RNA–Protein interactions for RNA: ENST00000604599.1

CDCA3-212, Transcript of cell division cycle associated 3, humanhuman

TSL 2

Gene CDCA3, Length 2,917 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-212ENST00000604599 PCDHA11Q9Y5I1 949 aa12.75□□□□□ -0.37
CDCA3-212ENST00000604599 CDY2AQ9Y6F7 541 aa12.75□□□□□ -0.37
CDCA3-212ENST00000604599 CDY1Q9Y6F8 540 aa12.75□□□□□ -0.37
CDCA3-212ENST00000604599 WDR27A2RRH5 827 aa12.74□□□□□ -0.37
CDCA3-212ENST00000604599 G3V3G9 751 aa12.74□□□□□ -0.37
CDCA3-212ENST00000604599 BCAS2O75934 225 aaPredicted RBP12.74□□□□□ -0.37
CDCA3-212ENST00000604599 ATE1O95260 518 aa12.74□□□□□ -0.37
CDCA3-212ENST00000604599 BCAP31P51572 246 aa12.74□□□□□ -0.37
CDCA3-212ENST00000604599 CD300CQ08708 224 aa12.74□□□□□ -0.37
CDCA3-212ENST00000604599 ART3Q13508 389 aa12.74□□□□□ -0.37
CDCA3-212ENST00000604599 CRY2Q49AN0 593 aa12.74□□□□□ -0.37
CDCA3-212ENST00000604599 MTX3Q5HYI7 312 aa12.74□□□□□ -0.37
CDCA3-212ENST00000604599 DCAF8Q5TAQ9 597 aa12.74□□□□□ -0.37
CDCA3-212ENST00000604599 CENPSQ8N2Z9 138 aa12.74□□□□□ -0.37
CDCA3-212ENST00000604599 TDRD5Q8NAT2 981 aaKnown RBP12.74□□□□□ -0.37
CDCA3-212ENST00000604599 PLEKHA8Q96JA3 519 aa12.74□□□□□ -0.37
CDCA3-212ENST00000604599 ZNF597Q96LX8 424 aa12.74□□□□□ -0.37
CDCA3-212ENST00000604599 ZNF518BQ9C0D4 1074 aa12.74□□□□□ -0.37
CDCA3-212ENST00000604599 CYP26B1Q9NR63 512 aa12.74□□□□□ -0.37
CDCA3-212ENST00000604599 GPATCH2LQ9NWQ4 482 aa12.74□□□□□ -0.37
CDCA3-212ENST00000604599 DCDC2Q9UHG0 476 aa12.74□□□□□ -0.37
CDCA3-212ENST00000604599 TRIM17Q9Y577 477 aa12.74□□□□□ -0.37
CDCA3-212ENST00000604599 PCDHB12Q9Y5F1 795 aa12.74□□□□□ -0.37
CDCA3-212ENST00000604599 SNX13Q9Y5W8 968 aa12.74□□□□□ -0.37
CDCA3-212ENST00000604599 ALDH2P05091 517 aa12.74□□□□□ -0.37
CDCA3-212ENST00000604599 GLDCP23378 1020 aa12.74□□□□□ -0.37
CDCA3-212ENST00000604599 TYK2P29597 1187 aa12.74□□□□□ -0.37
CDCA3-212ENST00000604599 PPARGP37231 505 aaPredicted RBP12.74□□□□□ -0.37
CDCA3-212ENST00000604599 ACADVLP49748 655 aa12.74□□□□□ -0.37
CDCA3-212ENST00000604599 C21orf59P57076 290 aa12.74□□□□□ -0.37
CDCA3-212ENST00000604599 MYL6P60660 151 aa12.74□□□□□ -0.37
CDCA3-212ENST00000604599 ESRRGP62508 458 aa12.74□□□□□ -0.37
CDCA3-212ENST00000604599 STXBP5Q5T5C0 1151 aa12.74□□□□□ -0.37
CDCA3-212ENST00000604599 RC3H1Q5TC82 1133 aaKnown RBP12.74□□□□□ -0.37
CDCA3-212ENST00000604599 C16orf87Q6PH81 154 aa12.74□□□□□ -0.37
CDCA3-212ENST00000604599 PQLC3Q8N755 202 aa12.74□□□□□ -0.37
CDCA3-212ENST00000604599 DDHD1Q8NEL9 900 aa12.74□□□□□ -0.37
CDCA3-212ENST00000604599 BORCS5Q969J3 196 aa12.74□□□□□ -0.37
CDCA3-212ENST00000604599 LRRC39Q96DD0 335 aa12.74□□□□□ -0.37
CDCA3-212ENST00000604599 CGRRF1Q99675 332 aa12.74□□□□□ -0.37
CDCA3-212ENST00000604599 HNRNPABQ99729 332 aaKnown RBP12.74□□□□□ -0.37
CDCA3-212ENST00000604599 GPATCH1Q9BRR8 931 aaKnown RBP12.74□□□□□ -0.37
CDCA3-212ENST00000604599 MSTO1Q9BUK6 570 aa12.74□□□□□ -0.37
CDCA3-212ENST00000604599 OSBPL11Q9BXB4 747 aa12.74□□□□□ -0.37
CDCA3-212ENST00000604599 POLR3FQ9H1D9 316 aaPredicted RBP12.74□□□□□ -0.37
CDCA3-212ENST00000604599 C20orf96Q9NUD7 363 aaPredicted RBP12.74□□□□□ -0.37
CDCA3-212ENST00000604599 CCPG1Q9ULG6 757 aa12.74□□□□□ -0.37
CDCA3-212ENST00000604599 A0A1W2PPW3 197 aa12.73□□□□□ -0.37
CDCA3-212ENST00000604599 J3QRK9 145 aa12.73□□□□□ -0.37
CDCA3-212ENST00000604599 GIPC1O14908 333 aa12.73□□□□□ -0.37
CDCA3-212ENST00000604599 BBOX1O75936 387 aa12.73□□□□□ -0.37
CDCA3-212ENST00000604599 HMGCRP04035 888 aa12.73□□□□□ -0.37
CDCA3-212ENST00000604599 CD247P20963 164 aa12.73□□□□□ -0.37
CDCA3-212ENST00000604599 POLR2BP30876 1174 aaKnown RBP12.73□□□□□ -0.37
CDCA3-212ENST00000604599 TMED10P49755 219 aaKnown RBP12.73□□□□□ -0.37
CDCA3-212ENST00000604599 BSPRYQ5W0U4 402 aa12.73□□□□□ -0.37
CDCA3-212ENST00000604599 NANOGP8Q6NSW7 305 aa12.73□□□□□ -0.37
CDCA3-212ENST00000604599 TRIM50Q86XT4 487 aa12.73□□□□□ -0.37
CDCA3-212ENST00000604599 PGAM4Q8N0Y7 254 aa12.73□□□□□ -0.37
CDCA3-212ENST00000604599 PLD5Q8N7P1 536 aa12.73□□□□□ -0.37
CDCA3-212ENST00000604599 FBXL8Q96CD0 374 aa12.73□□□□□ -0.37
CDCA3-212ENST00000604599 NPAS2Q99743 824 aa12.73□□□□□ -0.37
CDCA3-212ENST00000604599 NEURL2Q9BR09 285 aa12.73□□□□□ -0.37
CDCA3-212ENST00000604599 TARS2Q9BW92 718 aaKnown RBP12.73□□□□□ -0.37
CDCA3-212ENST00000604599 MTMR12Q9C0I1 747 aa12.73□□□□□ -0.37
CDCA3-212ENST00000604599 PCDHAC1Q9H158 963 aa12.73□□□□□ -0.37
CDCA3-212ENST00000604599 CLK4Q9HAZ1 481 aaKnown RBP12.73□□□□□ -0.37
CDCA3-212ENST00000604599 MOCS1Q9NZB8 636 aa12.73□□□□□ -0.37
CDCA3-212ENST00000604599 ADA2Q9NZK5 511 aa12.73□□□□□ -0.37
CDCA3-212ENST00000604599 SPATA7Q9P0W8 599 aa12.73□□□□□ -0.37
CDCA3-212ENST00000604599 GABBR1Q9UBS5 961 aa12.73□□□□□ -0.37
CDCA3-212ENST00000604599 PPP1R1BQ9UD71 204 aaPredicted RBP12.73□□□□□ -0.37
CDCA3-212ENST00000604599 UBIAD1Q9Y5Z9 338 aa12.73□□□□□ -0.37
CDCA3-212ENST00000604599 QSER1Q2KHR3 1735 aa12.73□□□□□ -0.37
CDCA3-212ENST00000604599 TESPA1A2RU30 521 aaPredicted RBP12.73□□□□□ -0.37
CDCA3-212ENST00000604599 ACOT8O14734 319 aa12.73□□□□□ -0.37
CDCA3-212ENST00000604599 WDR46O15213 610 aaKnown RBP12.73□□□□□ -0.37
CDCA3-212ENST00000604599 VAPBO95292 243 aa12.73□□□□□ -0.37
CDCA3-212ENST00000604599 ERBB2P04626 1255 aa12.73□□□□□ -0.37
CDCA3-212ENST00000604599 CAPNS1P04632 268 aa12.73□□□□□ -0.37
CDCA3-212ENST00000604599 CHRNGP07510 517 aa12.73□□□□□ -0.37
CDCA3-212ENST00000604599 GSTT2P0CG29 244 aa12.73□□□□□ -0.37
CDCA3-212ENST00000604599 GSTT2BP0CG30 244 aa12.73□□□□□ -0.37
CDCA3-212ENST00000604599 UGT1A6P19224 532 aa12.73□□□□□ -0.37
CDCA3-212ENST00000604599 UGT1A1P22309 533 aa12.73□□□□□ -0.37
CDCA3-212ENST00000604599 UGT1A4P22310 534 aa12.73□□□□□ -0.37
CDCA3-212ENST00000604599 MPSTP25325 297 aa12.73□□□□□ -0.37
CDCA3-212ENST00000604599 CNTFP26441 200 aa12.73□□□□□ -0.37
CDCA3-212ENST00000604599 UGT1A3P35503 534 aa12.73□□□□□ -0.37
CDCA3-212ENST00000604599 UGT1A5P35504 534 aa12.73□□□□□ -0.37
CDCA3-212ENST00000604599 CCR10P46092 362 aa12.73□□□□□ -0.37
CDCA3-212ENST00000604599 TFDP2Q14188 446 aa12.73□□□□□ -0.37
CDCA3-212ENST00000604599 LSM12Q3MHD2 195 aaKnown RBP12.73□□□□□ -0.37
CDCA3-212ENST00000604599 ZNF362Q5T0B9 420 aaPredicted RBP12.73□□□□□ -0.37
CDCA3-212ENST00000604599 ACMSDQ8TDX5 336 aa12.73□□□□□ -0.37
CDCA3-212ENST00000604599 ZDHHC15Q96MV8 337 aa12.73□□□□□ -0.37
CDCA3-212ENST00000604599 CCNL1Q9UK58 526 aaPredicted RBP12.73□□□□□ -0.37
CDCA3-212ENST00000604599 NR2E3Q9Y5X4 410 aa12.73□□□□□ -0.37
CDCA3-212ENST00000604599 RGPD3A6NKT7 1758 aaPredicted RBP12.73□□□□□ -0.37
CDCA3-212ENST00000604599 RGPD4Q7Z3J3 1758 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms