RNA–Protein interactions for RNA: ENST00000615230.4

TNFRSF9-204, Transcript of TNF receptor superfamily member 9, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TNFRSF9, Length 5,970 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF9-204ENST00000615230 TM9SF1O15321 606 aa9.96□□□□□ -0.82
TNFRSF9-204ENST00000615230 ZBTB14O43829 449 aa9.96□□□□□ -0.82
TNFRSF9-204ENST00000615230 ANXA5P08758 320 aa9.96□□□□□ -0.82
TNFRSF9-204ENST00000615230 TNNI3P19429 210 aa9.96□□□□□ -0.82
TNFRSF9-204ENST00000615230 TLX1P31314 330 aaPredicted RBP9.96□□□□□ -0.82
TNFRSF9-204ENST00000615230 SMAD3P84022 425 aaKnown RBP9.96□□□□□ -0.82
TNFRSF9-204ENST00000615230 PTPN21Q16825 1174 aa9.96□□□□□ -0.82
TNFRSF9-204ENST00000615230 ZNF792Q3KQV3 632 aa9.96□□□□□ -0.82
TNFRSF9-204ENST00000615230 LRP10Q7Z4F1 713 aa9.96□□□□□ -0.82
TNFRSF9-204ENST00000615230 CLEC4DQ8WXI8 215 aa9.96□□□□□ -0.82
TNFRSF9-204ENST00000615230 HSD17B14Q9BPX1 270 aa9.96□□□□□ -0.82
TNFRSF9-204ENST00000615230 MLPHQ9BV36 600 aaPredicted RBP9.96□□□□□ -0.82
TNFRSF9-204ENST00000615230 RCOR3Q9P2K3 495 aaPredicted RBP9.96□□□□□ -0.82
TNFRSF9-204ENST00000615230 SPASTQ9UBP0 616 aa9.96□□□□□ -0.82
TNFRSF9-204ENST00000615230 CCDC195A0A1B0GUA6 201 aa9.95□□□□□ -0.82
TNFRSF9-204ENST00000615230 TREHO43280 583 aa9.95□□□□□ -0.82
TNFRSF9-204ENST00000615230 HS6ST1O60243 411 aa9.95□□□□□ -0.82
TNFRSF9-204ENST00000615230 ITGA8P53708 1063 aa9.95□□□□□ -0.82
TNFRSF9-204ENST00000615230 ZNF544Q6NX49 715 aa9.95□□□□□ -0.82
TNFRSF9-204ENST00000615230 KRT78Q8N1N4 520 aa9.95□□□□□ -0.82
TNFRSF9-204ENST00000615230 MAB21L3Q8N8X9 362 aa9.95□□□□□ -0.82
TNFRSF9-204ENST00000615230 ZNF248Q8NDW4 579 aa9.95□□□□□ -0.82
TNFRSF9-204ENST00000615230 MYCBPAPQ8TBZ2 947 aa9.95□□□□□ -0.82
TNFRSF9-204ENST00000615230 ACTRT1Q8TDG2 376 aa9.95□□□□□ -0.82
TNFRSF9-204ENST00000615230 ZNF333Q96JL9 665 aa9.95□□□□□ -0.82
TNFRSF9-204ENST00000615230 CPNE1Q99829 537 aa9.95□□□□□ -0.82
TNFRSF9-204ENST00000615230 SH3GL1Q99961 368 aa9.95□□□□□ -0.82
TNFRSF9-204ENST00000615230 RUBCNLQ9H714 662 aa9.95□□□□□ -0.82
TNFRSF9-204ENST00000615230 VAV3Q9UKW4 847 aa9.95□□□□□ -0.82
TNFRSF9-204ENST00000615230 CHMP2BQ9UQN3 213 aa9.95□□□□□ -0.82
TNFRSF9-204ENST00000615230 ZDHHC9Q9Y397 364 aa9.95□□□□□ -0.82
TNFRSF9-204ENST00000615230 DTNAQ9Y4J8 743 aa9.95□□□□□ -0.82
TNFRSF9-204ENST00000615230 KRT87PA6NCN2 255 aa9.95□□□□□ -0.82
TNFRSF9-204ENST00000615230 SKOR1P84550 965 aa9.95□□□□□ -0.82
TNFRSF9-204ENST00000615230 OTUD4Q01804 1114 aaKnown RBP9.95□□□□□ -0.82
TNFRSF9-204ENST00000615230 TLE2Q04725 743 aa9.95□□□□□ -0.82
TNFRSF9-204ENST00000615230 INSCQ1MX18 579 aa9.95□□□□□ -0.82
TNFRSF9-204ENST00000615230 KREMEN2Q8NCW0 462 aa9.95□□□□□ -0.82
TNFRSF9-204ENST00000615230 ZNF296Q8WUU4 475 aaPredicted RBP9.95□□□□□ -0.82
TNFRSF9-204ENST00000615230 DNAJC1Q96KC8 554 aaKnown RBP9.95□□□□□ -0.82
TNFRSF9-204ENST00000615230 ATP6V1G3Q96LB4 118 aa9.95□□□□□ -0.82
TNFRSF9-204ENST00000615230 GBP5Q96PP8 586 aa9.95□□□□□ -0.82
TNFRSF9-204ENST00000615230 ERP44Q9BS26 406 aa9.95□□□□□ -0.82
TNFRSF9-204ENST00000615230 SMYD3Q9H7B4 428 aa9.95□□□□□ -0.82
TNFRSF9-204ENST00000615230 TAS2R13Q9NYV9 303 aa9.95□□□□□ -0.82
TNFRSF9-204ENST00000615230 PCDHA3Q9Y5H8 950 aa9.95□□□□□ -0.82
TNFRSF9-204ENST00000615230 TNPO3Q9Y5L0 923 aaKnown RBP9.95□□□□□ -0.82
TNFRSF9-204ENST00000615230 RPS6KL1Q9Y6S9 549 aa9.95□□□□□ -0.82
TNFRSF9-204ENST00000615230 HSFX4A0A1B0GTS1 333 aaPredicted RBP9.95□□□□□ -0.82
TNFRSF9-204ENST00000615230 HSFX3A0A1B0GWH4 333 aaPredicted RBP9.95□□□□□ -0.82
TNFRSF9-204ENST00000615230 RBM47A0AV96 593 aaKnown RBP9.95□□□□□ -0.82
TNFRSF9-204ENST00000615230 CATP04040 527 aaKnown RBP9.95□□□□□ -0.82
TNFRSF9-204ENST00000615230 AKT2P31751 481 aa9.95□□□□□ -0.82
TNFRSF9-204ENST00000615230 CDK16Q00536 496 aa9.95□□□□□ -0.82
TNFRSF9-204ENST00000615230 MGAT5Q09328 741 aa9.95□□□□□ -0.82
TNFRSF9-204ENST00000615230 C3orf62Q6ZUJ4 267 aa9.95□□□□□ -0.82
TNFRSF9-204ENST00000615230 SYTL1Q8IYJ3 562 aa9.95□□□□□ -0.82
TNFRSF9-204ENST00000615230 CHPFQ8IZ52 775 aa9.95□□□□□ -0.82
TNFRSF9-204ENST00000615230 MIPOL1Q8TD10 442 aa9.95□□□□□ -0.82
TNFRSF9-204ENST00000615230 TATDN2Q93075 761 aa9.95□□□□□ -0.82
TNFRSF9-204ENST00000615230 ISCUQ9H1K1 167 aa9.95□□□□□ -0.82
TNFRSF9-204ENST00000615230 RASSF4Q9H2L5 321 aa9.95□□□□□ -0.82
TNFRSF9-204ENST00000615230 PDZD7Q9H5P4 517 aa9.95□□□□□ -0.82
TNFRSF9-204ENST00000615230 ABCB6Q9NP58 842 aa9.95□□□□□ -0.82
TNFRSF9-204ENST00000615230 CSDE1O75534 798 aaKnown RBP9.95□□□□□ -0.82
TNFRSF9-204ENST00000615230 TRIM16O95361 564 aa9.95□□□□□ -0.82
TNFRSF9-204ENST00000615230 PABPC1P11940 636 aaKnown RBP9.95□□□□□ -0.82
TNFRSF9-204ENST00000615230 ARF4P18085 180 aaPredicted RBP9.95□□□□□ -0.82
TNFRSF9-204ENST00000615230 RPL3P39023 403 aaKnown RBP9.95□□□□□ -0.82
TNFRSF9-204ENST00000615230 CD151P48509 253 aa9.95□□□□□ -0.82
TNFRSF9-204ENST00000615230 BLKP51451 505 aa9.95□□□□□ -0.82
TNFRSF9-204ENST00000615230 MBTD1Q05BQ5 628 aa9.95□□□□□ -0.82
TNFRSF9-204ENST00000615230 RGS1Q08116 209 aa9.95□□□□□ -0.82
TNFRSF9-204ENST00000615230 SPIRE1Q08AE8 756 aa9.95□□□□□ -0.82
TNFRSF9-204ENST00000615230 USP49Q70CQ1 688 aa9.95□□□□□ -0.82
TNFRSF9-204ENST00000615230 HDDC3Q8N4P3 179 aa9.95□□□□□ -0.82
TNFRSF9-204ENST00000615230 SERPINB12Q96P63 405 aa9.95□□□□□ -0.82
TNFRSF9-204ENST00000615230 MIR1-1HGQ9H1L0 117 aa9.95□□□□□ -0.82
TNFRSF9-204ENST00000615230 PABPC3Q9H361 631 aaKnown RBP9.95□□□□□ -0.82
TNFRSF9-204ENST00000615230 TLR9Q9NR96 1032 aa9.95□□□□□ -0.82
TNFRSF9-204ENST00000615230 BLOC1S4Q9NUP1 217 aa9.95□□□□□ -0.82
TNFRSF9-204ENST00000615230 HEBP2Q9Y5Z4 205 aa9.95□□□□□ -0.82
TNFRSF9-204ENST00000615230 CHI3L1P36222 383 aaPredicted RBP9.95□□□□□ -0.82
TNFRSF9-204ENST00000615230 SERPINH1P50454 418 aaKnown RBP9.95□□□□□ -0.82
TNFRSF9-204ENST00000615230 UBE3AQ05086 875 aa9.95□□□□□ -0.82
TNFRSF9-204ENST00000615230 DMC1Q14565 340 aa9.95□□□□□ -0.82
TNFRSF9-204ENST00000615230 LVRNQ6Q4G3 990 aa9.95□□□□□ -0.82
TNFRSF9-204ENST00000615230 PHF13Q86YI8 300 aaPredicted RBP9.95□□□□□ -0.82
TNFRSF9-204ENST00000615230 PSTKQ8IV42 348 aaKnown RBP9.95□□□□□ -0.82
TNFRSF9-204ENST00000615230 LRRC39Q96DD0 335 aa9.95□□□□□ -0.82
TNFRSF9-204ENST00000615230 LMAN2LQ9H0V9 348 aa9.95□□□□□ -0.82
TNFRSF9-204ENST00000615230 EPC1Q9H2F5 836 aa9.95□□□□□ -0.82
TNFRSF9-204ENST00000615230 ELAC1Q9H777 363 aaKnown RBP9.95□□□□□ -0.82
TNFRSF9-204ENST00000615230 SNTNA6NMZ2 147 aa9.94□□□□□ -0.82
TNFRSF9-204ENST00000615230 TMEM114B3SHH9 223 aa9.94□□□□□ -0.82
TNFRSF9-204ENST00000615230 SMIM22K7EJ46 135 aa9.94□□□□□ -0.82
TNFRSF9-204ENST00000615230 ZBTB22O15209 634 aa9.94□□□□□ -0.82
TNFRSF9-204ENST00000615230 ATMINO43313 823 aaPredicted RBP9.94□□□□□ -0.82
TNFRSF9-204ENST00000615230 TLR5O60602 858 aa9.94□□□□□ -0.82
TNFRSF9-204ENST00000615230 AVILO75366 819 aa9.94□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms