RNA–Protein interactions for RNA: ENST00000615843.4

SPAST-203, Transcript of spastin, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SPAST, Length 5,212 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPAST-203ENST00000615843 GH1P01241 217 aa19.24■□□□□ 0.67
SPAST-203ENST00000615843 KDELR1P24390 212 aa19.24■□□□□ 0.67
SPAST-203ENST00000615843 ALDH6A1Q02252 535 aaKnown RBP19.24■□□□□ 0.67
SPAST-203ENST00000615843 EPS8Q12929 822 aa19.24■□□□□ 0.67
SPAST-203ENST00000615843 SFRP1Q8N474 314 aa19.24■□□□□ 0.67
SPAST-203ENST00000615843 FITM2Q8N6M3 262 aa19.24■□□□□ 0.67
SPAST-203ENST00000615843 STN1Q9H668 368 aaKnown RBP19.24■□□□□ 0.67
SPAST-203ENST00000615843 ETNK2Q9NVF9 386 aa19.24■□□□□ 0.67
SPAST-203ENST00000615843 CCNA2P20248 432 aa19.24■□□□□ 0.67
SPAST-203ENST00000615843 MSH3P20585 1137 aa19.24■□□□□ 0.67
SPAST-203ENST00000615843 MSLNQ13421 630 aaPredicted RBP19.24■□□□□ 0.67
SPAST-203ENST00000615843 TOP3AQ13472 1001 aaPredicted RBP19.24■□□□□ 0.67
SPAST-203ENST00000615843 ARHGEF7Q14155 803 aa19.24■□□□□ 0.67
SPAST-203ENST00000615843 TRIM71Q2Q1W2 868 aaKnown RBP19.24■□□□□ 0.67
SPAST-203ENST00000615843 DGKKQ5KSL6 1271 aa19.24■□□□□ 0.67
SPAST-203ENST00000615843 TMEM165Q9HC07 324 aa19.24■□□□□ 0.67
SPAST-203ENST00000615843 C19orf81C9J6K1 198 aa19.23■□□□□ 0.67
SPAST-203ENST00000615843 BANF1O75531 89 aa19.23■□□□□ 0.67
SPAST-203ENST00000615843 ASMTLO95671 621 aa19.23■□□□□ 0.67
SPAST-203ENST00000615843 IFNA14P01570 189 aa19.23■□□□□ 0.67
SPAST-203ENST00000615843 KRT6BP04259 564 aa19.23■□□□□ 0.67
SPAST-203ENST00000615843 GLRA2P23416 452 aa19.23■□□□□ 0.67
SPAST-203ENST00000615843 ADSSP30520 456 aa19.23■□□□□ 0.67
SPAST-203ENST00000615843 KRT6CP48668 564 aa19.23■□□□□ 0.67
SPAST-203ENST00000615843 NOTUMQ6P988 496 aa19.23■□□□□ 0.67
SPAST-203ENST00000615843 SLC44A2Q8IWA5 706 aaPredicted RBP19.23■□□□□ 0.67
SPAST-203ENST00000615843 CLK4Q9HAZ1 481 aaKnown RBP19.23■□□□□ 0.67
SPAST-203ENST00000615843 R3HDM2Q9Y2K5 976 aaKnown RBP19.23■□□□□ 0.67
SPAST-203ENST00000615843 CHI3L1P36222 383 aaPredicted RBP19.23■□□□□ 0.67
SPAST-203ENST00000615843 RARRES1P49788 294 aa19.23■□□□□ 0.67
SPAST-203ENST00000615843 CASP5P51878 434 aa19.23■□□□□ 0.67
SPAST-203ENST00000615843 KRT73Q86Y46 540 aa19.23■□□□□ 0.67
SPAST-203ENST00000615843 ZNF276Q8N554 614 aa19.23■□□□□ 0.67
SPAST-203ENST00000615843 KLHL23Q8NBE8 558 aa19.23■□□□□ 0.67
SPAST-203ENST00000615843 ATG4CQ96DT6 458 aa19.23■□□□□ 0.67
SPAST-203ENST00000615843 MARK4Q96L34 752 aa19.23■□□□□ 0.67
SPAST-203ENST00000615843 APBA2Q99767 749 aa19.23■□□□□ 0.67
SPAST-203ENST00000615843 MTG1Q9BT17 334 aaPredicted RBP19.23■□□□□ 0.67
SPAST-203ENST00000615843 PLA2G4CQ9UP65 541 aa19.23■□□□□ 0.67
SPAST-203ENST00000615843 SEC24AO95486 1093 aa19.23■□□□□ 0.67
SPAST-203ENST00000615843 HIST2H2ACQ16777 129 aaPredicted RBP19.23■□□□□ 0.67
SPAST-203ENST00000615843 TTC23Q5W5X9 447 aa19.23■□□□□ 0.67
SPAST-203ENST00000615843 HIST2H2AA3Q6FI13 130 aa19.23■□□□□ 0.67
SPAST-203ENST00000615843 MFSD5Q6N075 450 aa19.23■□□□□ 0.67
SPAST-203ENST00000615843 KCNT2Q6UVM3 1135 aa19.23■□□□□ 0.67
SPAST-203ENST00000615843 BORCS5Q969J3 196 aa19.23■□□□□ 0.67
SPAST-203ENST00000615843 ACOX2Q99424 681 aa19.23■□□□□ 0.67
SPAST-203ENST00000615843 SH3GLB1Q9Y371 365 aa19.23■□□□□ 0.67
SPAST-203ENST00000615843 HBS1LQ9Y450 684 aaKnown RBP19.23■□□□□ 0.67
SPAST-203ENST00000615843 A0A1W2PPM1 405 aa19.23■□□□□ 0.67
SPAST-203ENST00000615843 FSCN2O14926 492 aa19.23■□□□□ 0.67
SPAST-203ENST00000615843 SLC2A3P11169 496 aa19.23■□□□□ 0.67
SPAST-203ENST00000615843 RPL22P35268 128 aaKnown RBP19.23■□□□□ 0.67
SPAST-203ENST00000615843 CNTN1Q12860 1018 aa19.23■□□□□ 0.67
SPAST-203ENST00000615843 LPCAT4Q643R3 524 aa19.23■□□□□ 0.67
SPAST-203ENST00000615843 IRF2BP2Q7Z5L9 587 aa19.23■□□□□ 0.67
SPAST-203ENST00000615843 RP9Q8TA86 221 aaKnown RBP19.23■□□□□ 0.67
SPAST-203ENST00000615843 RNFT2Q96EX2 444 aa19.23■□□□□ 0.67
SPAST-203ENST00000615843 NUAK2Q9H093 628 aa19.23■□□□□ 0.67
SPAST-203ENST00000615843 TMEM191CA6NGB0 347 aa19.22■□□□□ 0.67
SPAST-203ENST00000615843 LYNP07948 512 aa19.22■□□□□ 0.67
SPAST-203ENST00000615843 SUPT20HL2P0C7V6 817 aa19.22■□□□□ 0.67
SPAST-203ENST00000615843 AMPD1P23109 780 aa19.22■□□□□ 0.67
SPAST-203ENST00000615843 NEK3P51956 506 aa19.22■□□□□ 0.67
SPAST-203ENST00000615843 PPP3CAQ08209 521 aa19.22■□□□□ 0.67
SPAST-203ENST00000615843 ZNF470Q6ECI4 717 aa19.22■□□□□ 0.67
SPAST-203ENST00000615843 FBXO39Q8N4B4 442 aa19.22■□□□□ 0.67
SPAST-203ENST00000615843 KLHL20Q9Y2M5 609 aa19.22■□□□□ 0.67
SPAST-203ENST00000615843 DCDC2CA8MYV0 355 aa19.22■□□□□ 0.67
SPAST-203ENST00000615843 FAM86B1E9PN63 330 aa19.22■□□□□ 0.67
SPAST-203ENST00000615843 VPS4BO75351 444 aa19.22■□□□□ 0.67
SPAST-203ENST00000615843 VAPBO95292 243 aa19.22■□□□□ 0.67
SPAST-203ENST00000615843 STAG3L1P0CL83 205 aa19.22■□□□□ 0.67
SPAST-203ENST00000615843 SOX10P56693 466 aa19.22■□□□□ 0.67
SPAST-203ENST00000615843 COX10Q12887 443 aa19.22■□□□□ 0.67
SPAST-203ENST00000615843 RASGEF1CQ8N431 466 aa19.22■□□□□ 0.67
SPAST-203ENST00000615843 CYP2W1Q8TAV3 490 aa19.22■□□□□ 0.67
SPAST-203ENST00000615843 SLC4A5Q9BY07 1137 aa19.22■□□□□ 0.67
SPAST-203ENST00000615843 ACP6Q9NPH0 428 aa19.22■□□□□ 0.67
SPAST-203ENST00000615843 TIMMDC1Q9NPL8 285 aa19.22■□□□□ 0.67
SPAST-203ENST00000615843 ABCB10Q9NRK6 738 aa19.22■□□□□ 0.67
SPAST-203ENST00000615843 CENPXA8MT69 81 aa19.22■□□□□ 0.67
SPAST-203ENST00000615843 TNFRSF21O75509 655 aa19.22■□□□□ 0.67
SPAST-203ENST00000615843 ERVK-10P10266 1014 aa19.22■□□□□ 0.67
SPAST-203ENST00000615843 PLK1P53350 603 aa19.22■□□□□ 0.67
SPAST-203ENST00000615843 ZNF57Q68EA5 555 aaPredicted RBP19.22■□□□□ 0.67
SPAST-203ENST00000615843 SLC30A10Q6XR72 485 aa19.22■□□□□ 0.67
SPAST-203ENST00000615843 CYP4Z1Q86W10 505 aa19.22■□□□□ 0.67
SPAST-203ENST00000615843 ATP6V0D2Q8N8Y2 350 aa19.22■□□□□ 0.67
SPAST-203ENST00000615843 POC5Q8NA72 575 aa19.22■□□□□ 0.67
SPAST-203ENST00000615843 GMCL1Q96IK5 515 aa19.22■□□□□ 0.67
SPAST-203ENST00000615843 CHID1Q9BWS9 393 aa19.22■□□□□ 0.67
SPAST-203ENST00000615843 TBC1D13Q9NVG8 400 aa19.22■□□□□ 0.67
SPAST-203ENST00000615843 IDH3BO43837 385 aa19.22■□□□□ 0.67
SPAST-203ENST00000615843 SYNCRIPO60506 623 aaKnown RBP19.22■□□□□ 0.67
SPAST-203ENST00000615843 CSDE1O75534 798 aaKnown RBP19.22■□□□□ 0.67
SPAST-203ENST00000615843 HMGCRP04035 888 aa19.22■□□□□ 0.67
SPAST-203ENST00000615843 NAGLUP54802 743 aa19.22■□□□□ 0.67
SPAST-203ENST00000615843 HOMEZQ8IX15 550 aa19.22■□□□□ 0.67
SPAST-203ENST00000615843 ALG3Q92685 438 aa19.22■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms