RNA–Protein interactions for RNA: ENST00000622697.4

GABRB3-215, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 5 BASIC

Gene GABRB3, Length 5,876 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-215ENST00000622697 SPOCK2Q92563 424 aa16.49■□□□□ 0.23
GABRB3-215ENST00000622697 RBBP8Q99708 897 aa16.49■□□□□ 0.23
GABRB3-215ENST00000622697 COPS7BQ9H9Q2 264 aaPredicted RBP16.49■□□□□ 0.23
GABRB3-215ENST00000622697 LRCH1Q9Y2L9 728 aa16.49■□□□□ 0.23
GABRB3-215ENST00000622697 PPP2R3BQ9Y5P8 575 aa16.49■□□□□ 0.23
GABRB3-215ENST00000622697 TCRBV9S1A1TA0A576 114 aa16.49■□□□□ 0.23
GABRB3-215ENST00000622697 ERBB2P04626 1255 aa16.49■□□□□ 0.23
GABRB3-215ENST00000622697 CDH2P19022 906 aaPredicted RBP16.49■□□□□ 0.23
GABRB3-215ENST00000622697 PCYT1AP49585 367 aa16.49■□□□□ 0.23
GABRB3-215ENST00000622697 MRPS22P82650 360 aaKnown RBP16.49■□□□□ 0.23
GABRB3-215ENST00000622697 GPR141Q7Z602 305 aa16.49■□□□□ 0.23
GABRB3-215ENST00000622697 C11orf96Q7Z7L8 435 aa16.49■□□□□ 0.23
GABRB3-215ENST00000622697 TRABD2AQ86V40 505 aa16.49■□□□□ 0.23
GABRB3-215ENST00000622697 TNS4Q8IZW8 715 aa16.49■□□□□ 0.23
GABRB3-215ENST00000622697 SMARCD1Q96GM5 515 aa16.49■□□□□ 0.23
GABRB3-215ENST00000622697 ACOX2Q99424 681 aa16.49■□□□□ 0.23
GABRB3-215ENST00000622697 MID1IP1Q9NPA3 183 aa16.49■□□□□ 0.23
GABRB3-215ENST00000622697 EXOSC4Q9NPD3 245 aaKnown RBP16.49■□□□□ 0.23
GABRB3-215ENST00000622697 RGS18Q9NS28 235 aa16.49■□□□□ 0.23
GABRB3-215ENST00000622697 SPASTQ9UBP0 616 aa16.49■□□□□ 0.23
GABRB3-215ENST00000622697 VPS28Q9UK41 221 aa16.49■□□□□ 0.23
GABRB3-215ENST00000622697 NID2Q14112 1375 aa16.49■□□□□ 0.23
GABRB3-215ENST00000622697 A0A0A0MRY4 1105 aa16.49■□□□□ 0.23
GABRB3-215ENST00000622697 ST8SIA6P61647 398 aa16.49■□□□□ 0.23
GABRB3-215ENST00000622697 UBE3AQ05086 875 aa16.49■□□□□ 0.23
GABRB3-215ENST00000622697 SPATA13Q96N96 652 aa16.49■□□□□ 0.23
GABRB3-215ENST00000622697 TBC1D13Q9NVG8 400 aa16.49■□□□□ 0.23
GABRB3-215ENST00000622697 LTFP02788 710 aa16.49■□□□□ 0.23
GABRB3-215ENST00000622697 OR1E1P30953 314 aa16.49■□□□□ 0.23
GABRB3-215ENST00000622697 SERPINB10P48595 397 aa16.49■□□□□ 0.23
GABRB3-215ENST00000622697 CLK2P49760 499 aaKnown RBP16.49■□□□□ 0.23
GABRB3-215ENST00000622697 NAGLUP54802 743 aa16.49■□□□□ 0.23
GABRB3-215ENST00000622697 PGS1Q32NB8 556 aa16.49■□□□□ 0.23
GABRB3-215ENST00000622697 KYAT3Q6YP21 454 aaKnown RBP16.49■□□□□ 0.23
GABRB3-215ENST00000622697 OR6Y1Q8NGX8 325 aa16.49■□□□□ 0.23
GABRB3-215ENST00000622697 B3GNT5Q9BYG0 378 aa16.49■□□□□ 0.23
GABRB3-215ENST00000622697 PAPOLBQ9NRJ5 636 aaKnown RBP16.49■□□□□ 0.23
GABRB3-215ENST00000622697 CLDN5O00501 218 aa16.48■□□□□ 0.23
GABRB3-215ENST00000622697 LYPLA1O75608 230 aaPredicted RBP16.48■□□□□ 0.23
GABRB3-215ENST00000622697 FAM155BO75949 473 aa16.48■□□□□ 0.23
GABRB3-215ENST00000622697 RHOCP08134 193 aa16.48■□□□□ 0.23
GABRB3-215ENST00000622697 TPBGLP0DKB5 382 aa16.48■□□□□ 0.23
GABRB3-215ENST00000622697 FGFR3P22607 806 aa16.48■□□□□ 0.23
GABRB3-215ENST00000622697 PTDSS1P48651 473 aaKnown RBP16.48■□□□□ 0.23
GABRB3-215ENST00000622697 ACVR2BQ13705 512 aa16.48■□□□□ 0.23
GABRB3-215ENST00000622697 PARP6Q2NL67 630 aa16.48■□□□□ 0.23
GABRB3-215ENST00000622697 UGT3A1Q6NUS8 523 aa16.48■□□□□ 0.23
GABRB3-215ENST00000622697 RNF180Q86T96 592 aa16.48■□□□□ 0.23
GABRB3-215ENST00000622697 RIOX2Q8IUF8 465 aa16.48■□□□□ 0.23
GABRB3-215ENST00000622697 SLC41A1Q8IVJ1 513 aa16.48■□□□□ 0.23
GABRB3-215ENST00000622697 RIN3Q8TB24 985 aa16.48■□□□□ 0.23
GABRB3-215ENST00000622697 SENP8Q96LD8 212 aa16.48■□□□□ 0.23
GABRB3-215ENST00000622697 PPP1R10Q96QC0 940 aaKnown RBP16.48■□□□□ 0.23
GABRB3-215ENST00000622697 COLEC11Q9BWP8 271 aa16.48■□□□□ 0.23
GABRB3-215ENST00000622697 OR12D3Q9UGF7 316 aa16.48■□□□□ 0.23
GABRB3-215ENST00000622697 ACTL7BQ9Y614 415 aa16.48■□□□□ 0.23
GABRB3-215ENST00000622697 TMEM191CA6NGB0 347 aa16.48■□□□□ 0.23
GABRB3-215ENST00000622697 YDJCA8MPS7 323 aa16.48■□□□□ 0.23
GABRB3-215ENST00000622697 ABHD2P08910 425 aa16.48■□□□□ 0.23
GABRB3-215ENST00000622697 NPY2RP49146 381 aa16.48■□□□□ 0.23
GABRB3-215ENST00000622697 TBX4P57082 545 aa16.48■□□□□ 0.23
GABRB3-215ENST00000622697 PTPN20Q4JDL3 420 aa16.48■□□□□ 0.23
GABRB3-215ENST00000622697 PPP1R26Q5T8A7 1209 aaPredicted RBP16.48■□□□□ 0.23
GABRB3-215ENST00000622697 PIWIL2Q8TC59 973 aaKnown RBP16.48■□□□□ 0.23
GABRB3-215ENST00000622697 PCDHA11Q9Y5I1 949 aa16.48■□□□□ 0.23
GABRB3-215ENST00000622697 IGLV3-22A0A075B6J6 115 aa16.48■□□□□ 0.23
GABRB3-215ENST00000622697 CXCL11O14625 94 aa16.48■□□□□ 0.23
GABRB3-215ENST00000622697 CACHD1Q5VU97 1274 aa16.48■□□□□ 0.23
GABRB3-215ENST00000622697 OMDQ99983 421 aa16.48■□□□□ 0.23
GABRB3-215ENST00000622697 ZNF556Q9HAH1 456 aa16.48■□□□□ 0.23
GABRB3-215ENST00000622697 IL1RAPL1Q9NZN1 696 aa16.48■□□□□ 0.23
GABRB3-215ENST00000622697 PCDHB8Q9UN66 801 aa16.48■□□□□ 0.23
GABRB3-215ENST00000622697 HACD1B0YJ81 288 aa16.48■□□□□ 0.23
GABRB3-215ENST00000622697 PTPN1P18031 435 aaKnown RBP16.48■□□□□ 0.23
GABRB3-215ENST00000622697 CHRNB3Q05901 458 aa16.48■□□□□ 0.23
GABRB3-215ENST00000622697 OTUD3Q5T2D3 398 aaPredicted RBP16.48■□□□□ 0.23
GABRB3-215ENST00000622697 PIGZQ86VD9 579 aa16.48■□□□□ 0.23
GABRB3-215ENST00000622697 DDX28Q9NUL7 540 aaKnown RBP16.48■□□□□ 0.23
GABRB3-215ENST00000622697 VPS9D1Q9Y2B5 631 aa16.48■□□□□ 0.23
GABRB3-215ENST00000622697 BCL9LQ86UU0 1499 aa16.48■□□□□ 0.23
GABRB3-215ENST00000622697 CRTAMO95727 393 aa16.48■□□□□ 0.23
GABRB3-215ENST00000622697 CLK1P49759 484 aaKnown RBP16.48■□□□□ 0.23
GABRB3-215ENST00000622697 WNT8BQ93098 351 aa16.48■□□□□ 0.23
GABRB3-215ENST00000622697 MTFR1LQ9H019 292 aa16.48■□□□□ 0.23
GABRB3-215ENST00000622697 CLPBQ9H078 707 aa16.48■□□□□ 0.23
GABRB3-215ENST00000622697 ACSS3Q9H6R3 686 aa16.48■□□□□ 0.23
GABRB3-215ENST00000622697 LTN1O94822 1766 aa16.48■□□□□ 0.23
GABRB3-215ENST00000622697 RAMP2O60895 175 aa16.47■□□□□ 0.23
GABRB3-215ENST00000622697 TRPC1P48995 793 aa16.47■□□□□ 0.23
GABRB3-215ENST00000622697 NCALDP61601 193 aa16.47■□□□□ 0.23
GABRB3-215ENST00000622697 NR6A1Q15406 480 aa16.47■□□□□ 0.23
GABRB3-215ENST00000622697 P3H2Q8IVL5 708 aa16.47■□□□□ 0.23
GABRB3-215ENST00000622697 MICU2Q8IYU8 434 aa16.47■□□□□ 0.23
GABRB3-215ENST00000622697 PRDM12Q9H4Q4 367 aa16.47■□□□□ 0.23
GABRB3-215ENST00000622697 NFASCO94856 1347 aa16.47■□□□□ 0.23
GABRB3-215ENST00000622697 FAM95CA0A1B0GW59 222 aa16.47■□□□□ 0.23
GABRB3-215ENST00000622697 ALOX15BO15296 676 aa16.47■□□□□ 0.23
GABRB3-215ENST00000622697 PDGFDQ9GZP0 370 aaPredicted RBP16.47■□□□□ 0.23
GABRB3-215ENST00000622697 VTA1Q9NP79 307 aa16.47■□□□□ 0.23
GABRB3-215ENST00000622697 TRHDEQ9UKU6 1024 aa16.47■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms