RNA–Protein interactions for RNA: ENST00000614526.1

LIG4-205, Transcript of DNA ligase 4, humanhuman

TSL 2 BASIC

Gene LIG4, Length 3,884 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG4-205ENST00000614526 PGGT1BP53609 377 aa3.53□□□□□ -1.84
LIG4-205ENST00000614526 TBX4P57082 545 aa3.53□□□□□ -1.84
LIG4-205ENST00000614526 MAXP61244 160 aa3.53□□□□□ -1.84
LIG4-205ENST00000614526 IRX4P78413 519 aa3.53□□□□□ -1.84
LIG4-205ENST00000614526 STAT4Q14765 748 aa3.53□□□□□ -1.84
LIG4-205ENST00000614526 TAF12Q16514 161 aa3.53□□□□□ -1.84
LIG4-205ENST00000614526 PCSK7Q16549 785 aa3.53□□□□□ -1.84
LIG4-205ENST00000614526 ALFQ53S48 1182 aa3.53□□□□□ -1.84
LIG4-205ENST00000614526 VSTM1Q6UX27 236 aa3.53□□□□□ -1.84
LIG4-205ENST00000614526 FAM47EQ6ZV65 393 aa3.53□□□□□ -1.84
LIG4-205ENST00000614526 ARCQ7LC44 396 aa3.53□□□□□ -1.84
LIG4-205ENST00000614526 MON1AQ86VX9 555 aa3.53□□□□□ -1.84
LIG4-205ENST00000614526 NLRP14Q86W24 1093 aa3.53□□□□□ -1.84
LIG4-205ENST00000614526 ATP11CQ8NB49 1132 aa3.53□□□□□ -1.84
LIG4-205ENST00000614526 SPOCK2Q92563 424 aa3.53□□□□□ -1.84
LIG4-205ENST00000614526 TRIM43Q96BQ3 446 aaPredicted RBP3.53□□□□□ -1.84
LIG4-205ENST00000614526 VWCEQ96DN2 955 aa3.53□□□□□ -1.84
LIG4-205ENST00000614526 MYEOVQ96EZ4 313 aa3.53□□□□□ -1.84
LIG4-205ENST00000614526 SPATA13Q96N96 652 aa3.53□□□□□ -1.84
LIG4-205ENST00000614526 KLHL5Q96PQ7 755 aa3.53□□□□□ -1.84
LIG4-205ENST00000614526 QKIQ96PU8 341 aaKnown RBP eCLIP3.53□□□□□ -1.84
LIG4-205ENST00000614526 CYP2S1Q96SQ9 504 aa3.53□□□□□ -1.84
LIG4-205ENST00000614526 SLC39A8Q9C0K1 460 aa3.53□□□□□ -1.84
LIG4-205ENST00000614526 ZMYND15Q9H091 742 aa3.53□□□□□ -1.84
LIG4-205ENST00000614526 TRABDQ9H4I3 376 aa3.53□□□□□ -1.84
LIG4-205ENST00000614526 MARCH2Q9P0N8 246 aa3.53□□□□□ -1.84
LIG4-205ENST00000614526 ACTL7AQ9Y615 435 aa3.53□□□□□ -1.84
LIG4-205ENST00000614526 HS3ST4Q9Y661 456 aa3.53□□□□□ -1.84
LIG4-205ENST00000614526 IKBKGQ9Y6K9 419 aa3.53□□□□□ -1.84
LIG4-205ENST00000614526 ZNF638Q14966 1978 aaKnown RBP3.53□□□□□ -1.84
LIG4-205ENST00000614526 PDCD11Q14690 1871 aaKnown RBP3.53□□□□□ -1.84
LIG4-205ENST00000614526 ARHGEF37A1IGU5 675 aa3.53□□□□□ -1.84
LIG4-205ENST00000614526 GMNCA6NCL1 334 aa3.53□□□□□ -1.84
LIG4-205ENST00000614526 PPP1R12AO14974 1030 aaPredicted RBP3.53□□□□□ -1.84
LIG4-205ENST00000614526 SYN3O14994 580 aa3.53□□□□□ -1.84
LIG4-205ENST00000614526 TLR5O60602 858 aa3.53□□□□□ -1.84
LIG4-205ENST00000614526 TSPAN3O60637 253 aa3.53□□□□□ -1.84
LIG4-205ENST00000614526 SHOX2O60902 331 aaPredicted RBP3.53□□□□□ -1.84
LIG4-205ENST00000614526 PMPCBO75439 489 aa3.53□□□□□ -1.84
LIG4-205ENST00000614526 GCATO75600 419 aa3.53□□□□□ -1.84
LIG4-205ENST00000614526 STK10O94804 968 aaKnown RBP3.53□□□□□ -1.84
LIG4-205ENST00000614526 SEC24AO95486 1093 aa3.53□□□□□ -1.84
LIG4-205ENST00000614526 TOP3BO95985 862 aaKnown RBP3.53□□□□□ -1.84
LIG4-205ENST00000614526 IVLP07476 585 aa3.53□□□□□ -1.84
LIG4-205ENST00000614526 ATF6P18850 670 aa3.53□□□□□ -1.84
LIG4-205ENST00000614526 FGFR3P22607 806 aa3.53□□□□□ -1.84
LIG4-205ENST00000614526 CA4P22748 312 aa3.53□□□□□ -1.84
LIG4-205ENST00000614526 PTPN3P26045 913 aa3.53□□□□□ -1.84
LIG4-205ENST00000614526 RPA3P35244 121 aaPredicted RBP3.53□□□□□ -1.84
LIG4-205ENST00000614526 MMP13P45452 471 aa3.53□□□□□ -1.84
LIG4-205ENST00000614526 GEMIN4P57678 1058 aaKnown RBP3.53□□□□□ -1.84
LIG4-205ENST00000614526 GPR17Q13304 367 aa3.53□□□□□ -1.84
LIG4-205ENST00000614526 CERCAMQ5T4B2 595 aa3.53□□□□□ -1.84
LIG4-205ENST00000614526 MROH9Q5TGP6 573 aa3.53□□□□□ -1.84
LIG4-205ENST00000614526 PIK3R6Q5UE93 754 aa3.53□□□□□ -1.84
LIG4-205ENST00000614526 UNC5AQ6ZN44 842 aa3.53□□□□□ -1.84
LIG4-205ENST00000614526 ZNF534Q76KX8 674 aa3.53□□□□□ -1.84
LIG4-205ENST00000614526 TAOK1Q7L7X3 1001 aa3.53□□□□□ -1.84
LIG4-205ENST00000614526 BNIPLQ7Z465 357 aa3.53□□□□□ -1.84
LIG4-205ENST00000614526 LRRC34Q8IZ02 419 aa3.53□□□□□ -1.84
LIG4-205ENST00000614526 PABPC5Q96DU9 382 aaKnown RBP3.53□□□□□ -1.84
LIG4-205ENST00000614526 TMEM169Q96HH4 297 aa3.53□□□□□ -1.84
LIG4-205ENST00000614526 PKNOX2Q96KN3 472 aa3.53□□□□□ -1.84
LIG4-205ENST00000614526 OLFM3Q96PB7 478 aa3.53□□□□□ -1.84
LIG4-205ENST00000614526 YME1L1Q96TA2 773 aa3.53□□□□□ -1.84
LIG4-205ENST00000614526 ELAC2Q9BQ52 826 aaKnown RBP3.53□□□□□ -1.84
LIG4-205ENST00000614526 FRMD8P1Q9BZ68 369 aaPredicted RBP3.53□□□□□ -1.84
LIG4-205ENST00000614526 SLC13A1Q9BZW2 595 aa3.53□□□□□ -1.84
LIG4-205ENST00000614526 ROPN1BQ9BZX4 212 aaPredicted RBP3.53□□□□□ -1.84
LIG4-205ENST00000614526 EPN3Q9H201 632 aa3.53□□□□□ -1.84
LIG4-205ENST00000614526 ROPN1Q9HAT0 212 aaPredicted RBP3.53□□□□□ -1.84
LIG4-205ENST00000614526 SMYD2Q9NRG4 433 aa3.53□□□□□ -1.84
LIG4-205ENST00000614526 WBP1LQ9NX94 342 aa3.53□□□□□ -1.84
LIG4-205ENST00000614526 TEX264Q9Y6I9 313 aa3.53□□□□□ -1.84
LIG4-205ENST00000614526 CFAP69A5D8W1 941 aa3.52□□□□□ -1.85
LIG4-205ENST00000614526 C5orf60A6NFR6 353 aa3.52□□□□□ -1.85
LIG4-205ENST00000614526 ARHGAP42A6NI28 874 aa3.52□□□□□ -1.85
LIG4-205ENST00000614526 TCP11X1B4DZS4 312 aa3.52□□□□□ -1.85
LIG4-205ENST00000614526 E9PAM4 449 aa3.52□□□□□ -1.85
LIG4-205ENST00000614526 J3KR12 359 aa3.52□□□□□ -1.85
LIG4-205ENST00000614526 CHADO15335 359 aa3.52□□□□□ -1.85
LIG4-205ENST00000614526 GJB3O75712 270 aa3.52□□□□□ -1.85
LIG4-205ENST00000614526 INHBAP08476 426 aa3.52□□□□□ -1.85
LIG4-205ENST00000614526 CLTBP09497 229 aa3.52□□□□□ -1.85
LIG4-205ENST00000614526 ERVK-10P10266 1014 aa3.52□□□□□ -1.85
LIG4-205ENST00000614526 ATP2A2P16615 1042 aaKnown RBP3.52□□□□□ -1.85
LIG4-205ENST00000614526 GJA1P17302 382 aa3.52□□□□□ -1.85
LIG4-205ENST00000614526 SYN1P17600 705 aa3.52□□□□□ -1.85
LIG4-205ENST00000614526 SAT1P21673 171 aa3.52□□□□□ -1.85
LIG4-205ENST00000614526 STX2P32856 288 aa3.52□□□□□ -1.85
LIG4-205ENST00000614526 CD68P34810 354 aaPredicted RBP3.52□□□□□ -1.85
LIG4-205ENST00000614526 PHBP35232 272 aa3.52□□□□□ -1.85
LIG4-205ENST00000614526 GARSP41250 739 aaKnown RBP3.52□□□□□ -1.85
LIG4-205ENST00000614526 SEMA3BQ13214 749 aa3.52□□□□□ -1.85
LIG4-205ENST00000614526 PLD1Q13393 1074 aa3.52□□□□□ -1.85
LIG4-205ENST00000614526 MRPL58Q14197 206 aaKnown RBP3.52□□□□□ -1.85
LIG4-205ENST00000614526 USP41Q3LFD5 358 aa3.52□□□□□ -1.85
LIG4-205ENST00000614526 SPDYCQ5MJ68 293 aa3.52□□□□□ -1.85
LIG4-205ENST00000614526 RNF187Q5TA31 235 aaPredicted RBP3.52□□□□□ -1.85
LIG4-205ENST00000614526 SPRED2Q7Z698 418 aa3.52□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms