2-213ENST00000625423 ADAMTS10Q9H324 1103 aa11.56□□□□□ -0.56
VARS2-213ENST00000625423 GOLGA2P5Q9HBQ8 144 aa11.56□□□□□ -0.56
VARS2-213ENST00000625423 SCOCQ9UIL1 159 aa11.56□□□□□ -0.56
VARS2-213ENST00000625423 MYO18AQ92614 2054 aaKnown RBP11.56□□□□□ -0.56
VARS2-213ENST00000625423 KCNK1O00180 336 aa11.55□□□□□ -0.56
VARS2-213ENST00000625423 USP12O75317 370 aa11.55□□□□□ -0.56
VARS2-213ENST00000625423 YY1P25490 414 aa11.55□□□□□ -0.56
VARS2-213ENST00000625423 GLUD2P49448 558 aa11.55□□□□□ -0.56
VARS2-213ENST00000625423 PPIL2Q13356 520 aa11.55□□□□□ -0.56
VARS2-213ENST00000625423 ITGA9Q13797 1035 aa11.55□□□□□ -0.56
VARS2-213ENST00000625423 ZNF792Q3KQV3 632 aa11.55□□□□□ -0.56
VARS2-213ENST00000625423 OTUD1Q5VV17 481 aaPredicted RBP11.55□□□□□ -0.56
VARS2-213ENST00000625423 ALKAL1Q6UXT8 129 aa11.55□□□□□ -0.56
VARS2-213ENST00000625423 PID1Q7Z2X4 250 aa11.55□□□□□ -0.56
VARS2-213ENST00000625423 AGAP3Q96P47 875 aa11.55□□□□□ -0.56
VARS2-213ENST00000625423 OSMRQ99650 979 aa11.55□□□□□ -0.56
VARS2-213ENST00000625423 NDE1Q9NXR1 346 aa11.55□□□□□ -0.56
VARS2-213ENST00000625423 RCOR3Q9P2K3 495 aaPredicted RBP11.55□□□□□ -0.56
VARS2-213ENST00000625423 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP11.55□□□□□ -0.56
VARS2-213ENST00000625423 PIRO00625 290 aa11.55□□□□□ -0.56
VARS2-213ENST00000625423 KLHL2O95198 593 aa11.55□□□□□ -0.56
VARS2-213ENST00000625423 POLBP06746 335 aa11.55□□□□□ -0.56
VARS2-213ENST00000625423 RALBP11234 206 aa11.55□□□□□ -0.56
VARS2-213ENST00000625423 IFRD2Q12894 506 aaPredicted RBP11.55□□□□□ -0.56
VARS2-213ENST00000625423 NME3Q13232 169 aa11.55□□□□□ -0.56
VARS2-213ENST00000625423 PDK1Q15118 436 aa11.55□□□□□ -0.56
VARS2-213ENST00000625423 OR52E8Q6IFG1 317 aa11.55□□□□□ -0.56
VARS2-213ENST00000625423 IZUMO2Q6UXV1 221 aa11.55□□□□□ -0.56
VARS2-213ENST00000625423 FASTKD5Q7L8L6 764 aaKnown RBP11.55□□□□□ -0.56
VARS2-213ENST00000625423 TNS4Q8IZW8 715 aa11.55□□□□□ -0.56
VARS2-213ENST00000625423 OR52K1Q8NGK4 314 aa11.55□□□□□ -0.56
VARS2-213ENST00000625423 CERS2Q96G23 380 aa11.55□□□□□ -0.56
VARS2-213ENST00000625423 STN1Q9H668 368 aaKnown RBP11.55□□□□□ -0.56
VARS2-213ENST00000625423 VTA1Q9NP79 307 aa11.55□□□□□ -0.56
VARS2-213ENST00000625423 ADARB2Q9NS39 739 aaKnown RBP11.55□□□□□ -0.56
VARS2-213ENST00000625423 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.55□□□□□ -0.56
VARS2-213ENST00000625423 UBQLN1Q9UMX0 589 aaKnown RBP11.55□□□□□ -0.56
VARS2-213ENST00000625423 PLXNA1Q9UIW2 1896 aa11.55□□□□□ -0.56
VARS2-213ENST00000625423 M0QYT0 321 aa11.54□□□□□ -0.56
VARS2-213ENST00000625423 CLDN5O00501 218 aa11.54□□□□□ -0.56
VARS2-213ENST00000625423 SORBS2O94875 1100 aaKnown RBP11.54□□□□□ -0.56
VARS2-213ENST00000625423 GP5P40197 560 aa11.54□□□□□ -0.56
VARS2-213ENST00000625423 NDUFV1P49821 464 aa11.54□□□□□ -0.56
VARS2-213ENST00000625423 COPAP53621 1224 aa11.54□□□□□ -0.56
VARS2-213ENST00000625423 ABCE1P61221 599 aaKnown RBP11.54□□□□□ -0.56
VARS2-213ENST00000625423 NAB1Q13506 487 aa11.54□□□□□ -0.56
VARS2-213ENST00000625423 RNF220Q5VTB9 566 aa11.54□□□□□ -0.56
VARS2-213ENST00000625423 NOTUMQ6P988 496 aa11.54□□□□□ -0.56
VARS2-213ENST00000625423 DCLK2Q8N568 766 aa11.54□□□□□ -0.56
VARS2-213ENST00000625423 APPL2Q8NEU8 664 aa11.54□□□□□ -0.56
VARS2-213ENST00000625423 GATA6Q92908 595 aa11.54□□□□□ -0.56
VARS2-213ENST00000625423 AZIN2Q96A70 460 aa11.54□□□□□ -0.56
VARS2-213ENST00000625423 EMID1Q96A84 441 aaPredicted RBP11.54□□□□□ -0.56
VARS2-213ENST00000625423 SGIP1Q9BQI5 828 aa11.54□□□□□ -0.56
VARS2-213ENST00000625423 FERMT1Q9BQL6 677 aa11.54□□□□□ -0.56
VARS2-213ENST00000625423 NAT9Q9BTE0 207 aa11.54□□□□□ -0.56
VARS2-213ENST00000625423 SNX15Q9NRS6 342 aa11.54□□□□□ -0.56
VARS2-213ENST00000625423 MAGED2Q9UNF1 606 aaPredicted RBP11.54□□□□□ -0.56
VARS2-213ENST00000625423 BEST1O76090 585 aa11.54□□□□□ -0.56
VARS2-213ENST00000625423 NCF2P19878 526 aaPredicted RBP11.54□□□□□ -0.56
VARS2-213ENST00000625423 GRK2P25098 689 aa11.54□□□□□ -0.56
VARS2-213ENST00000625423 EPHB1P54762 984 aa11.54□□□□□ -0.56
VARS2-213ENST00000625423 INSCQ1MX18 579 aa11.54□□□□□ -0.56
VARS2-213ENST00000625423 SYPL2Q5VXT5 272 aa11.54□□□□□ -0.56
VARS2-213ENST00000625423 PDPK2PQ6A1A2 396 aa11.54□□□□□ -0.56
VARS2-213ENST00000625423 PLD6Q8N2A8 252 aaKnown RBP11.54□□□□□ -0.56
VARS2-213ENST00000625423 PHC3Q8NDX5 983 aa11.54□□□□□ -0.56
VARS2-213ENST00000625423 PYDC1Q8WXC3 89 aa11.54□□□□□ -0.56
VARS2-213ENST00000625423 CYP4F11Q9HBI6 524 aa11.54□□□□□ -0.56
VARS2-213ENST00000625423 GPAMQ9HCL2 828 aa11.54□□□□□ -0.56
VARS2-213ENST00000625423 LOC100653049A0A140TA62 436 aa11.54□□□□□ -0.56
VARS2-213ENST00000625423 SMIM28A0A1B0GU29 152 aa11.54□□□□□ -0.56
VARS2-213ENST00000625423 ZNF195O14628 629 aa11.54□□□□□ -0.56
VARS2-213ENST00000625423 PPP1R12AO14974 1030 aaPredicted RBP11.54□□□□□ -0.56
VARS2-213ENST00000625423 XPO1O14980 1071 aaKnown RBP11.54□□□□□ -0.56
VARS2-213ENST00000625423 SMIM24O75264 130 aa11.54□□□□□ -0.56
VARS2-213ENST00000625423 GPR32O75388 356 aa11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms