RNA–Protein interactions for RNA: ENST00000619035.4

TNFAIP3-209, Transcript of TNF alpha induced protein 3, humanhuman

TSL 5 BASIC

Gene TNFAIP3, Length 2,267 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3-209ENST00000619035 VPS52Q8N1B4 723 aa13.07□□□□□ -0.32
TNFAIP3-209ENST00000619035 MGARPQ8TDB4 240 aa13.07□□□□□ -0.32
TNFAIP3-209ENST00000619035 DEPDC1BQ8WUY9 529 aa13.07□□□□□ -0.32
TNFAIP3-209ENST00000619035 HAPLN3Q96S86 360 aa13.07□□□□□ -0.32
TNFAIP3-209ENST00000619035 FERMT1Q9BQL6 677 aa13.07□□□□□ -0.32
TNFAIP3-209ENST00000619035 OSBPL2Q9H1P3 480 aa13.07□□□□□ -0.32
TNFAIP3-209ENST00000619035 CCSER2Q9H7U1 834 aa13.07□□□□□ -0.32
TNFAIP3-209ENST00000619035 VPS37BQ9H9H4 285 aa13.07□□□□□ -0.32
TNFAIP3-209ENST00000619035 ETNK1Q9HBU6 452 aa13.07□□□□□ -0.32
TNFAIP3-209ENST00000619035 MTPAPQ9NVV4 582 aaKnown RBP eCLIP13.07□□□□□ -0.32
TNFAIP3-209ENST00000619035 AFF4Q9UHB7 1163 aaKnown RBP13.07□□□□□ -0.32
TNFAIP3-209ENST00000619035 MAFFQ9ULX9 164 aa13.07□□□□□ -0.32
TNFAIP3-209ENST00000619035 KCNK1O00180 336 aa13.06□□□□□ -0.32
TNFAIP3-209ENST00000619035 RNF103O00237 685 aa13.06□□□□□ -0.32
TNFAIP3-209ENST00000619035 GCATO75600 419 aa13.06□□□□□ -0.32
TNFAIP3-209ENST00000619035 STK10O94804 968 aaKnown RBP13.06□□□□□ -0.32
TNFAIP3-209ENST00000619035 SERPINB6P35237 376 aa13.06□□□□□ -0.32
TNFAIP3-209ENST00000619035 LRRC14Q15048 493 aa13.06□□□□□ -0.32
TNFAIP3-209ENST00000619035 PRKD1Q15139 912 aaPredicted RBP13.06□□□□□ -0.32
TNFAIP3-209ENST00000619035 ANKRD20A2Q5SQ80 823 aa13.06□□□□□ -0.32
TNFAIP3-209ENST00000619035 ANKRD20A1Q5TYW2 823 aa13.06□□□□□ -0.32
TNFAIP3-209ENST00000619035 ANKRD20A3Q5VUR7 823 aa13.06□□□□□ -0.32
TNFAIP3-209ENST00000619035 MSANTD2Q6P1R3 559 aa13.06□□□□□ -0.32
TNFAIP3-209ENST00000619035 C16orf59Q7L2K0 433 aa13.06□□□□□ -0.32
TNFAIP3-209ENST00000619035 RELL1Q8IUW5 271 aa13.06□□□□□ -0.32
TNFAIP3-209ENST00000619035 PDIK1LQ8N165 341 aa13.06□□□□□ -0.32
TNFAIP3-209ENST00000619035 ZNF461Q8TAF7 563 aa13.06□□□□□ -0.32
TNFAIP3-209ENST00000619035 BADQ92934 168 aa13.06□□□□□ -0.32
TNFAIP3-209ENST00000619035 ARHGEF2Q92974 986 aaKnown RBP13.06□□□□□ -0.32
TNFAIP3-209ENST00000619035 ZNF512Q96ME7 567 aaPredicted RBP13.06□□□□□ -0.32
TNFAIP3-209ENST00000619035 ZBED2Q9BTP6 218 aa13.06□□□□□ -0.32
TNFAIP3-209ENST00000619035 ROPN1BQ9BZX4 212 aaPredicted RBP13.06□□□□□ -0.32
TNFAIP3-209ENST00000619035 ROPN1Q9HAT0 212 aaPredicted RBP13.06□□□□□ -0.32
TNFAIP3-209ENST00000619035 CLIC5Q9NZA1 410 aa13.06□□□□□ -0.32
TNFAIP3-209ENST00000619035 MARCH2Q9P0N8 246 aa13.06□□□□□ -0.32
TNFAIP3-209ENST00000619035 HS3ST4Q9Y661 456 aa13.06□□□□□ -0.32
TNFAIP3-209ENST00000619035 C5orf60A6NFR6 353 aa13.06□□□□□ -0.32
TNFAIP3-209ENST00000619035 A6NNZ2 444 aa13.06□□□□□ -0.32
TNFAIP3-209ENST00000619035 POC1B-GALNT4F8VUJ3 575 aa13.06□□□□□ -0.32
TNFAIP3-209ENST00000619035 CHADO15335 359 aa13.06□□□□□ -0.32
TNFAIP3-209ENST00000619035 TLR5O60602 858 aa13.06□□□□□ -0.32
TNFAIP3-209ENST00000619035 CSPG5O95196 566 aa13.06□□□□□ -0.32
TNFAIP3-209ENST00000619035 APOEP02649 317 aa13.06□□□□□ -0.32
TNFAIP3-209ENST00000619035 FGBP02675 491 aa13.06□□□□□ -0.32
TNFAIP3-209ENST00000619035 HTR7P34969 479 aa13.06□□□□□ -0.32
TNFAIP3-209ENST00000619035 IFNAR2P48551 515 aa13.06□□□□□ -0.32
TNFAIP3-209ENST00000619035 TUBB8Q3ZCM7 444 aa13.06□□□□□ -0.32
TNFAIP3-209ENST00000619035 SERPINB12Q96P63 405 aa13.06□□□□□ -0.32
TNFAIP3-209ENST00000619035 WDR83Q9BRX9 315 aaKnown RBP13.06□□□□□ -0.32
TNFAIP3-209ENST00000619035 OLA1Q9NTK5 396 aaKnown RBP13.06□□□□□ -0.32
TNFAIP3-209ENST00000619035 A0A0A0MRY4 1105 aa13.05□□□□□ -0.32
TNFAIP3-209ENST00000619035 SLC12A8A0AV02 714 aa13.05□□□□□ -0.32
TNFAIP3-209ENST00000619035 GMNCA6NCL1 334 aa13.05□□□□□ -0.32
TNFAIP3-209ENST00000619035 KCNU1A8MYU2 1149 aa13.05□□□□□ -0.32
TNFAIP3-209ENST00000619035 SMAPO00193 183 aa13.05□□□□□ -0.32
TNFAIP3-209ENST00000619035 AVILO75366 819 aa13.05□□□□□ -0.32
TNFAIP3-209ENST00000619035 SLC2A3P11169 496 aa13.05□□□□□ -0.32
TNFAIP3-209ENST00000619035 HTRA4P83105 476 aaPredicted RBP13.05□□□□□ -0.32
TNFAIP3-209ENST00000619035 CREMQ03060 361 aa13.05□□□□□ -0.32
TNFAIP3-209ENST00000619035 TAF12Q16514 161 aa13.05□□□□□ -0.32
TNFAIP3-209ENST00000619035 C4orf22Q6V702 233 aa13.05□□□□□ -0.32
TNFAIP3-209ENST00000619035 ZNF276Q8N554 614 aa13.05□□□□□ -0.32
TNFAIP3-209ENST00000619035 FBXO36Q8NEA4 188 aa13.05□□□□□ -0.32
TNFAIP3-209ENST00000619035 PYROXD1Q8WU10 500 aa13.05□□□□□ -0.32
TNFAIP3-209ENST00000619035 ATXN2LQ8WWM7 1075 aaKnown RBP13.05□□□□□ -0.32
TNFAIP3-209ENST00000619035 TBC1D31Q96DN5 1066 aa13.05□□□□□ -0.32
TNFAIP3-209ENST00000619035 SPATA13Q96N96 652 aa13.05□□□□□ -0.32
TNFAIP3-209ENST00000619035 TTC25Q96NG3 672 aa13.05□□□□□ -0.32
TNFAIP3-209ENST00000619035 XPO6Q96QU8 1125 aaKnown RBP13.05□□□□□ -0.32
TNFAIP3-209ENST00000619035 PRMT1Q99873 361 aaKnown RBP13.05□□□□□ -0.32
TNFAIP3-209ENST00000619035 MCOLN1Q9GZU1 580 aa13.05□□□□□ -0.32
TNFAIP3-209ENST00000619035 NACA2Q9H009 215 aa13.05□□□□□ -0.32
TNFAIP3-209ENST00000619035 MPP6Q9NZW5 540 aa13.05□□□□□ -0.32
TNFAIP3-209ENST00000619035 NEU3Q9UQ49 428 aa13.05□□□□□ -0.32
TNFAIP3-209ENST00000619035 SSX2IPQ9Y2D8 614 aa13.05□□□□□ -0.32
TNFAIP3-209ENST00000619035 RAD54BQ9Y620 910 aa13.05□□□□□ -0.32
TNFAIP3-209ENST00000619035 GREB1Q4ZG55 1949 aa13.05□□□□□ -0.32
TNFAIP3-209ENST00000619035 E9PAM4 449 aa13.05□□□□□ -0.32
TNFAIP3-209ENST00000619035 DFFAO00273 331 aa13.05□□□□□ -0.32
TNFAIP3-209ENST00000619035 PRRG1O14668 218 aa13.05□□□□□ -0.32
TNFAIP3-209ENST00000619035 ALOX15BO15296 676 aa13.05□□□□□ -0.32
TNFAIP3-209ENST00000619035 GCAP28676 217 aa13.05□□□□□ -0.32
TNFAIP3-209ENST00000619035 SSTR1P30872 391 aa13.05□□□□□ -0.32
TNFAIP3-209ENST00000619035 ALDH1A3P47895 512 aa13.05□□□□□ -0.32
TNFAIP3-209ENST00000619035 TUBP50607 506 aa13.05□□□□□ -0.32
TNFAIP3-209ENST00000619035 FPGSQ05932 587 aa13.05□□□□□ -0.32
TNFAIP3-209ENST00000619035 MTA1Q13330 715 aa13.05□□□□□ -0.32
TNFAIP3-209ENST00000619035 EFTUD2Q15029 972 aaKnown RBP eCLIP13.05□□□□□ -0.326e-6■■□□□ 13.1
TNFAIP3-209ENST00000619035 TMED2Q15363 201 aa13.05□□□□□ -0.32
TNFAIP3-209ENST00000619035 ACBD5Q5T8D3 534 aaPredicted RBP13.05□□□□□ -0.32
TNFAIP3-209ENST00000619035 PIK3R6Q5UE93 754 aa13.05□□□□□ -0.32
TNFAIP3-209ENST00000619035 PSRC1Q6PGN9 363 aaPredicted RBP13.05□□□□□ -0.32
TNFAIP3-209ENST00000619035 C14orf80Q86SX3 495 aa13.05□□□□□ -0.32
TNFAIP3-209ENST00000619035 ANKRD42Q8N9B4 389 aa13.05□□□□□ -0.32
TNFAIP3-209ENST00000619035 SLC39A13Q96H72 371 aa13.05□□□□□ -0.32
TNFAIP3-209ENST00000619035 CNOT10Q9H9A5 744 aaKnown RBP13.05□□□□□ -0.32
TNFAIP3-209ENST00000619035 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP13.05□□□□□ -0.32
TNFAIP3-209ENST00000619035 MRPL17Q9NRX2 175 aaKnown RBP13.05□□□□□ -0.32
TNFAIP3-209ENST00000619035 CXXC1Q9P0U4 656 aaPredicted RBP13.05□□□□□ -0.32
TNFAIP3-209ENST00000619035 VANGL2Q9ULK5 521 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms