RNA–Protein interactions for RNA: ENST00000613073.4

CNOT3-208, Transcript of CCR4-NOT transcription complex subunit 3, humanhuman

TSL 2

Gene CNOT3, Length 2,778 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3-208ENST00000613073 RSPH3Q86UC2 560 aa16.96■□□□□ 0.31
CNOT3-208ENST00000613073 ST13P4Q8IZP2 240 aaPredicted RBP16.96■□□□□ 0.31
CNOT3-208ENST00000613073 DEFB106AQ8N104 65 aa16.96■□□□□ 0.31
CNOT3-208ENST00000613073 TOP6BLQ8N6T0 577 aa16.96■□□□□ 0.31
CNOT3-208ENST00000613073 NETO2Q8NC67 525 aa16.96■□□□□ 0.31
CNOT3-208ENST00000613073 FBXO36Q8NEA4 188 aa16.96■□□□□ 0.31
CNOT3-208ENST00000613073 NCSTNQ92542 709 aa16.96■□□□□ 0.31
CNOT3-208ENST00000613073 WDR83Q9BRX9 315 aaKnown RBP16.96■□□□□ 0.31
CNOT3-208ENST00000613073 SPC25Q9HBM1 224 aa16.96■□□□□ 0.31
CNOT3-208ENST00000613073 TMPRSS4Q9NRS4 437 aa16.96■□□□□ 0.31
CNOT3-208ENST00000613073 DDX43Q9NXZ2 648 aaKnown RBP16.96■□□□□ 0.31
CNOT3-208ENST00000613073 AP4E1Q9UPM8 1137 aa16.96■□□□□ 0.31
CNOT3-208ENST00000613073 PCDHGA4Q9Y5G9 962 aa16.96■□□□□ 0.31
CNOT3-208ENST00000613073 CLUHO75153 1309 aa16.96■□□□□ 0.3
CNOT3-208ENST00000613073 CCDC160A6NGH7 325 aa16.95■□□□□ 0.3
CNOT3-208ENST00000613073 THP07101 528 aa16.95■□□□□ 0.3
CNOT3-208ENST00000613073 STIP1P31948 543 aaKnown RBP16.95■□□□□ 0.3
CNOT3-208ENST00000613073 L1CAMP32004 1257 aa16.95■□□□□ 0.3
CNOT3-208ENST00000613073 FCGRTP55899 365 aa16.95■□□□□ 0.3
CNOT3-208ENST00000613073 C1QTNF12Q5T7M4 302 aa16.95■□□□□ 0.3
CNOT3-208ENST00000613073 C3orf58Q8NDZ4 430 aa16.95■□□□□ 0.3
CNOT3-208ENST00000613073 SHKBP1Q8TBC3 707 aa16.95■□□□□ 0.3
CNOT3-208ENST00000613073 HAPLN3Q96S86 360 aa16.95■□□□□ 0.3
CNOT3-208ENST00000613073 TMEM120AQ9BXJ8 343 aa16.95■□□□□ 0.3
CNOT3-208ENST00000613073 DUSP16Q9BY84 665 aa16.95■□□□□ 0.3
CNOT3-208ENST00000613073 USP29Q9HBJ7 922 aa16.95■□□□□ 0.3
CNOT3-208ENST00000613073 NDE1Q9NXR1 346 aa16.95■□□□□ 0.3
CNOT3-208ENST00000613073 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP16.95■□□□□ 0.3
CNOT3-208ENST00000613073 ANGPTL2Q9UKU9 493 aa16.95■□□□□ 0.3
CNOT3-208ENST00000613073 PPM1HQ9ULR3 514 aa16.95■□□□□ 0.3
CNOT3-208ENST00000613073 ARL5CA6NH57 179 aa16.95■□□□□ 0.3
CNOT3-208ENST00000613073 B2RBV5 119 aa16.95■□□□□ 0.3
CNOT3-208ENST00000613073 I3L4J1 428 aa16.95■□□□□ 0.3
CNOT3-208ENST00000613073 PDLIM1O00151 329 aa16.95■□□□□ 0.3
CNOT3-208ENST00000613073 XPO1O14980 1071 aaKnown RBP16.95■□□□□ 0.3
CNOT3-208ENST00000613073 MDM4O15151 490 aa16.95■□□□□ 0.3
CNOT3-208ENST00000613073 CA12O43570 354 aa16.95■□□□□ 0.3
CNOT3-208ENST00000613073 AVILO75366 819 aa16.95■□□□□ 0.3
CNOT3-208ENST00000613073 ENO1P06733 434 aaKnown RBP16.95■□□□□ 0.3
CNOT3-208ENST00000613073 PTPN9P43378 593 aa16.95■□□□□ 0.3
CNOT3-208ENST00000613073 CAP1Q01518 475 aa16.95■□□□□ 0.3
CNOT3-208ENST00000613073 GBE1Q04446 702 aa16.95■□□□□ 0.3
CNOT3-208ENST00000613073 C3orf62Q6ZUJ4 267 aa16.95■□□□□ 0.3
CNOT3-208ENST00000613073 RAPH1Q70E73 1250 aa16.95■□□□□ 0.3
CNOT3-208ENST00000613073 HSFY1Q96LI6 401 aa16.95■□□□□ 0.3
CNOT3-208ENST00000613073 C11orf84Q9BUA3 381 aaPredicted RBP16.95■□□□□ 0.3
CNOT3-208ENST00000613073 SENP6Q9GZR1 1112 aaPredicted RBP16.95■□□□□ 0.3
CNOT3-208ENST00000613073 NRDE2Q9H7Z3 1164 aa16.95■□□□□ 0.3
CNOT3-208ENST00000613073 RAB6BQ9NRW1 208 aa16.95■□□□□ 0.3
CNOT3-208ENST00000613073 DDX18Q9NVP1 670 aaKnown RBP16.95■□□□□ 0.3
CNOT3-208ENST00000613073 MFHAS1Q9Y4C4 1052 aa16.95■□□□□ 0.3
CNOT3-208ENST00000613073 NR2E3Q9Y5X4 410 aa16.95■□□□□ 0.3
CNOT3-208ENST00000613073 SCN10AQ9Y5Y9 1956 aa16.95■□□□□ 0.3
CNOT3-208ENST00000613073 ASGR1P07306 291 aa16.94■□□□□ 0.3
CNOT3-208ENST00000613073 ITGA2BP08514 1039 aa16.94■□□□□ 0.3
CNOT3-208ENST00000613073 NPR3P17342 541 aa16.94■□□□□ 0.3
CNOT3-208ENST00000613073 CD52P31358 61 aa16.94■□□□□ 0.3
CNOT3-208ENST00000613073 ACADSBP45954 432 aa16.94■□□□□ 0.3
CNOT3-208ENST00000613073 CACNB2Q08289 660 aaPredicted RBP16.94■□□□□ 0.3
CNOT3-208ENST00000613073 RIPOR1Q6ZS17 1223 aa16.94■□□□□ 0.3
CNOT3-208ENST00000613073 FAF2Q96CS3 445 aa16.94■□□□□ 0.3
CNOT3-208ENST00000613073 KCTD15Q96SI1 283 aaPredicted RBP16.94■□□□□ 0.3
CNOT3-208ENST00000613073 HNRNPABQ99729 332 aaKnown RBP16.94■□□□□ 0.3
CNOT3-208ENST00000613073 XPNPEP3Q9NQH7 507 aa16.94■□□□□ 0.3
CNOT3-208ENST00000613073 SLC4A7Q9Y6M7 1214 aa16.94■□□□□ 0.3
CNOT3-208ENST00000613073 TXNDC9O14530 226 aa16.94■□□□□ 0.3
CNOT3-208ENST00000613073 PRPF4O43172 522 aaKnown RBP eCLIP16.94■□□□□ 0.3
CNOT3-208ENST00000613073 KPNA6O60684 536 aa16.94■□□□□ 0.3
CNOT3-208ENST00000613073 ZBED1O96006 694 aa16.94■□□□□ 0.3
CNOT3-208ENST00000613073 ELNP15502 786 aa16.94■□□□□ 0.3
CNOT3-208ENST00000613073 CCND3P30281 292 aaPredicted RBP16.94■□□□□ 0.3
CNOT3-208ENST00000613073 SULT1E1P49888 294 aa16.94■□□□□ 0.3
CNOT3-208ENST00000613073 KDSRQ06136 332 aa16.94■□□□□ 0.3
CNOT3-208ENST00000613073 SLC10A2Q12908 348 aaPredicted RBP16.94■□□□□ 0.3
CNOT3-208ENST00000613073 SLC9A4Q6AI14 798 aa16.94■□□□□ 0.3
CNOT3-208ENST00000613073 CLEC20AQ6ZU45 233 aa16.94■□□□□ 0.3
CNOT3-208ENST00000613073 CTU1Q7Z7A3 348 aaKnown RBP16.94■□□□□ 0.3
CNOT3-208ENST00000613073 ALYREFQ86V81 257 aaKnown RBP16.94■□□□□ 0.3
CNOT3-208ENST00000613073 SERINC5Q86VE9 423 aa16.94■□□□□ 0.3
CNOT3-208ENST00000613073 PDIK1LQ8N165 341 aa16.94■□□□□ 0.3
CNOT3-208ENST00000613073 CCDC110Q8TBZ0 833 aa16.94■□□□□ 0.3
CNOT3-208ENST00000613073 CENPIQ92674 756 aaPredicted RBP16.94■□□□□ 0.3
CNOT3-208ENST00000613073 ZNF670Q9BS34 389 aa16.94■□□□□ 0.3
CNOT3-208ENST00000613073 TRIM55Q9BYV6 548 aa16.94■□□□□ 0.3
CNOT3-208ENST00000613073 LRRC4Q9HBW1 653 aa16.94■□□□□ 0.3
CNOT3-208ENST00000613073 CRTAC1Q9NQ79 661 aa16.94■□□□□ 0.3
CNOT3-208ENST00000613073 SLC17A7Q9P2U7 560 aa16.94■□□□□ 0.3
CNOT3-208ENST00000613073 HSFX1Q9UBD0 423 aa16.94■□□□□ 0.3
CNOT3-208ENST00000613073 ZNF232Q9UNY5 417 aa16.94■□□□□ 0.3
CNOT3-208ENST00000613073 SMG5Q9UPR3 1016 aaKnown RBP16.94■□□□□ 0.3
CNOT3-208ENST00000613073 POMCP01189 267 aa16.94■□□□□ 0.3
CNOT3-208ENST00000613073 ASLP04424 464 aa16.94■□□□□ 0.3
CNOT3-208ENST00000613073 RPL34P49207 117 aaKnown RBP16.94■□□□□ 0.3
CNOT3-208ENST00000613073 KCNA10Q16322 511 aa16.94■□□□□ 0.3
CNOT3-208ENST00000613073 AGMOQ6ZNB7 445 aa16.94■□□□□ 0.3
CNOT3-208ENST00000613073 RGS9BPQ6ZS82 235 aa16.94■□□□□ 0.3
CNOT3-208ENST00000613073 IGDCC3Q8IVU1 814 aa16.94■□□□□ 0.3
CNOT3-208ENST00000613073 PALM2Q8IXS6 379 aa16.94■□□□□ 0.3
CNOT3-208ENST00000613073 TSPAN18Q96SJ8 248 aa16.94■□□□□ 0.3
CNOT3-208ENST00000613073 KCNK16Q96T55 309 aa16.94■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms