RNA–Protein interactions for RNA: ENST00000618500.4

SNCA-213, Transcript of synuclein alpha, humanhuman

TSL 1 (best) BASIC

Gene SNCA, Length 3,022 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-213ENST00000618500 FIBINQ8TAL6 211 aa4.78□□□□□ -1.64
SNCA-213ENST00000618500 SNX19Q92543 992 aa4.78□□□□□ -1.64
SNCA-213ENST00000618500 NAT6Q93015 286 aa4.78□□□□□ -1.64
SNCA-213ENST00000618500 LENG8Q96PV6 779 aaPredicted RBP4.78□□□□□ -1.64
SNCA-213ENST00000618500 BACH2Q9BYV9 841 aa4.78□□□□□ -1.64
SNCA-213ENST00000618500 SLC25A18Q9H1K4 315 aa4.78□□□□□ -1.64
SNCA-213ENST00000618500 KRT82Q9NSB4 513 aa4.78□□□□□ -1.64
SNCA-213ENST00000618500 BOLA1Q9Y3E2 137 aa4.78□□□□□ -1.64
SNCA-213ENST00000618500 R3HCC1Q9Y3T6 440 aaKnown RBP4.78□□□□□ -1.64
SNCA-213ENST00000618500 KIF3AQ9Y496 699 aa4.78□□□□□ -1.64
SNCA-213ENST00000618500 HS3ST3A1Q9Y663 406 aa4.78□□□□□ -1.64
SNCA-213ENST00000618500 LRRK1Q38SD2 2015 aa4.77□□□□□ -1.65
SNCA-213ENST00000618500 CNOT1A5YKK6 2376 aaKnown RBP4.77□□□□□ -1.65
SNCA-213ENST00000618500 A0A1W2PNU3 283 aaPredicted RBP4.77□□□□□ -1.65
SNCA-213ENST00000618500 A0A1W2PQ27 194 aa4.77□□□□□ -1.65
SNCA-213ENST00000618500 A0A1W2PQ64 194 aa4.77□□□□□ -1.65
SNCA-213ENST00000618500 A0A1W2PQC6 194 aa4.77□□□□□ -1.65
SNCA-213ENST00000618500 A8MXQ7 604 aa4.77□□□□□ -1.65
SNCA-213ENST00000618500 WASH3PC4AMC7 463 aa4.77□□□□□ -1.65
SNCA-213ENST00000618500 NOBOXO60393 691 aa4.77□□□□□ -1.65
SNCA-213ENST00000618500 IL9RQ01113 521 aa4.77□□□□□ -1.65
SNCA-213ENST00000618500 NCEH1Q6PIU2 408 aa4.77□□□□□ -1.65
SNCA-213ENST00000618500 CLEC20AQ6ZU45 233 aa4.77□□□□□ -1.65
SNCA-213ENST00000618500 CHST9Q7L1S5 443 aa4.77□□□□□ -1.65
SNCA-213ENST00000618500 SLC25A45Q8N413 288 aa4.77□□□□□ -1.65
SNCA-213ENST00000618500 ZSCAN1Q8NBB4 408 aa4.77□□□□□ -1.65
SNCA-213ENST00000618500 OR6C4Q8NGE1 309 aa4.77□□□□□ -1.65
SNCA-213ENST00000618500 OR6B3Q8NGW1 331 aa4.77□□□□□ -1.65
SNCA-213ENST00000618500 SCAMP5Q8TAC9 235 aa4.77□□□□□ -1.65
SNCA-213ENST00000618500 GLMNQ92990 594 aa4.77□□□□□ -1.65
SNCA-213ENST00000618500 DDX50Q9BQ39 737 aaKnown RBP4.77□□□□□ -1.65
SNCA-213ENST00000618500 LRRC27Q9C0I9 530 aa4.77□□□□□ -1.65
SNCA-213ENST00000618500 NACA2Q9H009 215 aa4.77□□□□□ -1.65
SNCA-213ENST00000618500 CDH19Q9H159 772 aa4.77□□□□□ -1.65
SNCA-213ENST00000618500 TMEM51Q9NW97 253 aa4.77□□□□□ -1.65
SNCA-213ENST00000618500 SEPT10Q9P0V9 454 aa4.77□□□□□ -1.65
SNCA-213ENST00000618500 STRIP2Q9ULQ0 834 aa4.77□□□□□ -1.65
SNCA-213ENST00000618500 PLA2G4CQ9UP65 541 aa4.77□□□□□ -1.65
SNCA-213ENST00000618500 SATB2Q9UPW6 733 aa4.77□□□□□ -1.65
SNCA-213ENST00000618500 A0A1B0GVM2 712 aa4.77□□□□□ -1.65
SNCA-213ENST00000618500 EME2A4GXA9 379 aaPredicted RBP4.77□□□□□ -1.65
SNCA-213ENST00000618500 VWA3AA6NCI4 1184 aa4.77□□□□□ -1.65
SNCA-213ENST00000618500 TISP43B9A030 160 aa4.77□□□□□ -1.65
SNCA-213ENST00000618500 CAPN5O15484 640 aaPredicted RBP4.77□□□□□ -1.65
SNCA-213ENST00000618500 CYP26A1O43174 497 aa4.77□□□□□ -1.65
SNCA-213ENST00000618500 IRF1P10914 325 aa4.77□□□□□ -1.65
SNCA-213ENST00000618500 DGKAP23743 735 aa4.77□□□□□ -1.65
SNCA-213ENST00000618500 HLA-FP30511 346 aa4.77□□□□□ -1.65
SNCA-213ENST00000618500 ARID5AQ03989 594 aa4.77□□□□□ -1.65
SNCA-213ENST00000618500 KCNMA1Q12791 1236 aa4.77□□□□□ -1.65
SNCA-213ENST00000618500 NR0B2Q15466 257 aa4.77□□□□□ -1.65
SNCA-213ENST00000618500 NFIL3Q16649 462 aa4.77□□□□□ -1.65
SNCA-213ENST00000618500 TTC39BQ5VTQ0 682 aaPredicted RBP4.77□□□□□ -1.65
SNCA-213ENST00000618500 MBLAC2Q68D91 279 aa4.77□□□□□ -1.65
SNCA-213ENST00000618500 ARHGAP17Q68EM7 881 aa4.77□□□□□ -1.65
SNCA-213ENST00000618500 DTX1Q86Y01 620 aa4.77□□□□□ -1.65
SNCA-213ENST00000618500 GATAD2AQ86YP4 633 aa4.77□□□□□ -1.65
SNCA-213ENST00000618500 SLC9A9Q8IVB4 645 aa4.77□□□□□ -1.65
SNCA-213ENST00000618500 ZC3H3Q8IXZ2 948 aaKnown RBP4.77□□□□□ -1.65
SNCA-213ENST00000618500 DENND6BQ8NEG7 585 aa4.77□□□□□ -1.65
SNCA-213ENST00000618500 IFI44Q8TCB0 444 aa4.77□□□□□ -1.65
SNCA-213ENST00000618500 ZNF507Q8TCN5 953 aa4.77□□□□□ -1.65
SNCA-213ENST00000618500 BTN2A2Q8WVV5 523 aa4.77□□□□□ -1.65
SNCA-213ENST00000618500 IRGQQ8WZA9 623 aa4.77□□□□□ -1.65
SNCA-213ENST00000618500 GZF1Q9H116 711 aaPredicted RBP4.77□□□□□ -1.65
SNCA-213ENST00000618500 CUEDC2Q9H467 287 aa4.77□□□□□ -1.65
SNCA-213ENST00000618500 NMUR1Q9HB89 426 aa4.77□□□□□ -1.65
SNCA-213ENST00000618500 PDE11AQ9HCR9 933 aa4.77□□□□□ -1.65
SNCA-213ENST00000618500 LIMCH1Q9UPQ0 1083 aa4.77□□□□□ -1.65
SNCA-213ENST00000618500 COL6A6A6NMZ7 2263 aa4.76□□□□□ -1.65
SNCA-213ENST00000618500 A0A1W2PQH9 124 aa4.76□□□□□ -1.65
SNCA-213ENST00000618500 NEMP2A6NFY4 417 aa4.76□□□□□ -1.65
SNCA-213ENST00000618500 H3BM21 787 aa4.76□□□□□ -1.65
SNCA-213ENST00000618500 KRT19P08727 400 aa4.76□□□□□ -1.65
SNCA-213ENST00000618500 NME1P15531 152 aaKnown RBP4.76□□□□□ -1.65
SNCA-213ENST00000618500 POLR2EP19388 210 aaKnown RBP4.76□□□□□ -1.65
SNCA-213ENST00000618500 MZF1P28698 734 aaPredicted RBP4.76□□□□□ -1.65
SNCA-213ENST00000618500 RPIAP49247 311 aa4.76□□□□□ -1.65
SNCA-213ENST00000618500 PDX1P52945 283 aa4.76□□□□□ -1.65
SNCA-213ENST00000618500 SULT2A1Q06520 285 aa4.76□□□□□ -1.65
SNCA-213ENST00000618500 NFATC3Q12968 1075 aa4.76□□□□□ -1.65
SNCA-213ENST00000618500 DHX8Q14562 1220 aaKnown RBP4.76□□□□□ -1.65
SNCA-213ENST00000618500 MCM6Q14566 821 aa4.76□□□□□ -1.65
SNCA-213ENST00000618500 ELAVL3Q14576 367 aaKnown RBP4.76□□□□□ -1.65
SNCA-213ENST00000618500 KDM7AQ6ZMT4 941 aa4.76□□□□□ -1.65
SNCA-213ENST00000618500 TPGS1Q6ZTW0 290 aa4.76□□□□□ -1.65
SNCA-213ENST00000618500 HS2ST1Q7LGA3 356 aa4.76□□□□□ -1.65
SNCA-213ENST00000618500 BHLHA9Q7RTU4 235 aa4.76□□□□□ -1.65
SNCA-213ENST00000618500 DSG4Q86SJ6 1040 aa4.76□□□□□ -1.65
SNCA-213ENST00000618500 AADATQ8N5Z0 425 aa4.76□□□□□ -1.65
SNCA-213ENST00000618500 HJURPQ8NCD3 748 aaPredicted RBP4.76□□□□□ -1.65
SNCA-213ENST00000618500 GOLGA5Q8TBA6 731 aa4.76□□□□□ -1.65
SNCA-213ENST00000618500 SERAC1Q96JX3 654 aa4.76□□□□□ -1.65
SNCA-213ENST00000618500 FAM129BQ96TA1 746 aa4.76□□□□□ -1.65
SNCA-213ENST00000618500 MAGEF1Q9HAY2 307 aa4.76□□□□□ -1.65
SNCA-213ENST00000618500 FBXL12Q9NXK8 326 aa4.76□□□□□ -1.65
SNCA-213ENST00000618500 CLDN5O00501 218 aa4.76□□□□□ -1.65
SNCA-213ENST00000618500 PDGFRBP09619 1106 aa4.76□□□□□ -1.65
SNCA-213ENST00000618500 CCDC15Q0P6D6 951 aa4.76□□□□□ -1.65
SNCA-213ENST00000618500 KCNAB2Q13303 367 aa4.76□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms