RNA–Protein interactions for RNA: ENST00000617617.4

PDPN-211, Transcript of podoplanin, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PDPN, Length 2,808 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-211ENST00000617617 ADGRF1Q5T601 910 aa12.09□□□□□ -0.47
PDPN-211ENST00000617617 CCDC105Q8IYK2 499 aa12.09□□□□□ -0.47
PDPN-211ENST00000617617 ATG4AQ8WYN0 398 aa12.09□□□□□ -0.47
PDPN-211ENST00000617617 PNKPQ96T60 521 aa12.09□□□□□ -0.47
PDPN-211ENST00000617617 KIF9Q9HAQ2 790 aa12.09□□□□□ -0.47
PDPN-211ENST00000617617 ETNK2Q9NVF9 386 aa12.09□□□□□ -0.47
PDPN-211ENST00000617617 DMGDHQ9UI17 866 aaKnown RBP12.09□□□□□ -0.47
PDPN-211ENST00000617617 E2F8A0AVK6 867 aa12.09□□□□□ -0.47
PDPN-211ENST00000617617 CCDC151A5D8V7 595 aa12.09□□□□□ -0.47
PDPN-211ENST00000617617 PPP1R12AO14974 1030 aaPredicted RBP12.09□□□□□ -0.47
PDPN-211ENST00000617617 MTSS1O43312 755 aa12.09□□□□□ -0.47
PDPN-211ENST00000617617 CREB3O43889 395 aa12.09□□□□□ -0.47
PDPN-211ENST00000617617 RFPL2O75678 378 aa12.09□□□□□ -0.47
PDPN-211ENST00000617617 KLKB1P03952 638 aa12.09□□□□□ -0.47
PDPN-211ENST00000617617 MBL2P11226 248 aaPredicted RBP12.09□□□□□ -0.47
PDPN-211ENST00000617617 PPIDQ08752 370 aaKnown RBP12.09□□□□□ -0.47
PDPN-211ENST00000617617 HYAL1Q12794 435 aa12.09□□□□□ -0.47
PDPN-211ENST00000617617 USP4Q13107 963 aa12.09□□□□□ -0.47
PDPN-211ENST00000617617 P3H1Q32P28 736 aa12.09□□□□□ -0.47
PDPN-211ENST00000617617 MPP7Q5T2T1 576 aa12.09□□□□□ -0.47
PDPN-211ENST00000617617 ZNF783Q6ZMS7 281 aa12.09□□□□□ -0.47
PDPN-211ENST00000617617 GPR149Q86SP6 731 aa12.09□□□□□ -0.47
PDPN-211ENST00000617617 CCDC89Q8N998 374 aa12.09□□□□□ -0.47
PDPN-211ENST00000617617 BBOF1Q8ND07 529 aa12.09□□□□□ -0.47
PDPN-211ENST00000617617 SLC46A2Q9BY10 475 aa12.09□□□□□ -0.47
PDPN-211ENST00000617617 NACA2Q9H009 215 aa12.09□□□□□ -0.47
PDPN-211ENST00000617617 ZNF576Q9H609 170 aa12.09□□□□□ -0.47
PDPN-211ENST00000617617 TRPV4Q9HBA0 871 aa12.09□□□□□ -0.47
PDPN-211ENST00000617617 XPO7Q9UIA9 1087 aaKnown RBP12.09□□□□□ -0.47
PDPN-211ENST00000617617 AGO1Q9UL18 857 aaKnown RBP12.09□□□□□ -0.47
PDPN-211ENST00000617617 SMAPO00193 183 aa12.08□□□□□ -0.48
PDPN-211ENST00000617617 MFSD11O43934 449 aa12.08□□□□□ -0.48
PDPN-211ENST00000617617 GLP2RO95838 553 aa12.08□□□□□ -0.48
PDPN-211ENST00000617617 IVDP26440 423 aa12.08□□□□□ -0.48
PDPN-211ENST00000617617 EPHB2P29323 1055 aa12.08□□□□□ -0.48
PDPN-211ENST00000617617 CORO1AP31146 461 aaKnown RBP12.08□□□□□ -0.48
PDPN-211ENST00000617617 KCNQ1P51787 676 aa12.08□□□□□ -0.48
PDPN-211ENST00000617617 GBE1Q04446 702 aa12.08□□□□□ -0.48
PDPN-211ENST00000617617 ADAM15Q13444 863 aa12.08□□□□□ -0.48
PDPN-211ENST00000617617 TXNDC8Q6A555 127 aa12.08□□□□□ -0.48
PDPN-211ENST00000617617 ANKRD54Q6NXT1 300 aa12.08□□□□□ -0.48
PDPN-211ENST00000617617 FBXL22Q6P050 247 aa12.08□□□□□ -0.48
PDPN-211ENST00000617617 CCNI2Q6ZMN8 369 aaPredicted RBP12.08□□□□□ -0.48
PDPN-211ENST00000617617 C14orf80Q86SX3 495 aa12.08□□□□□ -0.48
PDPN-211ENST00000617617 CMTM8Q8IZV2 173 aa12.08□□□□□ -0.48
PDPN-211ENST00000617617 ATXN3LQ9H3M9 355 aa12.08□□□□□ -0.48
PDPN-211ENST00000617617 OBP2AQ9NY56 170 aa12.08□□□□□ -0.48
PDPN-211ENST00000617617 A0A1W2PRU2 124 aa12.08□□□□□ -0.48
PDPN-211ENST00000617617 C5orf60A6NFR6 353 aa12.08□□□□□ -0.48
PDPN-211ENST00000617617 NRG2O14511 850 aaPredicted RBP12.08□□□□□ -0.48
PDPN-211ENST00000617617 PER2O15055 1255 aa12.08□□□□□ -0.48
PDPN-211ENST00000617617 GCATO75600 419 aa12.08□□□□□ -0.48
PDPN-211ENST00000617617 RHOXF2BP0C7M4 288 aa12.08□□□□□ -0.48
PDPN-211ENST00000617617 RBP3P10745 1247 aa12.08□□□□□ -0.48
PDPN-211ENST00000617617 MYL4P12829 197 aa12.08□□□□□ -0.48
PDPN-211ENST00000617617 MAGEA6P43360 314 aa12.08□□□□□ -0.48
PDPN-211ENST00000617617 CYP4F8P98187 520 aa12.08□□□□□ -0.48
PDPN-211ENST00000617617 CAV1Q03135 178 aa12.08□□□□□ -0.48
PDPN-211ENST00000617617 CTC1Q2NKJ3 1217 aa12.08□□□□□ -0.48
PDPN-211ENST00000617617 RABGAP1LQ5R372 815 aa12.08□□□□□ -0.48
PDPN-211ENST00000617617 NPNTQ6UXI9 565 aa12.08□□□□□ -0.48
PDPN-211ENST00000617617 CHRDL2Q6WN34 429 aa12.08□□□□□ -0.48
PDPN-211ENST00000617617 ARHGAP12Q8IWW6 846 aa12.08□□□□□ -0.48
PDPN-211ENST00000617617 ARL14EPQ8N8R7 260 aaPredicted RBP12.08□□□□□ -0.48
PDPN-211ENST00000617617 SLC22A12Q96S37 553 aa12.08□□□□□ -0.48
PDPN-211ENST00000617617 RHOXF2Q9BQY4 288 aa12.08□□□□□ -0.48
PDPN-211ENST00000617617 PHACTR1Q9C0D0 580 aa12.08□□□□□ -0.48
PDPN-211ENST00000617617 CERS4Q9HA82 394 aa12.08□□□□□ -0.48
PDPN-211ENST00000617617 HCFC1R1Q9NWW0 138 aa12.08□□□□□ -0.48
PDPN-211ENST00000617617 CPQQ9Y646 472 aa12.08□□□□□ -0.48
PDPN-211ENST00000617617 F5H5T6 163 aa12.07□□□□□ -0.48
PDPN-211ENST00000617617 DAPK3O43293 454 aa12.07□□□□□ -0.48
PDPN-211ENST00000617617 CDH4P55283 916 aa12.07□□□□□ -0.48
PDPN-211ENST00000617617 YBEYP58557 167 aaPredicted RBP12.07□□□□□ -0.48
PDPN-211ENST00000617617 DYNLT1P63172 113 aa12.07□□□□□ -0.48
PDPN-211ENST00000617617 SLC5A9Q2M3M2 681 aa12.07□□□□□ -0.48
PDPN-211ENST00000617617 KLHDC8BQ8IXV7 354 aa12.07□□□□□ -0.48
PDPN-211ENST00000617617 NPWQ8N729 165 aa12.07□□□□□ -0.48
PDPN-211ENST00000617617 TFB1MQ8WVM0 346 aaKnown RBP12.07□□□□□ -0.48
PDPN-211ENST00000617617 LSM7Q9UK45 103 aaKnown RBP12.07□□□□□ -0.48
PDPN-211ENST00000617617 SNX10Q9Y5X0 201 aa12.07□□□□□ -0.48
PDPN-211ENST00000617617 ITIH2P19823 946 aa12.07□□□□□ -0.48
PDPN-211ENST00000617617 ECHS1P30084 290 aa12.07□□□□□ -0.48
PDPN-211ENST00000617617 SLC6A4P31645 630 aa12.07□□□□□ -0.48
PDPN-211ENST00000617617 ZXDBP98169 803 aa12.07□□□□□ -0.48
PDPN-211ENST00000617617 NAA30Q147X3 362 aaPredicted RBP12.07□□□□□ -0.48
PDPN-211ENST00000617617 CASKIN2Q8WXE0 1202 aa12.07□□□□□ -0.48
PDPN-211ENST00000617617 SMG7Q92540 1137 aaKnown RBP12.07□□□□□ -0.48
PDPN-211ENST00000617617 OTUB2Q96DC9 234 aa12.07□□□□□ -0.48
PDPN-211ENST00000617617 VAT1Q99536 393 aa12.07□□□□□ -0.48
PDPN-211ENST00000617617 FOXP3Q9BZS1 431 aa12.07□□□□□ -0.48
PDPN-211ENST00000617617 GRHL1Q9NZI5 618 aa12.07□□□□□ -0.48
PDPN-211ENST00000617617 ZNF148Q9UQR1 794 aa12.07□□□□□ -0.48
PDPN-211ENST00000617617 DOCK8Q8NF50 2099 aa12.07□□□□□ -0.48
PDPN-211ENST00000617617 CCNCP24863 283 aa12.06□□□□□ -0.48
PDPN-211ENST00000617617 GARSP41250 739 aaKnown RBP12.06□□□□□ -0.48
PDPN-211ENST00000617617 KCNJ1P48048 391 aa12.06□□□□□ -0.48
PDPN-211ENST00000617617 SNX1Q13596 522 aa12.06□□□□□ -0.48
PDPN-211ENST00000617617 TEAD2Q15562 447 aa12.06□□□□□ -0.48
PDPN-211ENST00000617617 ZNF77Q15935 545 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms