RNA–Protein interactions for RNA: ENST00000611869.4

TCF3-220, Transcript of transcription factor 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TCF3, Length 4,409 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF3-220ENST00000611869 YWHAQP27348 245 aa13.45□□□□□ -0.26
TCF3-220ENST00000611869 LILRA4P59901 499 aa13.45□□□□□ -0.26
TCF3-220ENST00000611869 PWP2Q15269 919 aaKnown RBP13.45□□□□□ -0.26
TCF3-220ENST00000611869 SPANXN3Q5MJ09 141 aa13.45□□□□□ -0.26
TCF3-220ENST00000611869 SUGP1Q8IWZ8 645 aaKnown RBP13.45□□□□□ -0.26
TCF3-220ENST00000611869 ST13P4Q8IZP2 240 aaPredicted RBP13.45□□□□□ -0.26
TCF3-220ENST00000611869 TOP6BLQ8N6T0 577 aa13.45□□□□□ -0.26
TCF3-220ENST00000611869 MIPOL1Q8TD10 442 aa13.45□□□□□ -0.26
TCF3-220ENST00000611869 SEPT8Q92599 483 aa13.45□□□□□ -0.26
TCF3-220ENST00000611869 OXNAD1Q96HP4 312 aaPredicted RBP13.45□□□□□ -0.26
TCF3-220ENST00000611869 IL1RL2Q9HB29 575 aa13.45□□□□□ -0.26
TCF3-220ENST00000611869 THAP1Q9NVV9 213 aa13.45□□□□□ -0.26
TCF3-220ENST00000611869 FAM53CQ9NYF3 392 aa13.45□□□□□ -0.26
TCF3-220ENST00000611869 ADGRA2Q96PE1 1338 aa13.45□□□□□ -0.26
TCF3-220ENST00000611869 MAGEB16A2A368 324 aa13.45□□□□□ -0.26
TCF3-220ENST00000611869 F8W8V4 182 aa13.45□□□□□ -0.26
TCF3-220ENST00000611869 TULP2O00295 520 aa13.45□□□□□ -0.26
TCF3-220ENST00000611869 RENBPP51606 427 aa13.45□□□□□ -0.26
TCF3-220ENST00000611869 FOXD4Q12950 439 aaPredicted RBP13.45□□□□□ -0.26
TCF3-220ENST00000611869 BFSP2Q13515 415 aa13.45□□□□□ -0.26
TCF3-220ENST00000611869 CDH18Q13634 790 aa13.45□□□□□ -0.26
TCF3-220ENST00000611869 LAMB3Q13751 1172 aa13.45□□□□□ -0.26
TCF3-220ENST00000611869 SNX27Q96L92 541 aa13.45□□□□□ -0.26
TCF3-220ENST00000611869 MECRQ9BV79 373 aa13.45□□□□□ -0.26
TCF3-220ENST00000611869 KANSL3Q9P2N6 904 aa13.45□□□□□ -0.26
TCF3-220ENST00000611869 STARD13Q9Y3M8 1113 aa13.45□□□□□ -0.26
TCF3-220ENST00000611869 SPTLC1O15269 473 aa13.44□□□□□ -0.26
TCF3-220ENST00000611869 PYGLP06737 847 aa13.44□□□□□ -0.26
TCF3-220ENST00000611869 CSE1LP55060 971 aaKnown RBP13.44□□□□□ -0.26
TCF3-220ENST00000611869 BST1Q10588 318 aa13.44□□□□□ -0.26
TCF3-220ENST00000611869 SLC1A5Q15758 541 aa13.44□□□□□ -0.26
TCF3-220ENST00000611869 GRTP1Q5TC63 336 aa13.44□□□□□ -0.26
TCF3-220ENST00000611869 SEL1L3Q68CR1 1132 aa13.44□□□□□ -0.26
TCF3-220ENST00000611869 PTRHD1Q6GMV3 140 aaKnown RBP13.44□□□□□ -0.26
TCF3-220ENST00000611869 UNC5AQ6ZN44 842 aa13.44□□□□□ -0.26
TCF3-220ENST00000611869 ICA1LQ8NDH6 482 aa13.44□□□□□ -0.26
TCF3-220ENST00000611869 NCLNQ969V3 563 aa13.44□□□□□ -0.26
TCF3-220ENST00000611869 PHF21BQ96EK2 531 aa13.44□□□□□ -0.26
TCF3-220ENST00000611869 CERS2Q96G23 380 aa13.44□□□□□ -0.26
TCF3-220ENST00000611869 TRIM4Q9C037 500 aa13.44□□□□□ -0.26
TCF3-220ENST00000611869 TLR8Q9NR97 1041 aaKnown RBP13.44□□□□□ -0.26
TCF3-220ENST00000611869 CD274Q9NZQ7 290 aa13.44□□□□□ -0.26
TCF3-220ENST00000611869 AURKCQ9UQB9 309 aa13.44□□□□□ -0.26
TCF3-220ENST00000611869 SH3BP1Q9Y3L3 701 aa13.44□□□□□ -0.26
TCF3-220ENST00000611869 CYBBP04839 570 aa13.44□□□□□ -0.26
TCF3-220ENST00000611869 PRKAR2AP13861 404 aaKnown RBP13.44□□□□□ -0.26
TCF3-220ENST00000611869 ADRA1BP35368 520 aa13.44□□□□□ -0.26
TCF3-220ENST00000611869 NPY2RP49146 381 aa13.44□□□□□ -0.26
TCF3-220ENST00000611869 NDUFV1P49821 464 aa13.44□□□□□ -0.26
TCF3-220ENST00000611869 WNT7BP56706 349 aa13.44□□□□□ -0.26
TCF3-220ENST00000611869 TARBP2Q15633 366 aaKnown RBP13.44□□□□□ -0.26
TCF3-220ENST00000611869 SLC26A9Q7LBE3 791 aa13.44□□□□□ -0.26
TCF3-220ENST00000611869 STRADAQ7RTN6 431 aa13.44□□□□□ -0.26
TCF3-220ENST00000611869 CCDC185Q8N715 623 aa13.44□□□□□ -0.26
TCF3-220ENST00000611869 TEKT4Q8WW24 435 aa13.44□□□□□ -0.26
TCF3-220ENST00000611869 PIK3R5Q8WYR1 880 aa13.44□□□□□ -0.26
TCF3-220ENST00000611869 APBB2Q92870 758 aa13.44□□□□□ -0.26
TCF3-220ENST00000611869 CPNE1Q99829 537 aa13.44□□□□□ -0.26
TCF3-220ENST00000611869 BRD8Q9H0E9 1235 aa13.44□□□□□ -0.26
TCF3-220ENST00000611869 CNGB3Q9NQW8 809 aa13.44□□□□□ -0.26
TCF3-220ENST00000611869 ABCC13Q9NSE7 274 aa13.44□□□□□ -0.26
TCF3-220ENST00000611869 CACNG4Q9UBN1 327 aa13.44□□□□□ -0.26
TCF3-220ENST00000611869 STYXL1Q9Y6J8 313 aa13.44□□□□□ -0.26
TCF3-220ENST00000611869 DAB1O75553 588 aa13.44□□□□□ -0.26
TCF3-220ENST00000611869 CKMP06732 381 aa13.44□□□□□ -0.26
TCF3-220ENST00000611869 CD151P48509 253 aa13.44□□□□□ -0.26
TCF3-220ENST00000611869 OXCT1P55809 520 aa13.44□□□□□ -0.26
TCF3-220ENST00000611869 CA9Q16790 459 aa13.44□□□□□ -0.26
TCF3-220ENST00000611869 CYP4X1Q8N118 509 aa13.44□□□□□ -0.26
TCF3-220ENST00000611869 VAT1Q99536 393 aa13.44□□□□□ -0.26
TCF3-220ENST00000611869 STRA6Q9BX79 667 aa13.44□□□□□ -0.26
TCF3-220ENST00000611869 TRPM5Q9NZQ8 1165 aa13.44□□□□□ -0.26
TCF3-220ENST00000611869 SFMBT1Q9UHJ3 866 aa13.44□□□□□ -0.26
TCF3-220ENST00000611869 ARHGAP26Q9UNA1 814 aa13.44□□□□□ -0.26
TCF3-220ENST00000611869 NR2E3Q9Y5X4 410 aa13.44□□□□□ -0.26
TCF3-220ENST00000611869 H7C4K7 107 aa13.44□□□□□ -0.26
TCF3-220ENST00000611869 MFSD11O43934 449 aa13.44□□□□□ -0.26
TCF3-220ENST00000611869 TRIM13O60858 407 aa13.44□□□□□ -0.26
TCF3-220ENST00000611869 ALDH1A1P00352 501 aa13.44□□□□□ -0.26
TCF3-220ENST00000611869 MBL2P11226 248 aaPredicted RBP13.44□□□□□ -0.26
TCF3-220ENST00000611869 INHBEP58166 350 aa13.44□□□□□ -0.26
TCF3-220ENST00000611869 SCUBE1Q8IWY4 988 aa13.44□□□□□ -0.26
TCF3-220ENST00000611869 LZTR1Q8N653 840 aa13.44□□□□□ -0.26
TCF3-220ENST00000611869 TDRD5Q8NAT2 981 aaKnown RBP13.44□□□□□ -0.26
TCF3-220ENST00000611869 TMEM109Q9BVC6 243 aa13.44□□□□□ -0.26
TCF3-220ENST00000611869 ANLNQ9NQW6 1124 aa13.44□□□□□ -0.26
TCF3-220ENST00000611869 IL1RAPL1Q9NZN1 696 aa13.44□□□□□ -0.26
TCF3-220ENST00000611869 NCF1BA6NI72 391 aaPredicted RBP13.43□□□□□ -0.26
TCF3-220ENST00000611869 NCF1CA8MVU1 366 aaPredicted RBP13.43□□□□□ -0.26
TCF3-220ENST00000611869 SCAMP3O14828 347 aaKnown RBP13.43□□□□□ -0.26
TCF3-220ENST00000611869 NCF1P14598 390 aaPredicted RBP13.43□□□□□ -0.26
TCF3-220ENST00000611869 PLK1P53350 603 aa13.43□□□□□ -0.26
TCF3-220ENST00000611869 CCL14Q16627 93 aa13.43□□□□□ -0.26
TCF3-220ENST00000611869 C6orf10Q5SRN2 563 aa13.43□□□□□ -0.26
TCF3-220ENST00000611869 NUP93Q8N1F7 819 aa13.43□□□□□ -0.26
TCF3-220ENST00000611869 PCDH19Q8TAB3 1148 aa13.43□□□□□ -0.26
TCF3-220ENST00000611869 KCTD15Q96SI1 283 aaPredicted RBP13.43□□□□□ -0.26
TCF3-220ENST00000611869 PIDD1Q9HB75 910 aa13.43□□□□□ -0.26
TCF3-220ENST00000611869 MRPL40Q9NQ50 206 aaKnown RBP13.43□□□□□ -0.26
TCF3-220ENST00000611869 TAGLN3Q9UI15 199 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms