RNA–Protein interactions for RNA: ENST00000620466.4

ALMS1-208, Transcript of ALMS1, centrosome and basal body associated protein, humanhuman

TSL 2

Gene ALMS1, Length 6,720 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1-208ENST00000620466 F5H5T6 163 aa8.53□□□□□ -1.04
ALMS1-208ENST00000620466 NDUFB5O43674 189 aa8.53□□□□□ -1.04
ALMS1-208ENST00000620466 TBC1D12O60347 775 aa8.53□□□□□ -1.04
ALMS1-208ENST00000620466 ACADMP11310 421 aa8.53□□□□□ -1.04
ALMS1-208ENST00000620466 CKBP12277 381 aa8.53□□□□□ -1.04
ALMS1-208ENST00000620466 CDH2P19022 906 aaPredicted RBP8.53□□□□□ -1.04
ALMS1-208ENST00000620466 SLC11A2P49281 568 aa8.53□□□□□ -1.04
ALMS1-208ENST00000620466 POU6F1Q14863 301 aa8.53□□□□□ -1.04
ALMS1-208ENST00000620466 ADRM1Q16186 407 aa8.53□□□□□ -1.04
ALMS1-208ENST00000620466 ZC3H12AQ5D1E8 599 aaKnown RBP8.53□□□□□ -1.04
ALMS1-208ENST00000620466 DCAF12L1Q5VU92 463 aa8.53□□□□□ -1.04
ALMS1-208ENST00000620466 CHMP1BQ7LBR1 199 aa8.53□□□□□ -1.04
ALMS1-208ENST00000620466 EFL1Q7Z2Z2 1120 aaKnown RBP8.53□□□□□ -1.04
ALMS1-208ENST00000620466 LRRC15Q8TF66 581 aa8.53□□□□□ -1.04
ALMS1-208ENST00000620466 ACSS3Q9H6R3 686 aa8.53□□□□□ -1.04
ALMS1-208ENST00000620466 VTI1BQ9UEU0 232 aa8.53□□□□□ -1.04
ALMS1-208ENST00000620466 FAM47E-STBD1D6RA91 191 aa8.53□□□□□ -1.04
ALMS1-208ENST00000620466 DCXO43602 365 aa8.53□□□□□ -1.04
ALMS1-208ENST00000620466 MAFO75444 373 aaPredicted RBP8.53□□□□□ -1.04
ALMS1-208ENST00000620466 LYPLA2O95372 231 aa8.53□□□□□ -1.04
ALMS1-208ENST00000620466 EGFRP00533 1210 aa8.53□□□□□ -1.04
ALMS1-208ENST00000620466 ERBB2P04626 1255 aa8.53□□□□□ -1.04
ALMS1-208ENST00000620466 SKIV2L2P42285 1042 aaKnown RBP8.53□□□□□ -1.04
ALMS1-208ENST00000620466 SLC25A3Q00325 362 aa8.53□□□□□ -1.04
ALMS1-208ENST00000620466 SLC35G1Q2M3R5 365 aa8.53□□□□□ -1.04
ALMS1-208ENST00000620466 OR6Y1Q8NGX8 325 aa8.53□□□□□ -1.04
ALMS1-208ENST00000620466 LRRC39Q96DD0 335 aa8.53□□□□□ -1.04
ALMS1-208ENST00000620466 MPP4Q96JB8 637 aa8.53□□□□□ -1.04
ALMS1-208ENST00000620466 ZNF333Q96JL9 665 aa8.53□□□□□ -1.04
ALMS1-208ENST00000620466 RNF157Q96PX1 679 aa8.53□□□□□ -1.04
ALMS1-208ENST00000620466 SETD4Q9NVD3 440 aa8.53□□□□□ -1.04
ALMS1-208ENST00000620466 DDX43Q9NXZ2 648 aaKnown RBP8.53□□□□□ -1.04
ALMS1-208ENST00000620466 CFAP99D6REC4 459 aa8.52□□□□□ -1.04
ALMS1-208ENST00000620466 PRR23D1E9PI22 279 aaPredicted RBP8.52□□□□□ -1.04
ALMS1-208ENST00000620466 GOLGA8TH3BQL2 631 aa8.52□□□□□ -1.04
ALMS1-208ENST00000620466 PLA2G6O60733 806 aa8.52□□□□□ -1.04
ALMS1-208ENST00000620466 TRIM13O60858 407 aa8.52□□□□□ -1.04
ALMS1-208ENST00000620466 FAM58BPP0C7Q3 252 aa8.52□□□□□ -1.04
ALMS1-208ENST00000620466 PRR23D2P0DMB1 279 aaPredicted RBP8.52□□□□□ -1.04
ALMS1-208ENST00000620466 NPY2RP49146 381 aa8.52□□□□□ -1.04
ALMS1-208ENST00000620466 MMP14P50281 582 aa8.52□□□□□ -1.04
ALMS1-208ENST00000620466 PRKAA1Q13131 559 aa8.52□□□□□ -1.04
ALMS1-208ENST00000620466 POLD3Q15054 466 aaPredicted RBP8.52□□□□□ -1.04
ALMS1-208ENST00000620466 AGKQ53H12 422 aa8.52□□□□□ -1.04
ALMS1-208ENST00000620466 GNASQ5JWF2 1037 aa8.52□□□□□ -1.04
ALMS1-208ENST00000620466 FKBP1CQ5VVH2 108 aa8.52□□□□□ -1.04
ALMS1-208ENST00000620466 ERAP2Q6P179 960 aa8.52□□□□□ -1.04
ALMS1-208ENST00000620466 POLNQ7Z5Q5 900 aa8.52□□□□□ -1.04
ALMS1-208ENST00000620466 SNX32Q86XE0 403 aa8.52□□□□□ -1.04
ALMS1-208ENST00000620466 SLC2A14Q8TDB8 520 aa8.52□□□□□ -1.04
ALMS1-208ENST00000620466 EDEM1Q92611 657 aa8.52□□□□□ -1.04
ALMS1-208ENST00000620466 TBL1YQ9BQ87 522 aa8.52□□□□□ -1.04
ALMS1-208ENST00000620466 UBXN6Q9BZV1 441 aa8.52□□□□□ -1.04
ALMS1-208ENST00000620466 BRD8Q9H0E9 1235 aa8.52□□□□□ -1.04
ALMS1-208ENST00000620466 NCKIPSDQ9NZQ3 722 aa8.52□□□□□ -1.04
ALMS1-208ENST00000620466 UBDO15205 165 aa8.52□□□□□ -1.05
ALMS1-208ENST00000620466 NCAM2O15394 837 aa8.52□□□□□ -1.05
ALMS1-208ENST00000620466 STRNO43815 780 aa8.52□□□□□ -1.05
ALMS1-208ENST00000620466 SOAT2O75908 522 aa8.52□□□□□ -1.05
ALMS1-208ENST00000620466 USP1O94782 785 aa8.52□□□□□ -1.05
ALMS1-208ENST00000620466 SNUPNO95149 360 aaKnown RBP8.52□□□□□ -1.05
ALMS1-208ENST00000620466 ASS1P00966 412 aaKnown RBP8.52□□□□□ -1.05
ALMS1-208ENST00000620466 NUMBP49757 651 aa8.52□□□□□ -1.05
ALMS1-208ENST00000620466 POU4F1Q01851 419 aa8.52□□□□□ -1.05
ALMS1-208ENST00000620466 CDH17Q12864 832 aa8.52□□□□□ -1.05
ALMS1-208ENST00000620466 GALNTL6Q49A17 601 aa8.52□□□□□ -1.05
ALMS1-208ENST00000620466 HERC6Q8IVU3 1022 aa8.52□□□□□ -1.05
ALMS1-208ENST00000620466 ADAM32Q8TC27 787 aa8.52□□□□□ -1.05
ALMS1-208ENST00000620466 FAM136AQ96C01 138 aa8.52□□□□□ -1.05
ALMS1-208ENST00000620466 HIC2Q96JB3 615 aa8.52□□□□□ -1.05
ALMS1-208ENST00000620466 MECRQ9BV79 373 aa8.52□□□□□ -1.05
ALMS1-208ENST00000620466 SNRNP25Q9BV90 132 aaKnown RBP8.52□□□□□ -1.05
ALMS1-208ENST00000620466 OSBPL7Q9BZF2 842 aa8.52□□□□□ -1.05
ALMS1-208ENST00000620466 BCAS3Q9H6U6 928 aa8.52□□□□□ -1.05
ALMS1-208ENST00000620466 GPAMQ9HCL2 828 aa8.52□□□□□ -1.05
ALMS1-208ENST00000620466 RHBDL2Q9NX52 303 aa8.52□□□□□ -1.05
ALMS1-208ENST00000620466 NFKBIL1Q9UBC1 381 aaPredicted RBP8.52□□□□□ -1.05
ALMS1-208ENST00000620466 NOCTQ9UK39 431 aaKnown RBP8.52□□□□□ -1.05
ALMS1-208ENST00000620466 ATP11BQ9Y2G3 1177 aa8.52□□□□□ -1.05
ALMS1-208ENST00000620466 COL14A1Q05707 1796 aaKnown RBP8.52□□□□□ -1.05
ALMS1-208ENST00000620466 LRP6O75581 1613 aa8.52□□□□□ -1.05
ALMS1-208ENST00000620466 TMEM191CA6NGB0 347 aa8.52□□□□□ -1.05
ALMS1-208ENST00000620466 PCNAP12004 261 aa8.52□□□□□ -1.05
ALMS1-208ENST00000620466 TCF3P15923 654 aa8.52□□□□□ -1.05
ALMS1-208ENST00000620466 PSMB4P28070 264 aa8.52□□□□□ -1.05
ALMS1-208ENST00000620466 MLH1P40692 756 aa8.52□□□□□ -1.05
ALMS1-208ENST00000620466 BNIP1Q12981 228 aa8.52□□□□□ -1.05
ALMS1-208ENST00000620466 CCDC142Q17RM4 750 aa8.52□□□□□ -1.05
ALMS1-208ENST00000620466 PTAR1Q7Z6K3 402 aaPredicted RBP8.52□□□□□ -1.05
ALMS1-208ENST00000620466 ECHDC2Q86YB7 292 aa8.52□□□□□ -1.05
ALMS1-208ENST00000620466 JOSD2Q8TAC2 188 aa8.52□□□□□ -1.05
ALMS1-208ENST00000620466 TMEM109Q9BVC6 243 aa8.52□□□□□ -1.05
ALMS1-208ENST00000620466 ALBP02768 609 aa8.52□□□□□ -1.05
ALMS1-208ENST00000620466 RBP1P09455 135 aa8.52□□□□□ -1.05
ALMS1-208ENST00000620466 ANPEPP15144 967 aa8.52□□□□□ -1.05
ALMS1-208ENST00000620466 CATSPERGQ6ZRH7 1159 aa8.52□□□□□ -1.05
ALMS1-208ENST00000620466 BBS12Q6ZW61 710 aa8.52□□□□□ -1.05
ALMS1-208ENST00000620466 APBA2Q99767 749 aa8.52□□□□□ -1.05
ALMS1-208ENST00000620466 TMEM79Q9BSE2 394 aa8.52□□□□□ -1.05
ALMS1-208ENST00000620466 POMKQ9H5K3 350 aa8.52□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms