RNA–Protein interactions for RNA: ENST00000609574.1

HDDC2-210, Transcript of HD domain containing 2, humanhuman

TSL 2

Gene HDDC2, Length 607 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC2-210ENST00000609574 KDM1BQ8NB78 822 aa16.42■□□□□ 0.22
HDDC2-210ENST00000609574 LSM14AQ8ND56 463 aaKnown RBP16.42■□□□□ 0.22
HDDC2-210ENST00000609574 FIBINQ8TAL6 211 aa16.42■□□□□ 0.22
HDDC2-210ENST00000609574 UBA3Q8TBC4 463 aa16.42■□□□□ 0.22
HDDC2-210ENST00000609574 KCTD13Q8WZ19 329 aa16.42■□□□□ 0.22
HDDC2-210ENST00000609574 TATDN2Q93075 761 aa16.42■□□□□ 0.22
HDDC2-210ENST00000609574 AZIN2Q96A70 460 aa16.42■□□□□ 0.22
HDDC2-210ENST00000609574 TTC17Q96AE7 1141 aa16.42■□□□□ 0.22
HDDC2-210ENST00000609574 NRSN2Q9GZP1 204 aa16.42■□□□□ 0.22
HDDC2-210ENST00000609574 NEUROG2Q9H2A3 272 aa16.42■□□□□ 0.22
HDDC2-210ENST00000609574 FZD4Q9ULV1 537 aa16.42■□□□□ 0.22
HDDC2-210ENST00000609574 KNTC1P50748 2209 aa16.42■□□□□ 0.22
HDDC2-210ENST00000609574 A0A1W2PP55 124 aa16.41■□□□□ 0.22
HDDC2-210ENST00000609574 CAPN8A6NHC0 703 aa16.41■□□□□ 0.22
HDDC2-210ENST00000609574 YJEFN3A6XGL0 299 aa16.41■□□□□ 0.22
HDDC2-210ENST00000609574 E7ENQ6 273 aa16.41■□□□□ 0.22
HDDC2-210ENST00000609574 MID1O15344 667 aa16.41■□□□□ 0.22
HDDC2-210ENST00000609574 MSI1O43347 362 aaKnown RBP16.41■□□□□ 0.22
HDDC2-210ENST00000609574 SIN3BO75182 1162 aa16.41■□□□□ 0.22
HDDC2-210ENST00000609574 RHOBTB3O94955 611 aa16.41■□□□□ 0.22
HDDC2-210ENST00000609574 CENPBP07199 599 aaPredicted RBP16.41■□□□□ 0.22
HDDC2-210ENST00000609574 VDRP11473 427 aa16.41■□□□□ 0.22
HDDC2-210ENST00000609574 PFKFB1P16118 471 aa16.41■□□□□ 0.22
HDDC2-210ENST00000609574 SLC8A1P32418 973 aa16.41■□□□□ 0.22
HDDC2-210ENST00000609574 EIF2S3P41091 472 aaKnown RBP16.41■□□□□ 0.22
HDDC2-210ENST00000609574 SYKP43405 635 aa16.41■□□□□ 0.22
HDDC2-210ENST00000609574 TBX4P57082 545 aa16.41■□□□□ 0.22
HDDC2-210ENST00000609574 TCERG1LQ5VWI1 586 aa16.41■□□□□ 0.22
HDDC2-210ENST00000609574 RFWD3Q6PCD5 774 aa16.41■□□□□ 0.22
HDDC2-210ENST00000609574 MMAAQ8IVH4 418 aaKnown RBP16.41■□□□□ 0.22
HDDC2-210ENST00000609574 CARNMT1Q8N4J0 409 aa16.41■□□□□ 0.22
HDDC2-210ENST00000609574 OR14C36Q8NHC7 312 aa16.41■□□□□ 0.22
HDDC2-210ENST00000609574 SAP25Q8TEE9 199 aa16.41■□□□□ 0.22
HDDC2-210ENST00000609574 IRGQQ8WZA9 623 aa16.41■□□□□ 0.22
HDDC2-210ENST00000609574 SEMA4DQ92854 862 aa16.41■□□□□ 0.22
HDDC2-210ENST00000609574 SERAC1Q96JX3 654 aa16.41■□□□□ 0.22
HDDC2-210ENST00000609574 TBC1D3DA0A087WVF3 549 aa16.4■□□□□ 0.22
HDDC2-210ENST00000609574 TBC1D3IA0A087WXS9 549 aa16.4■□□□□ 0.22
HDDC2-210ENST00000609574 TBC1D3EA0A087X179 549 aa16.4■□□□□ 0.22
HDDC2-210ENST00000609574 TBC1D3KA0A087X1G2 549 aa16.4■□□□□ 0.22
HDDC2-210ENST00000609574 EDDM13A0A1B0GTR0 161 aa16.4■□□□□ 0.22
HDDC2-210ENST00000609574 TBC1D3FA6NER0 549 aaPredicted RBP16.4■□□□□ 0.22
HDDC2-210ENST00000609574 TBC1D3LB9A6J9 549 aa16.4■□□□□ 0.22
HDDC2-210ENST00000609574 TLR4O00206 839 aa16.4■□□□□ 0.22
HDDC2-210ENST00000609574 ATXN7O15265 892 aaPredicted RBP16.4■□□□□ 0.22
HDDC2-210ENST00000609574 ADH1BP00325 375 aa16.4■□□□□ 0.22
HDDC2-210ENST00000609574 SRPRAP08240 638 aaKnown RBP16.4■□□□□ 0.22
HDDC2-210ENST00000609574 TBC1D3HP0C7X1 549 aa16.4■□□□□ 0.22
HDDC2-210ENST00000609574 GOT1P17174 413 aa16.4■□□□□ 0.22
HDDC2-210ENST00000609574 ACTN2P35609 894 aa16.4■□□□□ 0.22
HDDC2-210ENST00000609574 CSKP41240 450 aa16.4■□□□□ 0.22
HDDC2-210ENST00000609574 DNM1Q05193 864 aaKnown RBP16.4■□□□□ 0.22
HDDC2-210ENST00000609574 DNAJC3Q13217 504 aa16.4■□□□□ 0.22
HDDC2-210ENST00000609574 CUL2Q13617 745 aa16.4■□□□□ 0.22
HDDC2-210ENST00000609574 EDRF1Q3B7T1 1238 aa16.4■□□□□ 0.22
HDDC2-210ENST00000609574 HES3Q5TGS1 186 aa16.4■□□□□ 0.22
HDDC2-210ENST00000609574 TBC1D3GQ6DHY5 549 aa16.4■□□□□ 0.22
HDDC2-210ENST00000609574 TBC1D3CQ6IPX1 549 aa16.4■□□□□ 0.22
HDDC2-210ENST00000609574 ZNF605Q86T29 641 aa16.4■□□□□ 0.22
HDDC2-210ENST00000609574 PRPF39Q86UA1 669 aaKnown RBP16.4■□□□□ 0.22
HDDC2-210ENST00000609574 TBC1D3Q8IZP1 549 aaPredicted RBP16.4■□□□□ 0.22
HDDC2-210ENST00000609574 SCML4Q8N228 414 aa16.4■□□□□ 0.22
HDDC2-210ENST00000609574 ADAM32Q8TC27 787 aa16.4■□□□□ 0.22
HDDC2-210ENST00000609574 FGF11Q92914 225 aa16.4■□□□□ 0.22
HDDC2-210ENST00000609574 CRELD1Q96HD1 420 aa16.4■□□□□ 0.22
HDDC2-210ENST00000609574 ORAI3Q9BRQ5 295 aa16.4■□□□□ 0.22
HDDC2-210ENST00000609574 ADAMTS1Q9UHI8 967 aa16.4■□□□□ 0.22
HDDC2-210ENST00000609574 PTPRBP23467 1997 aa16.4■□□□□ 0.22
HDDC2-210ENST00000609574 FLNBO75369 2602 aaKnown RBP16.39■□□□□ 0.21
HDDC2-210ENST00000609574 GOLGA6L7A0A1B0GV03 622 aa16.39■□□□□ 0.21
HDDC2-210ENST00000609574 TULP2O00295 520 aa16.39■□□□□ 0.21
HDDC2-210ENST00000609574 C5AR1P21730 350 aa16.39■□□□□ 0.21
HDDC2-210ENST00000609574 TBXAS1P24557 533 aaPredicted RBP16.39■□□□□ 0.21
HDDC2-210ENST00000609574 ITPKBP27987 946 aa16.39■□□□□ 0.21
HDDC2-210ENST00000609574 DAOAP59103 153 aa16.39■□□□□ 0.21
HDDC2-210ENST00000609574 ARID5BQ14865 1188 aa16.39■□□□□ 0.21
HDDC2-210ENST00000609574 MSANTD2Q6P1R3 559 aa16.39■□□□□ 0.21
HDDC2-210ENST00000609574 FCRL3Q96P31 734 aaPredicted RBP16.39■□□□□ 0.21
HDDC2-210ENST00000609574 TSG101Q99816 390 aa16.39■□□□□ 0.21
HDDC2-210ENST00000609574 MTG2Q9H4K7 406 aa16.39■□□□□ 0.21
HDDC2-210ENST00000609574 PRORYQ9H606 182 aa16.39■□□□□ 0.21
HDDC2-210ENST00000609574 ERVMER34-1Q9H9K5 563 aa16.39■□□□□ 0.21
HDDC2-210ENST00000609574 ERVW-1Q9UQF0 538 aa16.39■□□□□ 0.21
HDDC2-210ENST00000609574 CKAP5Q14008 2032 aa16.38■□□□□ 0.21
HDDC2-210ENST00000609574 CELSR3Q9NYQ7 3312 aa16.38■□□□□ 0.21
HDDC2-210ENST00000609574 FBXO21O94952 628 aa16.38■□□□□ 0.21
HDDC2-210ENST00000609574 IL1BP01584 269 aa16.38■□□□□ 0.21
HDDC2-210ENST00000609574 CKMT2P17540 419 aa16.38■□□□□ 0.21
HDDC2-210ENST00000609574 EPHA8P29322 1005 aaPredicted RBP16.38■□□□□ 0.21
HDDC2-210ENST00000609574 NUDT1P36639 197 aa16.38■□□□□ 0.21
HDDC2-210ENST00000609574 PSMD8P48556 350 aa16.38■□□□□ 0.21
HDDC2-210ENST00000609574 ACADVLP49748 655 aa16.38■□□□□ 0.21
HDDC2-210ENST00000609574 SGSHP51688 502 aa16.38■□□□□ 0.21
HDDC2-210ENST00000609574 ECT2LQ008S8 904 aa16.38■□□□□ 0.21
HDDC2-210ENST00000609574 E2F1Q01094 437 aa16.38■□□□□ 0.21
HDDC2-210ENST00000609574 STAT4Q14765 748 aa16.38■□□□□ 0.21
HDDC2-210ENST00000609574 RTP5Q14D33 572 aa16.38■□□□□ 0.21
HDDC2-210ENST00000609574 DCAF17Q5H9S7 520 aaPredicted RBP16.38■□□□□ 0.21
HDDC2-210ENST00000609574 C9orf64Q5T6V5 341 aa16.38■□□□□ 0.21
HDDC2-210ENST00000609574 BHLHA9Q7RTU4 235 aa16.38■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 8.7 ms