RNA–Protein interactions for RNA: ENST00000609587.1

SMCHD1-213, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

Gene SMCHD1, Length 460 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-213ENST00000609587 CHRM5P08912 532 aaPredicted RBP4.8□□□□□ -1.64
SMCHD1-213ENST00000609587 CYP2D6P10635 497 aa4.8□□□□□ -1.64
SMCHD1-213ENST00000609587 SFPQP23246 707 aaKnown RBP eCLIP4.8□□□□□ -1.64
SMCHD1-213ENST00000609587 CYP3A7P24462 503 aa4.8□□□□□ -1.64
SMCHD1-213ENST00000609587 CNTFP26441 200 aa4.8□□□□□ -1.64
SMCHD1-213ENST00000609587 STAT6P42226 847 aa4.8□□□□□ -1.64
SMCHD1-213ENST00000609587 TFF2Q03403 129 aa4.8□□□□□ -1.64
SMCHD1-213ENST00000609587 POU5F1BQ06416 359 aa4.8□□□□□ -1.64
SMCHD1-213ENST00000609587 DCTN1Q14203 1278 aa4.8□□□□□ -1.64
SMCHD1-213ENST00000609587 PFKFB3Q16875 520 aaPredicted RBP4.8□□□□□ -1.64
SMCHD1-213ENST00000609587 CERKLQ49MI3 558 aaPredicted RBP4.8□□□□□ -1.64
SMCHD1-213ENST00000609587 LRRC24Q50LG9 513 aa4.8□□□□□ -1.64
SMCHD1-213ENST00000609587 AWAT1Q58HT5 328 aa4.8□□□□□ -1.64
SMCHD1-213ENST00000609587 TMEM88Q6PEY1 159 aa4.8□□□□□ -1.64
SMCHD1-213ENST00000609587 SLC39A5Q6ZMH5 540 aa4.8□□□□□ -1.64
SMCHD1-213ENST00000609587 RASGRP2Q7LDG7 609 aa4.8□□□□□ -1.64
SMCHD1-213ENST00000609587 CHSY1Q86X52 802 aa4.8□□□□□ -1.64
SMCHD1-213ENST00000609587 C16orf71Q8IYS4 520 aaPredicted RBP4.8□□□□□ -1.64
SMCHD1-213ENST00000609587 PNLDC1Q8NA58 520 aaKnown RBP4.8□□□□□ -1.64
SMCHD1-213ENST00000609587 SEMA6DQ8NFY4 1073 aa4.8□□□□□ -1.64
SMCHD1-213ENST00000609587 ASB12Q8WXK4 309 aa4.8□□□□□ -1.64
SMCHD1-213ENST00000609587 WASF1Q92558 559 aa4.8□□□□□ -1.64
SMCHD1-213ENST00000609587 KTI12Q96EK9 354 aaPredicted RBP4.8□□□□□ -1.64
SMCHD1-213ENST00000609587 TBATAQ96M53 351 aa4.8□□□□□ -1.64
SMCHD1-213ENST00000609587 SENP7Q9BQF6 1050 aa4.8□□□□□ -1.64
SMCHD1-213ENST00000609587 PLEKHA2Q9HB19 425 aa4.8□□□□□ -1.64
SMCHD1-213ENST00000609587 ARL8BQ9NVJ2 186 aa4.8□□□□□ -1.64
SMCHD1-213ENST00000609587 RCE1Q9Y256 329 aa4.8□□□□□ -1.64
SMCHD1-213ENST00000609587 B3GNT3Q9Y2A9 372 aa4.8□□□□□ -1.64
SMCHD1-213ENST00000609587 COPG1Q9Y678 874 aaKnown RBP4.8□□□□□ -1.64
SMCHD1-213ENST00000609587 SIRT4Q9Y6E7 314 aaPredicted RBP4.8□□□□□ -1.64
SMCHD1-213ENST00000609587 SETD1BQ9UPS6 1966 aaKnown RBP4.79□□□□□ -1.64
SMCHD1-213ENST00000609587 TMEM232C9JQI7 657 aa4.79□□□□□ -1.64
SMCHD1-213ENST00000609587 STX16-NPEPL1H3BU86 382 aa4.79□□□□□ -1.64
SMCHD1-213ENST00000609587 STX16O14662 325 aa4.79□□□□□ -1.64
SMCHD1-213ENST00000609587 NHLRC4P0CG21 123 aaPredicted RBP4.79□□□□□ -1.64
SMCHD1-213ENST00000609587 IGFBP2P18065 325 aa4.79□□□□□ -1.64
SMCHD1-213ENST00000609587 HOXD12P35452 270 aa4.79□□□□□ -1.64
SMCHD1-213ENST00000609587 SLC37A1P57057 533 aa4.79□□□□□ -1.64
SMCHD1-213ENST00000609587 KPNB1Q14974 876 aaKnown RBP4.79□□□□□ -1.64
SMCHD1-213ENST00000609587 ANKRD1Q15327 319 aa4.79□□□□□ -1.64
SMCHD1-213ENST00000609587 PROSER3Q2NL68 480 aa4.79□□□□□ -1.64
SMCHD1-213ENST00000609587 TMEM119Q4V9L6 283 aa4.79□□□□□ -1.64
SMCHD1-213ENST00000609587 ZNF484Q5JVG2 852 aa4.79□□□□□ -1.64
SMCHD1-213ENST00000609587 PRAMEF17Q5VTA0 474 aa4.79□□□□□ -1.64
SMCHD1-213ENST00000609587 RANBP10Q6VN20 620 aa4.79□□□□□ -1.64
SMCHD1-213ENST00000609587 MMS22LQ6ZRQ5 1243 aa4.79□□□□□ -1.64
SMCHD1-213ENST00000609587 CPOQ8IVL8 374 aa4.79□□□□□ -1.64
SMCHD1-213ENST00000609587 PAF1Q8N7H5 531 aa4.79□□□□□ -1.64
SMCHD1-213ENST00000609587 ADPRHL1Q8NDY3 354 aa4.79□□□□□ -1.64
SMCHD1-213ENST00000609587 ARRDC3Q96B67 414 aa4.79□□□□□ -1.64
SMCHD1-213ENST00000609587 ZNF845Q96IR2 970 aaPredicted RBP4.79□□□□□ -1.64
SMCHD1-213ENST00000609587 RITA1Q96K30 269 aa4.79□□□□□ -1.64
SMCHD1-213ENST00000609587 GPR78Q96P69 363 aa4.79□□□□□ -1.64
SMCHD1-213ENST00000609587 ASB2Q96Q27 587 aa4.79□□□□□ -1.64
SMCHD1-213ENST00000609587 HTATIP2Q9BUP3 242 aa4.79□□□□□ -1.64
SMCHD1-213ENST00000609587 TRIM2Q9C040 744 aa4.79□□□□□ -1.64
SMCHD1-213ENST00000609587 NUAK2Q9H093 628 aa4.79□□□□□ -1.64
SMCHD1-213ENST00000609587 RMI1Q9H9A7 625 aa4.79□□□□□ -1.64
SMCHD1-213ENST00000609587 PDE11AQ9HCR9 933 aa4.79□□□□□ -1.64
SMCHD1-213ENST00000609587 MAFFQ9ULX9 164 aa4.79□□□□□ -1.64
SMCHD1-213ENST00000609587 DNAJC16Q9Y2G8 782 aa4.79□□□□□ -1.64
SMCHD1-213ENST00000609587 LINC01548A6NM66 108 aa4.78□□□□□ -1.64
SMCHD1-213ENST00000609587 C16orf96A6NNT2 1141 aa4.78□□□□□ -1.64
SMCHD1-213ENST00000609587 AGR2O95994 175 aa4.78□□□□□ -1.64
SMCHD1-213ENST00000609587 POLBP06746 335 aa4.78□□□□□ -1.64
SMCHD1-213ENST00000609587 CNPP09543 421 aaKnown RBP4.78□□□□□ -1.64
SMCHD1-213ENST00000609587 UBE3AQ05086 875 aa4.78□□□□□ -1.64
SMCHD1-213ENST00000609587 CTXN3Q4LDR2 81 aa4.78□□□□□ -1.64
SMCHD1-213ENST00000609587 GLE1Q53GS7 698 aaKnown RBP4.78□□□□□ -1.64
SMCHD1-213ENST00000609587 CCDC70Q6NSX1 233 aa4.78□□□□□ -1.64
SMCHD1-213ENST00000609587 LVRNQ6Q4G3 990 aa4.78□□□□□ -1.64
SMCHD1-213ENST00000609587 KIAA1324Q6UXG2 1013 aaKnown RBP4.78□□□□□ -1.64
SMCHD1-213ENST00000609587 PTGR2Q8N8N7 351 aaPredicted RBP4.78□□□□□ -1.64
SMCHD1-213ENST00000609587 HERVK_113Q902F9 699 aa4.78□□□□□ -1.64
SMCHD1-213ENST00000609587 DPF1Q92782 380 aa4.78□□□□□ -1.64
SMCHD1-213ENST00000609587 CELF1Q92879 486 aaKnown RBP4.78□□□□□ -1.64
SMCHD1-213ENST00000609587 RBM17Q96I25 401 aaKnown RBP4.78□□□□□ -1.64
SMCHD1-213ENST00000609587 MAELQ96JY0 434 aaKnown RBP4.78□□□□□ -1.64
SMCHD1-213ENST00000609587 TWNKQ96RR1 684 aa4.78□□□□□ -1.64
SMCHD1-213ENST00000609587 NAP1L4Q99733 375 aaKnown RBP4.78□□□□□ -1.64
SMCHD1-213ENST00000609587 NPAS1Q99742 590 aa4.78□□□□□ -1.64
SMCHD1-213ENST00000609587 EIF2AK1Q9BQI3 630 aaKnown RBP4.78□□□□□ -1.64
SMCHD1-213ENST00000609587 ABHD14AQ9BUJ0 271 aa4.78□□□□□ -1.64
SMCHD1-213ENST00000609587 SFXN1Q9H9B4 322 aa4.78□□□□□ -1.64
SMCHD1-213ENST00000609587 PDP2Q9P2J9 529 aa4.78□□□□□ -1.64
SMCHD1-213ENST00000609587 ZNF70Q9UC06 446 aaPredicted RBP4.78□□□□□ -1.64
SMCHD1-213ENST00000609587 PGAP2Q9UHJ9 254 aa4.78□□□□□ -1.64
SMCHD1-213ENST00000609587 GJD2Q9UKL4 321 aa4.78□□□□□ -1.64
SMCHD1-213ENST00000609587 MANSC4A6NHS7 340 aaPredicted RBP4.77□□□□□ -1.65
SMCHD1-213ENST00000609587 SAC3D1A6NKF1 404 aa4.77□□□□□ -1.65
SMCHD1-213ENST00000609587 TISP43B9A030 160 aa4.77□□□□□ -1.65
SMCHD1-213ENST00000609587 GRM8O00222 908 aa4.77□□□□□ -1.65
SMCHD1-213ENST00000609587 RNF8O76064 485 aa4.77□□□□□ -1.65
SMCHD1-213ENST00000609587 CSF1P09603 554 aa4.77□□□□□ -1.65
SMCHD1-213ENST00000609587 CHN1P15882 459 aa4.77□□□□□ -1.65
SMCHD1-213ENST00000609587 HOXB6P17509 224 aaKnown RBP4.77□□□□□ -1.65
SMCHD1-213ENST00000609587 ZNF84P51523 738 aa4.77□□□□□ -1.65
SMCHD1-213ENST00000609587 TUBA4AP68366 448 aa4.77□□□□□ -1.65
SMCHD1-213ENST00000609587 SHC2P98077 582 aa4.77□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms