RNA–Protein interactions for RNA: ENST00000610726.4

CSDE1-218, Transcript of cold shock domain containing E1, humanhuman

TSL 5 BASIC

Gene CSDE1, Length 4,312 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-218ENST00000610726 MYH3P11055 1940 aa7.45□□□□□ -1.22
CSDE1-218ENST00000610726 CRTAMO95727 393 aa7.45□□□□□ -1.22
CSDE1-218ENST00000610726 MT-CO1P00395 513 aa7.45□□□□□ -1.22
CSDE1-218ENST00000610726 ITGAVP06756 1048 aa7.45□□□□□ -1.22
CSDE1-218ENST00000610726 UNGP13051 313 aaPredicted RBP7.45□□□□□ -1.22
CSDE1-218ENST00000610726 ASPAP45381 313 aa7.45□□□□□ -1.22
CSDE1-218ENST00000610726 MMP13P45452 471 aa7.45□□□□□ -1.22
CSDE1-218ENST00000610726 DRG2P55039 364 aaKnown RBP7.45□□□□□ -1.22
CSDE1-218ENST00000610726 GTF2H3Q13889 308 aa7.45□□□□□ -1.22
CSDE1-218ENST00000610726 TTMPQ5BVD1 217 aa7.45□□□□□ -1.22
CSDE1-218ENST00000610726 NLRP9Q7RTR0 991 aa7.45□□□□□ -1.22
CSDE1-218ENST00000610726 ADCK2Q7Z695 626 aa7.45□□□□□ -1.22
CSDE1-218ENST00000610726 USP13Q92995 863 aaPredicted RBP7.45□□□□□ -1.22
CSDE1-218ENST00000610726 ZBED3Q96IU2 234 aaPredicted RBP7.45□□□□□ -1.22
CSDE1-218ENST00000610726 EXOC2Q96KP1 924 aa7.45□□□□□ -1.22
CSDE1-218ENST00000610726 FOPNLQ96NB1 174 aa7.45□□□□□ -1.22
CSDE1-218ENST00000610726 CORO1BQ9BR76 489 aa7.45□□□□□ -1.22
CSDE1-218ENST00000610726 ADGRE3Q9BY15 652 aa7.45□□□□□ -1.22
CSDE1-218ENST00000610726 ILKAPQ9H0C8 392 aaPredicted RBP7.45□□□□□ -1.22
CSDE1-218ENST00000610726 BRD8Q9H0E9 1235 aa7.45□□□□□ -1.22
CSDE1-218ENST00000610726 IGFLR1Q9H665 355 aa7.45□□□□□ -1.22
CSDE1-218ENST00000610726 PCDHGC3Q9UN70 934 aa7.45□□□□□ -1.22
CSDE1-218ENST00000610726 MTO1Q9Y2Z2 717 aaKnown RBP7.45□□□□□ -1.22
CSDE1-218ENST00000610726 IGF2BP3O00425 579 aaKnown RBP eCLIP7.44□□□□□ -1.223e-6■■■□□ 19.1
CSDE1-218ENST00000610726 PAPSS1O43252 624 aaPredicted RBP7.44□□□□□ -1.22
CSDE1-218ENST00000610726 CPA3P15088 417 aa7.44□□□□□ -1.22
CSDE1-218ENST00000610726 ITGB6P18564 788 aa7.44□□□□□ -1.22
CSDE1-218ENST00000610726 KCNA4P22459 653 aa7.44□□□□□ -1.22
CSDE1-218ENST00000610726 FECHP22830 423 aa7.44□□□□□ -1.22
CSDE1-218ENST00000610726 TARBP2Q15633 366 aaKnown RBP7.44□□□□□ -1.22
CSDE1-218ENST00000610726 N4BP2L1Q5TBK1 243 aaPredicted RBP7.44□□□□□ -1.22
CSDE1-218ENST00000610726 LAYNQ6UX15 382 aa7.44□□□□□ -1.22
CSDE1-218ENST00000610726 MON1AQ86VX9 555 aa7.44□□□□□ -1.22
CSDE1-218ENST00000610726 TMEM199Q8N511 208 aa7.44□□□□□ -1.22
CSDE1-218ENST00000610726 SLAIN1Q8ND83 568 aa7.44□□□□□ -1.22
CSDE1-218ENST00000610726 RNF217Q8TC41 542 aa7.44□□□□□ -1.22
CSDE1-218ENST00000610726 MAGEB18Q96M61 343 aa7.44□□□□□ -1.22
CSDE1-218ENST00000610726 VAT1Q99536 393 aa7.44□□□□□ -1.22
CSDE1-218ENST00000610726 TM6SF2Q9BZW4 377 aa7.44□□□□□ -1.22
CSDE1-218ENST00000610726 CDHR5Q9HBB8 845 aa7.44□□□□□ -1.22
CSDE1-218ENST00000610726 NOP53Q9NZM5 478 aaKnown RBP7.44□□□□□ -1.22
CSDE1-218ENST00000610726 UBA2Q9UBT2 640 aaPredicted RBP7.44□□□□□ -1.22
CSDE1-218ENST00000610726 PLA2G4CQ9UP65 541 aa7.44□□□□□ -1.22
CSDE1-218ENST00000610726 HEATR9A2RTY3 570 aa7.44□□□□□ -1.22
CSDE1-218ENST00000610726 CFAP73A6NFT4 308 aa7.44□□□□□ -1.22
CSDE1-218ENST00000610726 ERI2A8K979 691 aaKnown RBP7.44□□□□□ -1.22
CSDE1-218ENST00000610726 LZTS3O60299 673 aaPredicted RBP7.44□□□□□ -1.22
CSDE1-218ENST00000610726 VPS26AO75436 327 aa7.44□□□□□ -1.22
CSDE1-218ENST00000610726 SERPIND1P05546 499 aa7.44□□□□□ -1.22
CSDE1-218ENST00000610726 PIRTP0C851 137 aa7.44□□□□□ -1.22
CSDE1-218ENST00000610726 CCNB1P14635 433 aa7.44□□□□□ -1.22
CSDE1-218ENST00000610726 TCN1P20061 433 aaPredicted RBP7.44□□□□□ -1.22
CSDE1-218ENST00000610726 ADRA1DP25100 572 aa7.44□□□□□ -1.22
CSDE1-218ENST00000610726 TARSP26639 723 aaKnown RBP7.44□□□□□ -1.22
CSDE1-218ENST00000610726 ATXN1P54253 815 aaKnown RBP7.44□□□□□ -1.22
CSDE1-218ENST00000610726 SMAD3P84022 425 aaKnown RBP7.44□□□□□ -1.22
CSDE1-218ENST00000610726 ITGA9Q13797 1035 aa7.44□□□□□ -1.22
CSDE1-218ENST00000610726 HIC1Q14526 733 aa7.44□□□□□ -1.22
CSDE1-218ENST00000610726 SOWAHAQ2M3V2 549 aa7.44□□□□□ -1.22
CSDE1-218ENST00000610726 FAM182AQ5T1J6 154 aa7.44□□□□□ -1.22
CSDE1-218ENST00000610726 LDLRAD1Q5T700 205 aa7.44□□□□□ -1.22
CSDE1-218ENST00000610726 ZNF618Q5T7W0 954 aa7.44□□□□□ -1.22
CSDE1-218ENST00000610726 SH3PXD2AQ5TCZ1 1133 aa7.44□□□□□ -1.22
CSDE1-218ENST00000610726 GDF6Q6KF10 455 aaPredicted RBP7.44□□□□□ -1.22
CSDE1-218ENST00000610726 PRPF39Q86UA1 669 aaKnown RBP7.44□□□□□ -1.22
CSDE1-218ENST00000610726 FAM228AQ86W67 206 aa7.44□□□□□ -1.22
CSDE1-218ENST00000610726 PSTKQ8IV42 348 aaKnown RBP7.44□□□□□ -1.22
CSDE1-218ENST00000610726 RASGEF1CQ8N431 466 aa7.44□□□□□ -1.22
CSDE1-218ENST00000610726 RFWD2Q8NHY2 731 aa7.44□□□□□ -1.22
CSDE1-218ENST00000610726 PIP4K2CQ8TBX8 421 aa7.44□□□□□ -1.22
CSDE1-218ENST00000610726 CLEC4CQ8WTT0 213 aa7.44□□□□□ -1.22
CSDE1-218ENST00000610726 CRYGNQ8WXF5 182 aa7.44□□□□□ -1.22
CSDE1-218ENST00000610726 PHF21BQ96EK2 531 aa7.44□□□□□ -1.22
CSDE1-218ENST00000610726 PGM2Q96G03 612 aa7.44□□□□□ -1.22
CSDE1-218ENST00000610726 SRPK1Q96SB4 655 aaKnown RBP7.44□□□□□ -1.22
CSDE1-218ENST00000610726 EMILIN2Q9BXX0 1053 aa7.44□□□□□ -1.22
CSDE1-218ENST00000610726 CLPBQ9H078 707 aa7.44□□□□□ -1.22
CSDE1-218ENST00000610726 VCX3AQ9NNX9 186 aa7.44□□□□□ -1.22
CSDE1-218ENST00000610726 SRRDQ9UH36 339 aa7.44□□□□□ -1.22
CSDE1-218ENST00000610726 GTF2IRD1Q9UHL9 959 aa7.44□□□□□ -1.22
CSDE1-218ENST00000610726 SLC25A13Q9UJS0 675 aa7.44□□□□□ -1.22
CSDE1-218ENST00000610726 DNAJC16Q9Y2G8 782 aa7.44□□□□□ -1.22
CSDE1-218ENST00000610726 CHD4Q14839 1912 aa7.44□□□□□ -1.22
CSDE1-218ENST00000610726 BTAF1O14981 1849 aa7.44□□□□□ -1.22
CSDE1-218ENST00000610726 A0A096LPK6 155 aa7.44□□□□□ -1.22
CSDE1-218ENST00000610726 MAGEB16A2A368 324 aa7.44□□□□□ -1.22
CSDE1-218ENST00000610726 EIF4E1BA6NMX2 242 aaKnown RBP7.44□□□□□ -1.22
CSDE1-218ENST00000610726 ANGPT2O15123 496 aa7.44□□□□□ -1.22
CSDE1-218ENST00000610726 DAB1O75553 588 aa7.44□□□□□ -1.22
CSDE1-218ENST00000610726 ATG7O95352 703 aa7.44□□□□□ -1.22
CSDE1-218ENST00000610726 CSH1P0DML2 217 aa7.44□□□□□ -1.22
CSDE1-218ENST00000610726 CSH2P0DML3 217 aa7.44□□□□□ -1.22
CSDE1-218ENST00000610726 RPL17P18621 184 aaKnown RBP7.44□□□□□ -1.22
CSDE1-218ENST00000610726 PGAM1P18669 254 aa7.44□□□□□ -1.22
CSDE1-218ENST00000610726 CTNNB1P35222 781 aa7.44□□□□□ -1.22
CSDE1-218ENST00000610726 CD151P48509 253 aa7.44□□□□□ -1.22
CSDE1-218ENST00000610726 AARSP49588 968 aaKnown RBP eCLIP7.44□□□□□ -1.22
CSDE1-218ENST00000610726 POU4F1Q01851 419 aa7.44□□□□□ -1.22
CSDE1-218ENST00000610726 AUHQ13825 339 aaKnown RBP7.44□□□□□ -1.22
CSDE1-218ENST00000610726 PABPC1LQ4VXU2 614 aaKnown RBP7.44□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms