RNA–Protein interactions for RNA: ENST00000614971.4

LTN1-207, Transcript of listerin E3 ubiquitin protein ligase 1, humanhuman

TSL 1 (best) BASIC

Gene LTN1, Length 7,756 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1-207ENST00000614971 TRIM54Q9BYV2 358 aa3.89□□□□□ -1.79
LTN1-207ENST00000614971 WWP1Q9H0M0 922 aa3.89□□□□□ -1.79
LTN1-207ENST00000614971 PDZD7Q9H5P4 517 aa3.89□□□□□ -1.79
LTN1-207ENST00000614971 SLC13A4Q9UKG4 626 aa3.89□□□□□ -1.79
LTN1-207ENST00000614971 PLA2G4CQ9UP65 541 aa3.89□□□□□ -1.79
LTN1-207ENST00000614971 PCDHGC5Q9Y5F6 944 aa3.89□□□□□ -1.79
LTN1-207ENST00000614971 TBC1D3BA6NDS4 549 aa3.89□□□□□ -1.79
LTN1-207ENST00000614971 TMEM88BA6NKF7 163 aa3.89□□□□□ -1.79
LTN1-207ENST00000614971 TSPAN1O60635 241 aa3.89□□□□□ -1.79
LTN1-207ENST00000614971 DARSP14868 501 aaKnown RBP3.89□□□□□ -1.79
LTN1-207ENST00000614971 STMN1P16949 149 aa3.89□□□□□ -1.79
LTN1-207ENST00000614971 CCND3P30281 292 aaPredicted RBP3.89□□□□□ -1.79
LTN1-207ENST00000614971 HOXA7P31268 230 aaPredicted RBP3.89□□□□□ -1.79
LTN1-207ENST00000614971 FKBP1AP62942 108 aaKnown RBP3.89□□□□□ -1.79
LTN1-207ENST00000614971 NOGQ13253 232 aa3.89□□□□□ -1.79
LTN1-207ENST00000614971 CNGA3Q16281 694 aa3.89□□□□□ -1.79
LTN1-207ENST00000614971 FSCBQ5H9T9 825 aa3.89□□□□□ -1.79
LTN1-207ENST00000614971 MAP3K21Q5TCX8 1036 aa3.89□□□□□ -1.79
LTN1-207ENST00000614971 WDR93Q6P2C0 686 aa3.89□□□□□ -1.79
LTN1-207ENST00000614971 CNSTQ6PJW8 725 aa3.89□□□□□ -1.79
LTN1-207ENST00000614971 UNC5AQ6ZN44 842 aa3.89□□□□□ -1.79
LTN1-207ENST00000614971 ZBTB46Q86UZ6 589 aa3.89□□□□□ -1.79
LTN1-207ENST00000614971 PLEKHO2Q8TD55 490 aa3.89□□□□□ -1.79
LTN1-207ENST00000614971 GTF3C2Q8WUA4 911 aaPredicted RBP3.89□□□□□ -1.79
LTN1-207ENST00000614971 MTBPQ96DY7 904 aa3.89□□□□□ -1.79
LTN1-207ENST00000614971 THUMPD3Q9BV44 507 aaKnown RBP3.89□□□□□ -1.79
LTN1-207ENST00000614971 TMBIM4Q9HC24 238 aa3.89□□□□□ -1.79
LTN1-207ENST00000614971 TLR8Q9NR97 1041 aaKnown RBP3.89□□□□□ -1.79
LTN1-207ENST00000614971 CCDC167Q9P0B6 97 aa3.89□□□□□ -1.79
LTN1-207ENST00000614971 TRMT6Q9UJA5 497 aaKnown RBP3.89□□□□□ -1.79
LTN1-207ENST00000614971 GRID1Q9ULK0 1009 aa3.89□□□□□ -1.79
LTN1-207ENST00000614971 GABRQQ9UN88 632 aa3.89□□□□□ -1.79
LTN1-207ENST00000614971 CHD4Q14839 1912 aa3.89□□□□□ -1.79
LTN1-207ENST00000614971 FFAR3O14843 346 aa3.88□□□□□ -1.79
LTN1-207ENST00000614971 GPR42O15529 346 aa3.88□□□□□ -1.79
LTN1-207ENST00000614971 DCXO43602 365 aa3.88□□□□□ -1.79
LTN1-207ENST00000614971 CCNT2O60583 730 aaKnown RBP3.88□□□□□ -1.79
LTN1-207ENST00000614971 SERPINI2O75830 405 aa3.88□□□□□ -1.79
LTN1-207ENST00000614971 FAM107AO95990 144 aa3.88□□□□□ -1.79
LTN1-207ENST00000614971 ZCCHC18P0CG32 403 aa3.88□□□□□ -1.79
LTN1-207ENST00000614971 MAPK9P45984 424 aa3.88□□□□□ -1.79
LTN1-207ENST00000614971 NAGLUP54802 743 aa3.88□□□□□ -1.79
LTN1-207ENST00000614971 NCKAP1LP55160 1127 aa3.88□□□□□ -1.79
LTN1-207ENST00000614971 NR1H3Q13133 447 aa3.88□□□□□ -1.79
LTN1-207ENST00000614971 ANKRD20A8PQ5CZ79 823 aa3.88□□□□□ -1.79
LTN1-207ENST00000614971 C9orf57Q5W0N0 161 aa3.88□□□□□ -1.79
LTN1-207ENST00000614971 CYP2R1Q6VVX0 501 aa3.88□□□□□ -1.79
LTN1-207ENST00000614971 PARP9Q8IXQ6 854 aa3.88□□□□□ -1.79
LTN1-207ENST00000614971 PNPLA1Q8N8W4 532 aa3.88□□□□□ -1.79
LTN1-207ENST00000614971 SERBP1Q8NC51 408 aaKnown RBP eCLIP3.88□□□□□ -1.79
LTN1-207ENST00000614971 FCRL2Q96LA5 508 aaPredicted RBP3.88□□□□□ -1.79
LTN1-207ENST00000614971 SEMA3CQ99985 751 aa3.88□□□□□ -1.79
LTN1-207ENST00000614971 ADNPQ9H2P0 1102 aa3.88□□□□□ -1.79
LTN1-207ENST00000614971 DHX33Q9H6R0 707 aaKnown RBP3.88□□□□□ -1.79
LTN1-207ENST00000614971 CYP3A43Q9HB55 503 aa3.88□□□□□ -1.79
LTN1-207ENST00000614971 PCDHB9Q9Y5E1 797 aa3.88□□□□□ -1.79
LTN1-207ENST00000614971 PTPRJQ12913 1337 aa3.88□□□□□ -1.79
LTN1-207ENST00000614971 A0A096LPK6 155 aa3.88□□□□□ -1.79
LTN1-207ENST00000614971 A0A1W2PQH9 124 aa3.88□□□□□ -1.79
LTN1-207ENST00000614971 HEATR9A2RTY3 570 aa3.88□□□□□ -1.79
LTN1-207ENST00000614971 PDZK1P1A8MUH7 402 aa3.88□□□□□ -1.79
LTN1-207ENST00000614971 NR5A2O00482 541 aa3.88□□□□□ -1.79
LTN1-207ENST00000614971 SERPINB3P29508 390 aa3.88□□□□□ -1.79
LTN1-207ENST00000614971 DAB2P98082 770 aa3.88□□□□□ -1.79
LTN1-207ENST00000614971 SPIRE1Q08AE8 756 aa3.88□□□□□ -1.79
LTN1-207ENST00000614971 CDC16Q13042 620 aa3.88□□□□□ -1.79
LTN1-207ENST00000614971 IKBKEQ14164 716 aa3.88□□□□□ -1.79
LTN1-207ENST00000614971 CBX2Q14781 532 aaPredicted RBP3.88□□□□□ -1.79
LTN1-207ENST00000614971 FAM110CQ1W6H9 321 aa3.88□□□□□ -1.79
LTN1-207ENST00000614971 OTOAQ7RTW8 1153 aa3.88□□□□□ -1.79
LTN1-207ENST00000614971 TRMT11Q7Z4G4 463 aaKnown RBP3.88□□□□□ -1.79
LTN1-207ENST00000614971 KCNMB4Q86W47 210 aa3.88□□□□□ -1.79
LTN1-207ENST00000614971 PHACTR4Q8IZ21 702 aa3.88□□□□□ -1.79
LTN1-207ENST00000614971 UNC5BQ8IZJ1 945 aa3.88□□□□□ -1.79
LTN1-207ENST00000614971 CCDC185Q8N715 623 aa3.88□□□□□ -1.79
LTN1-207ENST00000614971 WNT8BQ93098 351 aa3.88□□□□□ -1.79
LTN1-207ENST00000614971 PCED1BQ96HM7 432 aa3.88□□□□□ -1.79
LTN1-207ENST00000614971 DRC3Q9H069 523 aa3.88□□□□□ -1.79
LTN1-207ENST00000614971 ZNHIT2Q9UHR6 403 aa3.88□□□□□ -1.79
LTN1-207ENST00000614971 CHKBQ9Y259 395 aa3.88□□□□□ -1.79
LTN1-207ENST00000614971 SLIT3O75094 1523 aa3.88□□□□□ -1.79
LTN1-207ENST00000614971 ANKRD26Q9UPS8 1709 aa3.88□□□□□ -1.79
LTN1-207ENST00000614971 C2orf81A6NN90 581 aa3.88□□□□□ -1.79
LTN1-207ENST00000614971 DNALI1O14645 258 aaPredicted RBP3.88□□□□□ -1.79
LTN1-207ENST00000614971 INPP4BO15327 924 aa3.88□□□□□ -1.79
LTN1-207ENST00000614971 CCL16O15467 120 aa3.88□□□□□ -1.79
LTN1-207ENST00000614971 LRCH4O75427 683 aa3.88□□□□□ -1.79
LTN1-207ENST00000614971 SERPINF2P08697 491 aa3.88□□□□□ -1.79
LTN1-207ENST00000614971 HNRNPLP14866 589 aaKnown RBP eCLIP3.88□□□□□ -1.79
LTN1-207ENST00000614971 DDX5P17844 614 aaKnown RBP3.88□□□□□ -1.79
LTN1-207ENST00000614971 GABRR2P28476 465 aa3.88□□□□□ -1.79
LTN1-207ENST00000614971 HOXD13P35453 343 aa3.88□□□□□ -1.79
LTN1-207ENST00000614971 ALDH9A1P49189 494 aa3.88□□□□□ -1.79
LTN1-207ENST00000614971 PKNOX1P55347 436 aa3.88□□□□□ -1.79
LTN1-207ENST00000614971 SNRPFP62306 86 aaKnown RBP3.88□□□□□ -1.79
LTN1-207ENST00000614971 UBE3AQ05086 875 aa3.88□□□□□ -1.79
LTN1-207ENST00000614971 CNGA2Q16280 664 aa3.88□□□□□ -1.79
LTN1-207ENST00000614971 ZNF598Q86UK7 904 aaKnown RBP3.88□□□□□ -1.79
LTN1-207ENST00000614971 SLC41A1Q8IVJ1 513 aa3.88□□□□□ -1.79
LTN1-207ENST00000614971 PPTC7Q8NI37 304 aa3.88□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms