RNA–Protein interactions for RNA: ENST00000607482.5

CTSA-217, Transcript of cathepsin A, humanhuman

TSL 3

Gene CTSA, Length 403 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-217ENST00000607482 OLFML1Q6UWY5 402 aa19.87■□□□□ 0.77
CTSA-217ENST00000607482 SLC26A9Q7LBE3 791 aa19.87■□□□□ 0.77
CTSA-217ENST00000607482 FAM124AQ86V42 546 aa19.87■□□□□ 0.77
CTSA-217ENST00000607482 ZNF366Q8N895 744 aa19.87■□□□□ 0.77
CTSA-217ENST00000607482 NEK11Q8NG66 645 aa19.87■□□□□ 0.77
CTSA-217ENST00000607482 OR2T3Q8NH03 318 aa19.87■□□□□ 0.77
CTSA-217ENST00000607482 GANCQ8TET4 914 aa19.87■□□□□ 0.77
CTSA-217ENST00000607482 TOE1Q96GM8 510 aaKnown RBP19.87■□□□□ 0.77
CTSA-217ENST00000607482 PRICKLE1Q96MT3 831 aaPredicted RBP19.87■□□□□ 0.77
CTSA-217ENST00000607482 RPRD1AQ96P16 312 aaPredicted RBP19.87■□□□□ 0.77
CTSA-217ENST00000607482 PPP1R9BQ96SB3 815 aa19.87■□□□□ 0.77
CTSA-217ENST00000607482 NUP58Q9BVL2 599 aa19.87■□□□□ 0.77
CTSA-217ENST00000607482 NLRC4Q9NPP4 1024 aa19.87■□□□□ 0.77
CTSA-217ENST00000607482 XPO7Q9UIA9 1087 aaKnown RBP19.87■□□□□ 0.77
CTSA-217ENST00000607482 MED19A0JLT2 244 aaPredicted RBP19.86■□□□□ 0.77
CTSA-217ENST00000607482 LNP1A1A4G5 178 aa19.86■□□□□ 0.77
CTSA-217ENST00000607482 GOLGA8SH3BPF8 625 aa19.86■□□□□ 0.77
CTSA-217ENST00000607482 RNASEH1O60930 286 aaKnown RBP19.86■□□□□ 0.77
CTSA-217ENST00000607482 DNTTP04053 509 aa19.86■□□□□ 0.77
CTSA-217ENST00000607482 HOXD12P35452 270 aa19.86■□□□□ 0.77
CTSA-217ENST00000607482 NNMTP40261 264 aa19.86■□□□□ 0.77
CTSA-217ENST00000607482 CSKP41240 450 aa19.86■□□□□ 0.77
CTSA-217ENST00000607482 MATKP42679 507 aa19.86■□□□□ 0.77
CTSA-217ENST00000607482 MAPK8P45983 427 aa19.86■□□□□ 0.77
CTSA-217ENST00000607482 TPMTP51580 245 aa19.86■□□□□ 0.77
CTSA-217ENST00000607482 IRX4P78413 519 aa19.86■□□□□ 0.77
CTSA-217ENST00000607482 DUOXA1Q1HG43 343 aa19.86■□□□□ 0.77
CTSA-217ENST00000607482 METTL3Q86U44 580 aaKnown RBP19.86■□□□□ 0.77
CTSA-217ENST00000607482 WFDC5Q8TCV5 224 aa19.86■□□□□ 0.77
CTSA-217ENST00000607482 GTPBP2Q9BX10 602 aaKnown RBP19.86■□□□□ 0.77
CTSA-217ENST00000607482 GPR174Q9BXC1 333 aa19.86■□□□□ 0.77
CTSA-217ENST00000607482 NAA15Q9BXJ9 866 aaKnown RBP19.86■□□□□ 0.77
CTSA-217ENST00000607482 WDCPQ9H6R7 721 aa19.86■□□□□ 0.77
CTSA-217ENST00000607482 FBRSQ9HAH7 460 aa19.86■□□□□ 0.77
CTSA-217ENST00000607482 ITM2CQ9NQX7 267 aa19.86■□□□□ 0.77
CTSA-217ENST00000607482 PILRBQ9UKJ0 227 aa19.86■□□□□ 0.77
CTSA-217ENST00000607482 IGLV3-25P01717 112 aa19.85■□□□□ 0.77
CTSA-217ENST00000607482 STAT1P42224 750 aa19.85■□□□□ 0.77
CTSA-217ENST00000607482 SULT1E1P49888 294 aa19.85■□□□□ 0.77
CTSA-217ENST00000607482 COPB1P53618 953 aaKnown RBP19.85■□□□□ 0.77
CTSA-217ENST00000607482 OXCT1P55809 520 aa19.85■□□□□ 0.77
CTSA-217ENST00000607482 PITX1P78337 314 aaPredicted RBP19.85■□□□□ 0.77
CTSA-217ENST00000607482 SFSWAPQ12872 951 aaKnown RBP19.85■□□□□ 0.77
CTSA-217ENST00000607482 TTC31Q49AM3 519 aaPredicted RBP19.85■□□□□ 0.77
CTSA-217ENST00000607482 NAA35Q5VZE5 725 aa19.85■□□□□ 0.77
CTSA-217ENST00000607482 KIAA0907Q7Z7F0 614 aaPredicted RBP19.85■□□□□ 0.77
CTSA-217ENST00000607482 NOP9Q86U38 636 aaKnown RBP19.85■□□□□ 0.77
CTSA-217ENST00000607482 ZNF677Q86XU0 584 aa19.85■□□□□ 0.77
CTSA-217ENST00000607482 CPA5Q8WXQ8 436 aa19.85■□□□□ 0.77
CTSA-217ENST00000607482 SIK2Q9H0K1 926 aa19.85■□□□□ 0.77
CTSA-217ENST00000607482 MIR1-1HGQ9H1L0 117 aa19.85■□□□□ 0.77
CTSA-217ENST00000607482 TMEM245Q9H330 911 aa19.85■□□□□ 0.77
CTSA-217ENST00000607482 CD248Q9HCU0 757 aa19.85■□□□□ 0.77
CTSA-217ENST00000607482 TMEM74BQ9NUR3 256 aa19.85■□□□□ 0.77
CTSA-217ENST00000607482 SUSD2Q9UGT4 822 aa19.85■□□□□ 0.77
CTSA-217ENST00000607482 EVLQ9UI08 416 aaPredicted RBP19.85■□□□□ 0.77
CTSA-217ENST00000607482 SLC6A14Q9UN76 642 aa19.85■□□□□ 0.77
CTSA-217ENST00000607482 DAAM1Q9Y4D1 1078 aa19.85■□□□□ 0.77
CTSA-217ENST00000607482 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP19.84■□□□□ 0.77
CTSA-217ENST00000607482 F9P00740 461 aa19.84■□□□□ 0.77
CTSA-217ENST00000607482 MMEP08473 750 aa19.84■□□□□ 0.77
CTSA-217ENST00000607482 ZNF18P17022 549 aa19.84■□□□□ 0.77
CTSA-217ENST00000607482 SOX5P35711 763 aa19.84■□□□□ 0.77
CTSA-217ENST00000607482 KLK7P49862 253 aa19.84■□□□□ 0.77
CTSA-217ENST00000607482 DEUP1Q05D60 604 aa19.84■□□□□ 0.77
CTSA-217ENST00000607482 ZNF177Q13360 481 aaPredicted RBP19.84■□□□□ 0.77
CTSA-217ENST00000607482 CAMK2GQ13555 558 aaPredicted RBP19.84■□□□□ 0.77
CTSA-217ENST00000607482 PITRM1Q5JRX3 1037 aa19.84■□□□□ 0.77
CTSA-217ENST00000607482 MMS22LQ6ZRQ5 1243 aa19.84■□□□□ 0.77
CTSA-217ENST00000607482 ZNF397Q8NF99 534 aaPredicted RBP19.84■□□□□ 0.77
CTSA-217ENST00000607482 SNX19Q92543 992 aa19.84■□□□□ 0.77
CTSA-217ENST00000607482 CD93Q9NPY3 652 aa19.84■□□□□ 0.77
CTSA-217ENST00000607482 SEPT11Q9NVA2 429 aaKnown RBP19.84■□□□□ 0.77
CTSA-217ENST00000607482 TMEM51Q9NW97 253 aa19.84■□□□□ 0.77
CTSA-217ENST00000607482 NCKAP1Q9Y2A7 1128 aa19.84■□□□□ 0.77
CTSA-217ENST00000607482 SYPP08247 313 aa19.83■□□□□ 0.77
CTSA-217ENST00000607482 COPAP53621 1224 aa19.83■□□□□ 0.77
CTSA-217ENST00000607482 ECT2LQ008S8 904 aa19.83■□□□□ 0.77
CTSA-217ENST00000607482 TYRO3Q06418 890 aa19.83■□□□□ 0.77
CTSA-217ENST00000607482 SLC12A1Q13621 1099 aa19.83■□□□□ 0.77
CTSA-217ENST00000607482 AUHQ13825 339 aaKnown RBP19.83■□□□□ 0.77
CTSA-217ENST00000607482 PTPRNQ16849 979 aa19.83■□□□□ 0.77
CTSA-217ENST00000607482 PLEKHG6Q3KR16 790 aa19.83■□□□□ 0.77
CTSA-217ENST00000607482 FSCBQ5H9T9 825 aa19.83■□□□□ 0.77
CTSA-217ENST00000607482 DPY19L2P1Q6NXN4 242 aa19.83■□□□□ 0.77
CTSA-217ENST00000607482 SLC23A3Q6PIS1 610 aa19.83■□□□□ 0.77
CTSA-217ENST00000607482 LRRC31Q6UY01 552 aa19.83■□□□□ 0.77
CTSA-217ENST00000607482 CCAR2Q8N163 923 aaKnown RBP19.83■□□□□ 0.77
CTSA-217ENST00000607482 HDDC3Q8N4P3 179 aa19.83■□□□□ 0.77
CTSA-217ENST00000607482 AOPEPQ8N6M6 819 aa19.83■□□□□ 0.77
CTSA-217ENST00000607482 TTC17Q96AE7 1141 aa19.83■□□□□ 0.77
CTSA-217ENST00000607482 MYEOVQ96EZ4 313 aa19.83■□□□□ 0.77
CTSA-217ENST00000607482 ZNF419Q96HQ0 510 aaPredicted RBP19.83■□□□□ 0.77
CTSA-217ENST00000607482 PRSS16Q9NQE7 514 aa19.83■□□□□ 0.77
CTSA-217ENST00000607482 WSB2Q9NYS7 404 aaPredicted RBP19.83■□□□□ 0.77
CTSA-217ENST00000607482 USP36Q9P275 1121 aaKnown RBP19.83■□□□□ 0.77
CTSA-217ENST00000607482 LIMA1Q9UHB6 759 aaKnown RBP19.83■□□□□ 0.77
CTSA-217ENST00000607482 VANGL2Q9ULK5 521 aa19.83■□□□□ 0.77
CTSA-217ENST00000607482 ERVW-1Q9UQF0 538 aa19.83■□□□□ 0.77
CTSA-217ENST00000607482 DNAH14Q0VDD8 3507 aa19.83■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms