RNA–Protein interactions for RNA: ENST00000611736.5

VEGFA-226, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 1,239 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-226ENST00000611736 CCDC14Q49A88 953 aa26.89■■□□□ 1.9
VEGFA-226ENST00000611736 TDRD12Q587J7 1177 aaKnown RBP26.89■■□□□ 1.9
VEGFA-226ENST00000611736 CEP68Q76N32 757 aa26.89■■□□□ 1.9
VEGFA-226ENST00000611736 BNIPLQ7Z465 357 aa26.89■■□□□ 1.9
VEGFA-226ENST00000611736 C14orf80Q86SX3 495 aa26.89■■□□□ 1.9
VEGFA-226ENST00000611736 FAM131BQ86XD5 332 aa26.89■■□□□ 1.9
VEGFA-226ENST00000611736 AHI1Q8N157 1196 aa26.89■■□□□ 1.9
VEGFA-226ENST00000611736 CYB5D2Q8WUJ1 264 aa26.89■■□□□ 1.9
VEGFA-226ENST00000611736 HMGB4Q8WW32 186 aa26.89■■□□□ 1.9
VEGFA-226ENST00000611736 RPRD1AQ96P16 312 aaPredicted RBP26.89■■□□□ 1.9
VEGFA-226ENST00000611736 GABRG3Q99928 467 aa26.89■■□□□ 1.9
VEGFA-226ENST00000611736 TMPRSS4Q9NRS4 437 aa26.89■■□□□ 1.9
VEGFA-226ENST00000611736 BCCIPQ9P287 314 aaKnown RBP eCLIP26.89■■□□□ 1.9
VEGFA-226ENST00000611736 LUC7L2Q9Y383 392 aaKnown RBP26.89■■□□□ 1.9
VEGFA-226ENST00000611736 STON1Q9Y6Q2 735 aa26.89■■□□□ 1.9
VEGFA-226ENST00000611736 ITIH6Q6UXX5 1313 aa26.89■■□□□ 1.89
VEGFA-226ENST00000611736 ZNF292O60281 2723 aa26.88■■□□□ 1.89
VEGFA-226ENST00000611736 SIGLEC16A6NMB1 481 aa26.88■■□□□ 1.89
VEGFA-226ENST00000611736 H0Y626 953 aa26.88■■□□□ 1.89
VEGFA-226ENST00000611736 I6L893 689 aaPredicted RBP26.88■■□□□ 1.89
VEGFA-226ENST00000611736 DDX3XO00571 662 aaKnown RBP eCLIP26.88■■□□□ 1.897e-12■■■■□ 20
VEGFA-226ENST00000611736 TIMM44O43615 452 aa26.88■■□□□ 1.89
VEGFA-226ENST00000611736 RPP40O75818 363 aaKnown RBP26.88■■□□□ 1.89
VEGFA-226ENST00000611736 RRM1P23921 792 aa26.88■■□□□ 1.89
VEGFA-226ENST00000611736 IL12RB1P42701 662 aa26.88■■□□□ 1.89
VEGFA-226ENST00000611736 ZNF234Q14588 700 aa26.88■■□□□ 1.89
VEGFA-226ENST00000611736 RAB6CQ53S08 254 aa26.88■■□□□ 1.89
VEGFA-226ENST00000611736 FSCBQ5H9T9 825 aa26.88■■□□□ 1.89
VEGFA-226ENST00000611736 SH3PXD2AQ5TCZ1 1133 aa26.88■■□□□ 1.89
VEGFA-226ENST00000611736 PPP1R2P3Q6NXS1 205 aa26.88■■□□□ 1.89
VEGFA-226ENST00000611736 KIAA0907Q7Z7F0 614 aaPredicted RBP26.88■■□□□ 1.89
VEGFA-226ENST00000611736 ADIPOR2Q86V24 386 aa26.88■■□□□ 1.89
VEGFA-226ENST00000611736 RASSF3Q86WH2 238 aa26.88■■□□□ 1.89
VEGFA-226ENST00000611736 GAB3Q8WWW8 586 aa26.88■■□□□ 1.89
VEGFA-226ENST00000611736 SYN2Q92777 582 aaPredicted RBP26.88■■□□□ 1.89
VEGFA-226ENST00000611736 IGSF8Q969P0 613 aa26.88■■□□□ 1.89
VEGFA-226ENST00000611736 LMLNQ96KR4 655 aa26.88■■□□□ 1.89
VEGFA-226ENST00000611736 RAB6CQ9H0N0 254 aa26.88■■□□□ 1.89
VEGFA-226ENST00000611736 TMEM51Q9NW97 253 aa26.88■■□□□ 1.89
VEGFA-226ENST00000611736 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP26.88■■□□□ 1.895e-11■■■□□ 15.1
VEGFA-226ENST00000611736 A0A1W2PQF6 199 aa26.87■■□□□ 1.89
VEGFA-226ENST00000611736 TCRBV5S1A1TA0A578 114 aa26.87■■□□□ 1.89
VEGFA-226ENST00000611736 IRAK1P51617 712 aa26.87■■□□□ 1.89
VEGFA-226ENST00000611736 FUT11Q495W5 492 aa26.87■■□□□ 1.89
VEGFA-226ENST00000611736 TTC39BQ5VTQ0 682 aaPredicted RBP26.87■■□□□ 1.89
VEGFA-226ENST00000611736 MBLAC2Q68D91 279 aa26.87■■□□□ 1.89
VEGFA-226ENST00000611736 KIAA1211LQ6NV74 962 aa26.87■■□□□ 1.89
VEGFA-226ENST00000611736 WDR59Q6PJI9 974 aa26.87■■□□□ 1.89
VEGFA-226ENST00000611736 PGBD3Q8N328 593 aa26.87■■□□□ 1.89
VEGFA-226ENST00000611736 MCEEQ96PE7 176 aa26.87■■□□□ 1.89
VEGFA-226ENST00000611736 RAB23Q9ULC3 237 aa26.87■■□□□ 1.89
VEGFA-226ENST00000611736 NPC1O15118 1278 aa26.86■■□□□ 1.89
VEGFA-226ENST00000611736 ATMINO43313 823 aaPredicted RBP26.86■■□□□ 1.89
VEGFA-226ENST00000611736 POLR2EP19388 210 aaKnown RBP26.86■■□□□ 1.89
VEGFA-226ENST00000611736 GPD1P21695 349 aa26.86■■□□□ 1.89
VEGFA-226ENST00000611736 CASP14P31944 242 aa26.86■■□□□ 1.89
VEGFA-226ENST00000611736 PTPN9P43378 593 aa26.86■■□□□ 1.89
VEGFA-226ENST00000611736 HGSNATQ68CP4 663 aa26.86■■□□□ 1.89
VEGFA-226ENST00000611736 CCAR2Q8N163 923 aaKnown RBP26.86■■□□□ 1.89
VEGFA-226ENST00000611736 VCPIP1Q96JH7 1222 aa26.86■■□□□ 1.89
VEGFA-226ENST00000611736 CFAP54Q96N23 3096 aa26.86■■□□□ 1.89
VEGFA-226ENST00000611736 INVSQ9Y283 1065 aa26.86■■□□□ 1.89
VEGFA-226ENST00000611736 A0A1B0GVM2 712 aa26.85■■□□□ 1.89
VEGFA-226ENST00000611736 TCAF2A6NFQ2 919 aa26.85■■□□□ 1.89
VEGFA-226ENST00000611736 ENDOD1O94919 500 aa26.85■■□□□ 1.89
VEGFA-226ENST00000611736 FTLP02792 175 aaPredicted RBP26.85■■□□□ 1.89
VEGFA-226ENST00000611736 SERPING1P05155 500 aa26.85■■□□□ 1.89
VEGFA-226ENST00000611736 RPL7AP62424 266 aaKnown RBP26.85■■□□□ 1.89
VEGFA-226ENST00000611736 E2F5Q15329 346 aa26.85■■□□□ 1.89
VEGFA-226ENST00000611736 FNDC3BQ53EP0 1204 aaKnown RBP26.85■■□□□ 1.89
VEGFA-226ENST00000611736 SPECC1LQ69YQ0 1117 aa26.85■■□□□ 1.89
VEGFA-226ENST00000611736 DCUN1D2Q6PH85 259 aa26.85■■□□□ 1.89
VEGFA-226ENST00000611736 SERPINA13PQ6UXR4 307 aa26.85■■□□□ 1.89
VEGFA-226ENST00000611736 FAM172AQ8WUF8 416 aa26.85■■□□□ 1.89
VEGFA-226ENST00000611736 HINFPQ9BQA5 517 aa26.85■■□□□ 1.89
VEGFA-226ENST00000611736 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP26.85■■□□□ 1.89
VEGFA-226ENST00000611736 KIAA1522Q9P206 1035 aaPredicted RBP26.85■■□□□ 1.89
VEGFA-226ENST00000611736 PLA2G4CQ9UP65 541 aa26.85■■□□□ 1.89
VEGFA-226ENST00000611736 BZW2Q9Y6E2 419 aaKnown RBP26.85■■□□□ 1.89
VEGFA-226ENST00000611736 ANKRD62A6NC57 917 aa26.84■■□□□ 1.89
VEGFA-226ENST00000611736 DCLK1O15075 740 aa26.84■■□□□ 1.89
VEGFA-226ENST00000611736 PLEKP08567 350 aaPredicted RBP26.84■■□□□ 1.89
VEGFA-226ENST00000611736 GZMAP12544 262 aa26.84■■□□□ 1.89
VEGFA-226ENST00000611736 PRKCHP24723 683 aa26.84■■□□□ 1.89
VEGFA-226ENST00000611736 CSKP41240 450 aa26.84■■□□□ 1.89
VEGFA-226ENST00000611736 STARD3Q14849 445 aa26.84■■□□□ 1.89
VEGFA-226ENST00000611736 PPP1R15BQ5SWA1 713 aa26.84■■□□□ 1.89
VEGFA-226ENST00000611736 STRADAQ7RTN6 431 aa26.84■■□□□ 1.89
VEGFA-226ENST00000611736 CD248Q9HCU0 757 aa26.84■■□□□ 1.89
VEGFA-226ENST00000611736 INTS6Q9UL03 887 aaKnown RBP26.84■■□□□ 1.89
VEGFA-226ENST00000611736 ABCA7Q8IZY2 2146 aa26.84■■□□□ 1.89
VEGFA-226ENST00000611736 ZBTB24O43167 697 aaPredicted RBP26.83■■□□□ 1.89
VEGFA-226ENST00000611736 ATP5BP06576 529 aaKnown RBP26.83■■□□□ 1.89
VEGFA-226ENST00000611736 DLDP09622 509 aaKnown RBP26.83■■□□□ 1.89
VEGFA-226ENST00000611736 GABRG2P18507 467 aa26.83■■□□□ 1.89
VEGFA-226ENST00000611736 NUMBP49757 651 aa26.83■■□□□ 1.89
VEGFA-226ENST00000611736 ENPP2Q13822 863 aa26.83■■□□□ 1.89
VEGFA-226ENST00000611736 USP39Q53GS9 565 aaKnown RBP26.83■■□□□ 1.89
VEGFA-226ENST00000611736 PITRM1Q5JRX3 1037 aa26.83■■□□□ 1.89
VEGFA-226ENST00000611736 VSTM4Q8IW00 320 aa26.83■■□□□ 1.89
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms