RNA–Protein interactions for RNA: ENST00000608532.1

HDDC2-207, Transcript of HD domain containing 2, humanhuman

TSL 3

Gene HDDC2, Length 553 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC2-207ENST00000608532 CACNA1IQ9P0X4 2223 aa4.95□□□□□ -1.62
HDDC2-207ENST00000608532 KIR2DS5A0A0G2JLQ3 304 aa4.95□□□□□ -1.62
HDDC2-207ENST00000608532 KIR2DS3K7RE56 304 aa4.95□□□□□ -1.62
HDDC2-207ENST00000608532 TLX3O43711 291 aaPredicted RBP4.95□□□□□ -1.62
HDDC2-207ENST00000608532 TNFRSF1BP20333 461 aa4.95□□□□□ -1.62
HDDC2-207ENST00000608532 SYCP2LQ5T4T6 812 aa4.95□□□□□ -1.62
HDDC2-207ENST00000608532 DAB2IPQ5VWQ8 1189 aa4.95□□□□□ -1.62
HDDC2-207ENST00000608532 NUGGCQ68CJ6 796 aa4.95□□□□□ -1.62
HDDC2-207ENST00000608532 HMBOX1Q6NT76 420 aa4.95□□□□□ -1.62
HDDC2-207ENST00000608532 SAMD14Q8IZD0 417 aaPredicted RBP4.95□□□□□ -1.62
HDDC2-207ENST00000608532 ZNF527Q8NB42 609 aa4.95□□□□□ -1.62
HDDC2-207ENST00000608532 MECRQ9BV79 373 aa4.95□□□□□ -1.62
HDDC2-207ENST00000608532 LAMP3Q9UQV4 416 aa4.95□□□□□ -1.62
HDDC2-207ENST00000608532 LRCH1Q9Y2L9 728 aa4.95□□□□□ -1.62
HDDC2-207ENST00000608532 ZNF335Q9H4Z2 1342 aaPredicted RBP4.95□□□□□ -1.62
HDDC2-207ENST00000608532 FFAR2O15552 330 aa4.94□□□□□ -1.62
HDDC2-207ENST00000608532 EPN2O95208 641 aa4.94□□□□□ -1.62
HDDC2-207ENST00000608532 CHRNB1P11230 501 aa4.94□□□□□ -1.62
HDDC2-207ENST00000608532 FAM3BP58499 235 aaPredicted RBP4.94□□□□□ -1.62
HDDC2-207ENST00000608532 TLE3Q04726 772 aa4.94□□□□□ -1.62
HDDC2-207ENST00000608532 SF3A3Q12874 501 aaKnown RBP eCLIP4.94□□□□□ -1.62
HDDC2-207ENST00000608532 SPARCL1Q14515 664 aa4.94□□□□□ -1.62
HDDC2-207ENST00000608532 PTGR1Q14914 329 aa4.94□□□□□ -1.62
HDDC2-207ENST00000608532 ZNF549Q6P9A3 640 aa4.94□□□□□ -1.62
HDDC2-207ENST00000608532 CYB5R4Q7L1T6 521 aa4.94□□□□□ -1.62
HDDC2-207ENST00000608532 DDIASQ8IXT1 998 aa4.94□□□□□ -1.62
HDDC2-207ENST00000608532 ADGRF3Q8IZF5 1079 aa4.94□□□□□ -1.62
HDDC2-207ENST00000608532 SVIPQ8NHG7 77 aa4.94□□□□□ -1.62
HDDC2-207ENST00000608532 HMGB4Q8WW32 186 aa4.94□□□□□ -1.62
HDDC2-207ENST00000608532 ADAD1Q96M93 576 aaKnown RBP4.94□□□□□ -1.62
HDDC2-207ENST00000608532 SORBS1Q9BX66 1292 aaKnown RBP4.94□□□□□ -1.62
HDDC2-207ENST00000608532 TMEM120AQ9BXJ8 343 aa4.94□□□□□ -1.62
HDDC2-207ENST00000608532 NFU1Q9UMS0 254 aa4.94□□□□□ -1.62
HDDC2-207ENST00000608532 PCDHA12Q9UN75 941 aa4.94□□□□□ -1.62
HDDC2-207ENST00000608532 ZBTB1Q9Y2K1 713 aa4.94□□□□□ -1.62
HDDC2-207ENST00000608532 A0A0G2JK05 382 aa4.93□□□□□ -1.62
HDDC2-207ENST00000608532 CXorf65A6NEN9 183 aa4.93□□□□□ -1.62
HDDC2-207ENST00000608532 GOLGA6L3A6NEY3 463 aa4.93□□□□□ -1.62
HDDC2-207ENST00000608532 C3orf70A6NLC5 250 aaPredicted RBP4.93□□□□□ -1.62
HDDC2-207ENST00000608532 A6NNC1 897 aa4.93□□□□□ -1.62
HDDC2-207ENST00000608532 LGALS16A8MUM7 142 aa4.93□□□□□ -1.62
HDDC2-207ENST00000608532 OAZ2O95190 189 aa4.93□□□□□ -1.62
HDDC2-207ENST00000608532 ALPLP05186 524 aa4.93□□□□□ -1.62
HDDC2-207ENST00000608532 GYS1P13807 737 aa4.93□□□□□ -1.62
HDDC2-207ENST00000608532 TKTP29401 623 aaKnown RBP4.93□□□□□ -1.62
HDDC2-207ENST00000608532 SERPINB3P29508 390 aa4.93□□□□□ -1.62
HDDC2-207ENST00000608532 FOXL2P58012 376 aa4.93□□□□□ -1.62
HDDC2-207ENST00000608532 RBM6P78332 1123 aaKnown RBP4.93□□□□□ -1.62
HDDC2-207ENST00000608532 GALNT3Q14435 633 aa4.93□□□□□ -1.62
HDDC2-207ENST00000608532 ARL13AQ5H913 290 aaPredicted RBP4.93□□□□□ -1.62
HDDC2-207ENST00000608532 KIAA1755Q5JYT7 1200 aa4.93□□□□□ -1.62
HDDC2-207ENST00000608532 PIK3CD-AS1Q5SR53 167 aa4.93□□□□□ -1.62
HDDC2-207ENST00000608532 C10orf76Q5T2E6 689 aa4.93□□□□□ -1.62
HDDC2-207ENST00000608532 LCE1AQ5T7P2 110 aa4.93□□□□□ -1.62
HDDC2-207ENST00000608532 ATPAF1Q5TC12 328 aaPredicted RBP4.93□□□□□ -1.62
HDDC2-207ENST00000608532 ISM2Q6H9L7 571 aa4.93□□□□□ -1.62
HDDC2-207ENST00000608532 PGBD2Q6P3X8 592 aa4.93□□□□□ -1.62
HDDC2-207ENST00000608532 ZNF517Q6ZMY9 492 aaPredicted RBP4.93□□□□□ -1.62
HDDC2-207ENST00000608532 BHLHA9Q7RTU4 235 aa4.93□□□□□ -1.62
HDDC2-207ENST00000608532 TRAPPC11Q7Z392 1133 aa4.93□□□□□ -1.62
HDDC2-207ENST00000608532 MORC1Q86VD1 984 aa4.93□□□□□ -1.62
HDDC2-207ENST00000608532 ZDHHC17Q8IUH5 632 aa4.93□□□□□ -1.62
HDDC2-207ENST00000608532 OR52N4Q8NGI2 321 aa4.93□□□□□ -1.62
HDDC2-207ENST00000608532 FAM71BQ8TC56 605 aa4.93□□□□□ -1.62
HDDC2-207ENST00000608532 CLEC4CQ8WTT0 213 aa4.93□□□□□ -1.62
HDDC2-207ENST00000608532 TMEM174Q8WUU8 243 aa4.93□□□□□ -1.62
HDDC2-207ENST00000608532 IP6K1Q92551 441 aa4.93□□□□□ -1.62
HDDC2-207ENST00000608532 CENPIQ92674 756 aaPredicted RBP4.93□□□□□ -1.62
HDDC2-207ENST00000608532 MSI2Q96DH6 328 aaKnown RBP4.93□□□□□ -1.62
HDDC2-207ENST00000608532 BRD8Q9H0E9 1235 aa4.93□□□□□ -1.62
HDDC2-207ENST00000608532 TP63Q9H3D4 680 aaPredicted RBP4.93□□□□□ -1.62
HDDC2-207ENST00000608532 FBXO4Q9UKT5 387 aa4.93□□□□□ -1.62
HDDC2-207ENST00000608532 TNFSF13BQ9Y275 285 aa4.93□□□□□ -1.62
HDDC2-207ENST00000608532 LMTK3Q96Q04 1460 aa4.93□□□□□ -1.62
HDDC2-207ENST00000608532 A0A087WV62 115 aa4.92□□□□□ -1.62
HDDC2-207ENST00000608532 AGAP5A6NIR3 686 aa4.92□□□□□ -1.62
HDDC2-207ENST00000608532 KCNAB3O43448 404 aa4.92□□□□□ -1.62
HDDC2-207ENST00000608532 TOMM40O96008 361 aa4.92□□□□□ -1.62
HDDC2-207ENST00000608532 WNT1P04628 370 aa4.92□□□□□ -1.62
HDDC2-207ENST00000608532 HTR6P50406 440 aa4.92□□□□□ -1.62
HDDC2-207ENST00000608532 TMEM88Q6PEY1 159 aa4.92□□□□□ -1.62
HDDC2-207ENST00000608532 PAQR4Q8N4S7 273 aaPredicted RBP4.92□□□□□ -1.62
HDDC2-207ENST00000608532 ASB5Q8WWX0 329 aa4.92□□□□□ -1.62
HDDC2-207ENST00000608532 KAT2AQ92830 837 aa4.92□□□□□ -1.62
HDDC2-207ENST00000608532 ZNF419Q96HQ0 510 aaPredicted RBP4.92□□□□□ -1.62
HDDC2-207ENST00000608532 MLXIPQ9HAP2 919 aa4.92□□□□□ -1.62
HDDC2-207ENST00000608532 SEPSECSQ9HD40 501 aaKnown RBP4.92□□□□□ -1.62
HDDC2-207ENST00000608532 FZD3Q9NPG1 666 aa4.92□□□□□ -1.62
HDDC2-207ENST00000608532 CNTN6Q9UQ52 1028 aa4.92□□□□□ -1.62
HDDC2-207ENST00000608532 SLC38A8A6NNN8 435 aa4.91□□□□□ -1.62
HDDC2-207ENST00000608532 H0YGN5 161 aa4.91□□□□□ -1.62
HDDC2-207ENST00000608532 MSI1O43347 362 aaKnown RBP4.91□□□□□ -1.62
HDDC2-207ENST00000608532 CYP3A4P08684 503 aa4.91□□□□□ -1.62
HDDC2-207ENST00000608532 FGF2P09038 288 aa4.91□□□□□ -1.62
HDDC2-207ENST00000608532 SETSIPP0DME0 302 aa4.91□□□□□ -1.62
HDDC2-207ENST00000608532 CDC25AP30304 524 aa4.91□□□□□ -1.62
HDDC2-207ENST00000608532 TNFAIP2Q03169 654 aa4.91□□□□□ -1.62
HDDC2-207ENST00000608532 PMPCAQ10713 525 aa4.91□□□□□ -1.62
HDDC2-207ENST00000608532 RAPGEF1Q13905 1077 aa4.91□□□□□ -1.62
HDDC2-207ENST00000608532 PFKFB4Q16877 469 aa4.91□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms