RNA–Protein interactions for RNA: ENST00000617904.4

TRAPPC3-210, Transcript of trafficking protein particle complex 3, humanhuman

TSL 2 BASIC

Gene TRAPPC3, Length 1,305 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-210ENST00000617904 LRG1P02750 347 aa17.3■□□□□ 0.36
TRAPPC3-210ENST00000617904 RPL17P18621 184 aaKnown RBP17.3■□□□□ 0.36
TRAPPC3-210ENST00000617904 EPHB2P29323 1055 aa17.3■□□□□ 0.36
TRAPPC3-210ENST00000617904 GPS1Q13098 491 aa17.3■□□□□ 0.36
TRAPPC3-210ENST00000617904 MORF4L2Q15014 288 aa17.3■□□□□ 0.36
TRAPPC3-210ENST00000617904 RAB6CQ53S08 254 aa17.3■□□□□ 0.36
TRAPPC3-210ENST00000617904 SLC45A4Q5BKX6 768 aa17.3■□□□□ 0.36
TRAPPC3-210ENST00000617904 OTUD1Q5VV17 481 aaPredicted RBP17.3■□□□□ 0.36
TRAPPC3-210ENST00000617904 IZUMO3Q5VZ72 239 aa17.3■□□□□ 0.36
TRAPPC3-210ENST00000617904 ANKS1BQ7Z6G8 1248 aa17.3■□□□□ 0.36
TRAPPC3-210ENST00000617904 ALYREFQ86V81 257 aaKnown RBP17.3■□□□□ 0.36
TRAPPC3-210ENST00000617904 ZC3H18Q86VM9 953 aaKnown RBP17.3■□□□□ 0.36
TRAPPC3-210ENST00000617904 DDX42Q86XP3 938 aaKnown RBP eCLIP17.3■□□□□ 0.36
TRAPPC3-210ENST00000617904 GSPT2Q8IYD1 628 aaKnown RBP17.3■□□□□ 0.36
TRAPPC3-210ENST00000617904 TBC1D31Q96DN5 1066 aa17.3■□□□□ 0.36
TRAPPC3-210ENST00000617904 C1orf74Q96LT6 269 aa17.3■□□□□ 0.36
TRAPPC3-210ENST00000617904 TCF25Q9BQ70 676 aa17.3■□□□□ 0.36
TRAPPC3-210ENST00000617904 TMEM121Q9BTD3 319 aa17.3■□□□□ 0.36
TRAPPC3-210ENST00000617904 RAB6CQ9H0N0 254 aa17.3■□□□□ 0.36
TRAPPC3-210ENST00000617904 ZBP1Q9H171 429 aa17.3■□□□□ 0.36
TRAPPC3-210ENST00000617904 S1PR5Q9H228 398 aa17.3■□□□□ 0.36
TRAPPC3-210ENST00000617904 MED4Q9NPJ6 270 aa17.3■□□□□ 0.36
TRAPPC3-210ENST00000617904 ENTPD7Q9NQZ7 604 aa17.3■□□□□ 0.36
TRAPPC3-210ENST00000617904 MARCH2Q9P0N8 246 aa17.3■□□□□ 0.36
TRAPPC3-210ENST00000617904 DNMT3LQ9UJW3 386 aa17.3■□□□□ 0.36
TRAPPC3-210ENST00000617904 YIPF1Q9Y548 306 aa17.3■□□□□ 0.36
TRAPPC3-210ENST00000617904 VWA8A3KMH1 1905 aa17.3■□□□□ 0.36
TRAPPC3-210ENST00000617904 HIDE1A8MVS5 230 aa17.29■□□□□ 0.36
TRAPPC3-210ENST00000617904 DNALI1O14645 258 aaPredicted RBP17.29■□□□□ 0.36
TRAPPC3-210ENST00000617904 MAP2K7O14733 419 aa17.29■□□□□ 0.36
TRAPPC3-210ENST00000617904 KCNN4O15554 427 aa17.29■□□□□ 0.36
TRAPPC3-210ENST00000617904 C1RP00736 705 aa17.29■□□□□ 0.36
TRAPPC3-210ENST00000617904 MYBL2P10244 700 aa17.29■□□□□ 0.36
TRAPPC3-210ENST00000617904 AMPD1P23109 780 aa17.29■□□□□ 0.36
TRAPPC3-210ENST00000617904 IL4RP24394 825 aa17.29■□□□□ 0.36
TRAPPC3-210ENST00000617904 HSPA9P38646 679 aaKnown RBP17.29■□□□□ 0.36
TRAPPC3-210ENST00000617904 TUBP50607 506 aa17.29■□□□□ 0.36
TRAPPC3-210ENST00000617904 PITX1P78337 314 aaPredicted RBP17.29■□□□□ 0.36
TRAPPC3-210ENST00000617904 NRG1Q02297 640 aaPredicted RBP17.29■□□□□ 0.36
TRAPPC3-210ENST00000617904 NHLH1Q02575 133 aa17.29■□□□□ 0.36
TRAPPC3-210ENST00000617904 ADCY2Q08462 1091 aa17.29■□□□□ 0.36
TRAPPC3-210ENST00000617904 EFEMP1Q12805 493 aa17.29■□□□□ 0.36
TRAPPC3-210ENST00000617904 PAFAH1B3Q15102 231 aaKnown RBP17.29■□□□□ 0.36
TRAPPC3-210ENST00000617904 P3H1Q32P28 736 aa17.29■□□□□ 0.36
TRAPPC3-210ENST00000617904 HECTD3Q5T447 861 aa17.29■□□□□ 0.36
TRAPPC3-210ENST00000617904 BMP8AQ7Z5Y6 402 aa17.29■□□□□ 0.36
TRAPPC3-210ENST00000617904 PQLC3Q8N755 202 aa17.29■□□□□ 0.36
TRAPPC3-210ENST00000617904 CASP10Q92851 521 aa17.29■□□□□ 0.36
TRAPPC3-210ENST00000617904 BTN2A3PQ96KV6 586 aa17.29■□□□□ 0.36
TRAPPC3-210ENST00000617904 GCNAQ96QF7 691 aa17.29■□□□□ 0.36
TRAPPC3-210ENST00000617904 FAM118BQ9BPY3 351 aa17.29■□□□□ 0.36
TRAPPC3-210ENST00000617904 DDX50Q9BQ39 737 aaKnown RBP17.29■□□□□ 0.36
TRAPPC3-210ENST00000617904 VN1R3Q9BXE9 311 aa17.29■□□□□ 0.36
TRAPPC3-210ENST00000617904 KLC2Q9H0B6 622 aa17.29■□□□□ 0.36
TRAPPC3-210ENST00000617904 NMUR1Q9HB89 426 aa17.29■□□□□ 0.36
TRAPPC3-210ENST00000617904 ARHGEF4Q9NR80 690 aa17.29■□□□□ 0.36
TRAPPC3-210ENST00000617904 ZNF446Q9NWS9 450 aa17.29■□□□□ 0.36
TRAPPC3-210ENST00000617904 SHOC2Q9UQ13 582 aa17.29■□□□□ 0.36
TRAPPC3-210ENST00000617904 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP17.28■□□□□ 0.36
TRAPPC3-210ENST00000617904 TLR5O60602 858 aa17.28■□□□□ 0.36
TRAPPC3-210ENST00000617904 FGF19O95750 216 aa17.28■□□□□ 0.36
TRAPPC3-210ENST00000617904 PECAM1P16284 738 aaPredicted RBP17.28■□□□□ 0.36
TRAPPC3-210ENST00000617904 KLRC2P26717 231 aa17.28■□□□□ 0.36
TRAPPC3-210ENST00000617904 HARS2P49590 506 aaKnown RBP17.28■□□□□ 0.36
TRAPPC3-210ENST00000617904 VPS41P49754 854 aa17.28■□□□□ 0.36
TRAPPC3-210ENST00000617904 ITGA8P53708 1063 aa17.28■□□□□ 0.36
TRAPPC3-210ENST00000617904 EIF3BP55884 814 aaKnown RBP17.28■□□□□ 0.36
TRAPPC3-210ENST00000617904 SARNPP82979 210 aaKnown RBP17.28■□□□□ 0.36
TRAPPC3-210ENST00000617904 ZXDAP98168 799 aa17.28■□□□□ 0.36
TRAPPC3-210ENST00000617904 DHX9Q08211 1270 aaKnown RBP17.28■□□□□ 0.36
TRAPPC3-210ENST00000617904 TRIP13Q15645 432 aaPredicted RBP17.28■□□□□ 0.36
TRAPPC3-210ENST00000617904 SNX30Q5VWJ9 437 aa17.28■□□□□ 0.36
TRAPPC3-210ENST00000617904 RWDD4Q6NW29 188 aaKnown RBP17.28■□□□□ 0.36
TRAPPC3-210ENST00000617904 ANKRD54Q6NXT1 300 aa17.28■□□□□ 0.36
TRAPPC3-210ENST00000617904 KLHDC10Q6PID8 442 aa17.28■□□□□ 0.36
TRAPPC3-210ENST00000617904 SYCE2Q6PIF2 218 aa17.28■□□□□ 0.36
TRAPPC3-210ENST00000617904 TRIM67Q6ZTA4 783 aa17.28■□□□□ 0.36
TRAPPC3-210ENST00000617904 TRMT10CQ7L0Y3 403 aaKnown RBP17.28■□□□□ 0.36
TRAPPC3-210ENST00000617904 HOOK3Q86VS8 718 aa17.28■□□□□ 0.36
TRAPPC3-210ENST00000617904 LRRC49Q8IUZ0 686 aa17.28■□□□□ 0.36
TRAPPC3-210ENST00000617904 PPIL6Q8IXY8 311 aa17.28■□□□□ 0.36
TRAPPC3-210ENST00000617904 KRT222Q8N1A0 295 aa17.28■□□□□ 0.36
TRAPPC3-210ENST00000617904 TTC9BQ8N6N2 239 aa17.28■□□□□ 0.36
TRAPPC3-210ENST00000617904 UBLCP1Q8WVY7 318 aaPredicted RBP17.28■□□□□ 0.36
TRAPPC3-210ENST00000617904 MYRFLQ96LU7 910 aa17.28■□□□□ 0.36
TRAPPC3-210ENST00000617904 SIK2Q9H0K1 926 aa17.28■□□□□ 0.36
TRAPPC3-210ENST00000617904 RETREG1Q9H6L5 497 aa17.28■□□□□ 0.36
TRAPPC3-210ENST00000617904 ZDHHC18Q9NUE0 388 aa17.28■□□□□ 0.36
TRAPPC3-210ENST00000617904 SFMBT1Q9UHJ3 866 aa17.28■□□□□ 0.36
TRAPPC3-210ENST00000617904 SLC12A8A0AV02 714 aa17.27■□□□□ 0.36
TRAPPC3-210ENST00000617904 TMEM221A6NGB7 291 aa17.27■□□□□ 0.36
TRAPPC3-210ENST00000617904 KCNU1A8MYU2 1149 aa17.27■□□□□ 0.36
TRAPPC3-210ENST00000617904 M0R296 226 aa17.27■□□□□ 0.36
TRAPPC3-210ENST00000617904 SOAT2O75908 522 aa17.27■□□□□ 0.36
TRAPPC3-210ENST00000617904 ZDHHC11BP0C7U3 371 aa17.27■□□□□ 0.36
TRAPPC3-210ENST00000617904 ERCC2P18074 760 aa17.27■□□□□ 0.36
TRAPPC3-210ENST00000617904 ATF6P18850 670 aa17.27■□□□□ 0.36
TRAPPC3-210ENST00000617904 SLC11A2P49281 568 aa17.27■□□□□ 0.36
TRAPPC3-210ENST00000617904 PMS2P54278 862 aa17.27■□□□□ 0.36
TRAPPC3-210ENST00000617904 USP46P62068 366 aa17.27■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms