RNA–Protein interactions for RNA: ENST00000611068.1

RTN1-209, Transcript of reticulon 1, humanhuman

TSL 5 BASIC

Gene RTN1, Length 2,647 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN1-209ENST00000611068 PCBP1Q15365 356 aaKnown RBP eCLIP16.41■□□□□ 0.22
RTN1-209ENST00000611068 WSCD1Q658N2 575 aa16.41■□□□□ 0.22
RTN1-209ENST00000611068 NEPROQ6NW34 567 aa16.41■□□□□ 0.22
RTN1-209ENST00000611068 LRRC6Q86X45 466 aa16.41■□□□□ 0.22
RTN1-209ENST00000611068 SHKBP1Q8TBC3 707 aa16.41■□□□□ 0.22
RTN1-209ENST00000611068 KBTBD7Q8WVZ9 684 aa16.41■□□□□ 0.22
RTN1-209ENST00000611068 ATG4AQ8WYN0 398 aa16.41■□□□□ 0.22
RTN1-209ENST00000611068 ERLEC1Q96DZ1 483 aa16.41■□□□□ 0.22
RTN1-209ENST00000611068 UNC93B1Q9H1C4 597 aa16.41■□□□□ 0.22
RTN1-209ENST00000611068 LIN28AQ9H9Z2 209 aaKnown RBP16.41■□□□□ 0.22
RTN1-209ENST00000611068 HEY2Q9UBP5 337 aa16.41■□□□□ 0.22
RTN1-209ENST00000611068 TMEM191CA6NGB0 347 aa16.41■□□□□ 0.22
RTN1-209ENST00000611068 MIF4GDA9UHW6 222 aaKnown RBP16.41■□□□□ 0.22
RTN1-209ENST00000611068 LSM8O95777 96 aaKnown RBP16.41■□□□□ 0.22
RTN1-209ENST00000611068 CALB1P05937 261 aa16.41■□□□□ 0.22
RTN1-209ENST00000611068 PFKMP08237 780 aa16.41■□□□□ 0.22
RTN1-209ENST00000611068 VDRP11473 427 aa16.41■□□□□ 0.22
RTN1-209ENST00000611068 KRT3P12035 628 aa16.41■□□□□ 0.22
RTN1-209ENST00000611068 ASPHQ12797 758 aa16.41■□□□□ 0.22
RTN1-209ENST00000611068 TCEAL1Q15170 157 aa16.41■□□□□ 0.22
RTN1-209ENST00000611068 SEL1L2Q5TEA6 688 aa16.41■□□□□ 0.22
RTN1-209ENST00000611068 OR6B2Q6IFH4 312 aa16.41■□□□□ 0.22
RTN1-209ENST00000611068 PMF1Q6P1K2 205 aa16.41■□□□□ 0.22
RTN1-209ENST00000611068 RNF111Q6ZNA4 994 aa16.41■□□□□ 0.22
RTN1-209ENST00000611068 TTC7BQ86TV6 843 aa16.41■□□□□ 0.22
RTN1-209ENST00000611068 TTC30AQ86WT1 665 aa16.41■□□□□ 0.22
RTN1-209ENST00000611068 NT5DC4Q86YG4 428 aa16.41■□□□□ 0.22
RTN1-209ENST00000611068 USP33Q8TEY7 942 aa16.41■□□□□ 0.22
RTN1-209ENST00000611068 NDRG1Q92597 394 aaKnown RBP16.41■□□□□ 0.22
RTN1-209ENST00000611068 CENPOQ9BU64 300 aa16.41■□□□□ 0.22
RTN1-209ENST00000611068 OSBPL10Q9BXB5 764 aa16.41■□□□□ 0.22
RTN1-209ENST00000611068 PCSK1NQ9UHG2 260 aa16.41■□□□□ 0.22
RTN1-209ENST00000611068 CKBP12277 381 aa16.4■□□□□ 0.22
RTN1-209ENST00000611068 KRT10P13645 584 aa16.4■□□□□ 0.22
RTN1-209ENST00000611068 TAF6P49848 677 aa16.4■□□□□ 0.22
RTN1-209ENST00000611068 CD300CQ08708 224 aa16.4■□□□□ 0.22
RTN1-209ENST00000611068 INCA1Q0VD86 236 aa16.4■□□□□ 0.22
RTN1-209ENST00000611068 CDO1Q16878 200 aa16.4■□□□□ 0.22
RTN1-209ENST00000611068 MMEL1Q495T6 779 aa16.4■□□□□ 0.22
RTN1-209ENST00000611068 CCDC137Q6PK04 289 aaKnown RBP16.4■□□□□ 0.22
RTN1-209ENST00000611068 APPL2Q8NEU8 664 aa16.4■□□□□ 0.22
RTN1-209ENST00000611068 SNX25Q9H3E2 840 aa16.4■□□□□ 0.22
RTN1-209ENST00000611068 ZDHHC7Q9NXF8 308 aa16.4■□□□□ 0.22
RTN1-209ENST00000611068 DERAQ9Y315 318 aa16.4■□□□□ 0.22
RTN1-209ENST00000611068 A0A0G2JND7 137 aa16.4■□□□□ 0.22
RTN1-209ENST00000611068 H3BSA7 217 aa16.4■□□□□ 0.22
RTN1-209ENST00000611068 MATN2O00339 956 aa16.4■□□□□ 0.22
RTN1-209ENST00000611068 CYB561D2O14569 222 aa16.4■□□□□ 0.22
RTN1-209ENST00000611068 DNAJC6O75061 913 aa16.4■□□□□ 0.22
RTN1-209ENST00000611068 CD4P01730 458 aa16.4■□□□□ 0.22
RTN1-209ENST00000611068 THP07101 528 aa16.4■□□□□ 0.22
RTN1-209ENST00000611068 KCNE1P15382 129 aa16.4■□□□□ 0.22
RTN1-209ENST00000611068 ENTPD1P49961 510 aa16.4■□□□□ 0.22
RTN1-209ENST00000611068 NEK2P51955 445 aa16.4■□□□□ 0.22
RTN1-209ENST00000611068 AP2B1P63010 937 aa16.4■□□□□ 0.22
RTN1-209ENST00000611068 MBTPS1Q14703 1052 aa16.4■□□□□ 0.22
RTN1-209ENST00000611068 TMED2Q15363 201 aa16.4■□□□□ 0.22
RTN1-209ENST00000611068 FAM102AQ5T9C2 384 aaPredicted RBP16.4■□□□□ 0.22
RTN1-209ENST00000611068 OSTM1Q86WC4 334 aa16.4■□□□□ 0.22
RTN1-209ENST00000611068 XYLT1Q86Y38 959 aa16.4■□□□□ 0.22
RTN1-209ENST00000611068 DENND1AQ8TEH3 1009 aa16.4■□□□□ 0.22
RTN1-209ENST00000611068 PPP4R1Q8TF05 950 aa16.4■□□□□ 0.22
RTN1-209ENST00000611068 CLEC4CQ8WTT0 213 aa16.4■□□□□ 0.22
RTN1-209ENST00000611068 DRC3Q9H069 523 aa16.4■□□□□ 0.22
RTN1-209ENST00000611068 SCINQ9Y6U3 715 aa16.4■□□□□ 0.22
RTN1-209ENST00000611068 DYTNA2CJ06 578 aa16.39■□□□□ 0.21
RTN1-209ENST00000611068 FUOMA2VDF0 154 aa16.39■□□□□ 0.21
RTN1-209ENST00000611068 HUS1O60921 280 aa16.39■□□□□ 0.21
RTN1-209ENST00000611068 ATF7P17544 494 aaPredicted RBP16.39■□□□□ 0.21
RTN1-209ENST00000611068 PSMA2P25787 234 aa16.39■□□□□ 0.21
RTN1-209ENST00000611068 C16orf72Q14CZ0 275 aa16.39■□□□□ 0.21
RTN1-209ENST00000611068 ADRM1Q16186 407 aa16.39■□□□□ 0.21
RTN1-209ENST00000611068 PPP2R5EQ16537 467 aa16.39■□□□□ 0.21
RTN1-209ENST00000611068 PDK4Q16654 411 aa16.39■□□□□ 0.21
RTN1-209ENST00000611068 SCAIQ8N9R8 606 aa16.39■□□□□ 0.21
RTN1-209ENST00000611068 VCPIP1Q96JH7 1222 aa16.39■□□□□ 0.21
RTN1-209ENST00000611068 DEFB118Q96PH6 123 aa16.39■□□□□ 0.21
RTN1-209ENST00000611068 DMTF1Q9Y222 760 aa16.39■□□□□ 0.21
RTN1-209ENST00000611068 TCRBV5S1A1TA0A578 114 aa16.39■□□□□ 0.21
RTN1-209ENST00000611068 C2orf71A6NGG8 1288 aa16.39■□□□□ 0.21
RTN1-209ENST00000611068 CBFA2T3O75081 653 aa16.39■□□□□ 0.21
RTN1-209ENST00000611068 TTC4O95801 387 aa16.39■□□□□ 0.21
RTN1-209ENST00000611068 ESRRAP11474 423 aaPredicted RBP16.39■□□□□ 0.21
RTN1-209ENST00000611068 CST5P28325 142 aaPredicted RBP16.39■□□□□ 0.21
RTN1-209ENST00000611068 SLC1A5Q15758 541 aa16.39■□□□□ 0.21
RTN1-209ENST00000611068 METTL21CQ5VZV1 264 aa16.39■□□□□ 0.21
RTN1-209ENST00000611068 ADGRF2Q8IZF7 708 aa16.39■□□□□ 0.21
RTN1-209ENST00000611068 LRRC52Q8N7C0 313 aa16.39■□□□□ 0.21
RTN1-209ENST00000611068 GADD45GIP1Q8TAE8 222 aaPredicted RBP16.39■□□□□ 0.21
RTN1-209ENST00000611068 SLC2A14Q8TDB8 520 aa16.39■□□□□ 0.21
RTN1-209ENST00000611068 NEURL2Q9BR09 285 aa16.39■□□□□ 0.21
RTN1-209ENST00000611068 ARHGEF4Q9NR80 690 aa16.39■□□□□ 0.21
RTN1-209ENST00000611068 ATAD3AQ9NVI7 634 aa16.39■□□□□ 0.21
RTN1-209ENST00000611068 NOX1Q9Y5S8 564 aa16.39■□□□□ 0.21
RTN1-209ENST00000611068 THSD7BQ9C0I4 1608 aa16.39■□□□□ 0.21
RTN1-209ENST00000611068 PODXLO00592 558 aa16.38■□□□□ 0.21
RTN1-209ENST00000611068 RALAP11233 206 aa16.38■□□□□ 0.21
RTN1-209ENST00000611068 LCP1P13796 627 aa16.38■□□□□ 0.21
RTN1-209ENST00000611068 RAP1GDS1P52306 607 aa16.38■□□□□ 0.21
RTN1-209ENST00000611068 SLC13A5Q86YT5 568 aaPredicted RBP16.38■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms