RNA–Protein interactions for RNA: ENST00000603837.1

LINC01109-201, Transcript of long intergenic non-protein coding RNA 1109, humanhuman

BASIC

Gene LINC01109, Length 3,081 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01109-201ENST00000603837 A6NL46 340 aa4.85□□□□□ -1.63
LINC01109-201ENST00000603837 CENPBD1B2RD01 187 aa4.85□□□□□ -1.63
LINC01109-201ENST00000603837 ARHGEF15O94989 841 aa4.85□□□□□ -1.63
LINC01109-201ENST00000603837 KRT6AP02538 564 aa4.85□□□□□ -1.63
LINC01109-201ENST00000603837 KRT6BP04259 564 aa4.85□□□□□ -1.63
LINC01109-201ENST00000603837 VEGFAP15692 232 aaPredicted RBP4.85□□□□□ -1.63
LINC01109-201ENST00000603837 RPS6KB1P23443 525 aa4.85□□□□□ -1.63
LINC01109-201ENST00000603837 MMP13P45452 471 aa4.85□□□□□ -1.63
LINC01109-201ENST00000603837 CBX5P45973 191 aa4.85□□□□□ -1.63
LINC01109-201ENST00000603837 CASP7P55210 303 aa4.85□□□□□ -1.63
LINC01109-201ENST00000603837 CD300CQ08708 224 aa4.85□□□□□ -1.63
LINC01109-201ENST00000603837 CUL1Q13616 776 aa4.85□□□□□ -1.63
LINC01109-201ENST00000603837 COTL1Q14019 142 aa4.85□□□□□ -1.63
LINC01109-201ENST00000603837 TOB2Q14106 344 aaPredicted RBP4.85□□□□□ -1.63
LINC01109-201ENST00000603837 MTHFSDQ2M296 383 aaKnown RBP4.85□□□□□ -1.63
LINC01109-201ENST00000603837 RNFT1Q5M7Z0 435 aa4.85□□□□□ -1.63
LINC01109-201ENST00000603837 SAMD5Q5TGI4 173 aa4.85□□□□□ -1.63
LINC01109-201ENST00000603837 RNF43Q68DV7 783 aa4.85□□□□□ -1.63
LINC01109-201ENST00000603837 NFRKBQ6P4R8 1299 aa4.85□□□□□ -1.63
LINC01109-201ENST00000603837 USP51Q70EK9 711 aa4.85□□□□□ -1.63
LINC01109-201ENST00000603837 PIWIL3Q7Z3Z3 882 aaKnown RBP4.85□□□□□ -1.63
LINC01109-201ENST00000603837 ADGRG6Q86SQ4 1221 aa4.85□□□□□ -1.63
LINC01109-201ENST00000603837 TSPYL6Q8N831 410 aa4.85□□□□□ -1.63
LINC01109-201ENST00000603837 SLC4A11Q8NBS3 891 aa4.85□□□□□ -1.63
LINC01109-201ENST00000603837 DENND1AQ8TEH3 1009 aa4.85□□□□□ -1.63
LINC01109-201ENST00000603837 ERLEC1Q96DZ1 483 aa4.85□□□□□ -1.63
LINC01109-201ENST00000603837 CNTNAP3BQ96NU0 1288 aa4.85□□□□□ -1.63
LINC01109-201ENST00000603837 PSMB7Q99436 277 aa4.85□□□□□ -1.63
LINC01109-201ENST00000603837 LBHD1Q9BQE6 289 aaPredicted RBP4.85□□□□□ -1.63
LINC01109-201ENST00000603837 CCDC77Q9BR77 488 aa4.85□□□□□ -1.63
LINC01109-201ENST00000603837 TTLL2Q9BWV7 592 aa4.85□□□□□ -1.63
LINC01109-201ENST00000603837 MRPL1Q9BYD6 325 aaKnown RBP4.85□□□□□ -1.63
LINC01109-201ENST00000603837 FRMD8P1Q9BZ68 369 aaPredicted RBP4.85□□□□□ -1.63
LINC01109-201ENST00000603837 CNTNAP3Q9BZ76 1288 aa4.85□□□□□ -1.63
LINC01109-201ENST00000603837 OSBPL6Q9BZF3 934 aa4.85□□□□□ -1.63
LINC01109-201ENST00000603837 MROH8Q9H579 483 aa4.85□□□□□ -1.63
LINC01109-201ENST00000603837 PRDM5Q9NQX1 630 aaPredicted RBP4.85□□□□□ -1.63
LINC01109-201ENST00000603837 KRT84Q9NSB2 600 aa4.85□□□□□ -1.63
LINC01109-201ENST00000603837 ARMC1Q9NVT9 282 aa4.85□□□□□ -1.63
LINC01109-201ENST00000603837 TBC1D14Q9P2M4 693 aa4.85□□□□□ -1.63
LINC01109-201ENST00000603837 STX18Q9P2W9 335 aaKnown RBP4.85□□□□□ -1.63
LINC01109-201ENST00000603837 PLCH1Q4KWH8 1693 aa4.85□□□□□ -1.63
LINC01109-201ENST00000603837 TCP11X1B4DZS4 312 aa4.85□□□□□ -1.63
LINC01109-201ENST00000603837 PQBP1O60828 265 aaKnown RBP4.85□□□□□ -1.63
LINC01109-201ENST00000603837 MAFO75444 373 aaPredicted RBP4.85□□□□□ -1.63
LINC01109-201ENST00000603837 ERAL1O75616 437 aaKnown RBP4.85□□□□□ -1.63
LINC01109-201ENST00000603837 DCTN3O75935 186 aa4.85□□□□□ -1.63
LINC01109-201ENST00000603837 SCAF4O95104 1147 aaKnown RBP4.85□□□□□ -1.63
LINC01109-201ENST00000603837 EGFRP00533 1210 aa4.85□□□□□ -1.63
LINC01109-201ENST00000603837 HLA-DRAP01903 254 aa4.85□□□□□ -1.63
LINC01109-201ENST00000603837 MAPTP10636 758 aaKnown RBP4.85□□□□□ -1.63
LINC01109-201ENST00000603837 CKBP12277 381 aa4.85□□□□□ -1.63
LINC01109-201ENST00000603837 POLR2CP19387 275 aaPredicted RBP4.85□□□□□ -1.63
LINC01109-201ENST00000603837 SLC5A2P31639 672 aa4.85□□□□□ -1.63
LINC01109-201ENST00000603837 CXCR5P32302 372 aa4.85□□□□□ -1.63
LINC01109-201ENST00000603837 EIF4A3P38919 411 aaKnown RBP4.85□□□□□ -1.63
LINC01109-201ENST00000603837 CPA2P48052 419 aa4.85□□□□□ -1.63
LINC01109-201ENST00000603837 HNRNPFP52597 415 aaKnown RBP4.85□□□□□ -1.63
LINC01109-201ENST00000603837 ZNF135P52742 658 aaPredicted RBP4.85□□□□□ -1.63
LINC01109-201ENST00000603837 MAPK10P53779 464 aa4.85□□□□□ -1.63
LINC01109-201ENST00000603837 VCPP55072 806 aaKnown RBP4.85□□□□□ -1.63
LINC01109-201ENST00000603837 EIF4A1P60842 406 aaKnown RBP4.85□□□□□ -1.63
LINC01109-201ENST00000603837 PSMC6P62333 389 aa4.85□□□□□ -1.63
LINC01109-201ENST00000603837 OLR1P78380 273 aa4.85□□□□□ -1.63
LINC01109-201ENST00000603837 HTRA3P83110 453 aa4.85□□□□□ -1.63
LINC01109-201ENST00000603837 GCNT1Q02742 428 aa4.85□□□□□ -1.63
LINC01109-201ENST00000603837 GALNT1Q10472 559 aaPredicted RBP4.85□□□□□ -1.63
LINC01109-201ENST00000603837 MED21Q13503 144 aa4.85□□□□□ -1.63
LINC01109-201ENST00000603837 ATP1A4Q13733 1029 aa4.85□□□□□ -1.63
LINC01109-201ENST00000603837 GAS6Q14393 721 aa4.85□□□□□ -1.63
LINC01109-201ENST00000603837 GRM2Q14416 872 aa4.85□□□□□ -1.63
LINC01109-201ENST00000603837 SMU1Q2TAY7 513 aa4.85□□□□□ -1.63
LINC01109-201ENST00000603837 NADK2Q4G0N4 442 aa4.85□□□□□ -1.63
LINC01109-201ENST00000603837 DCAF6Q58WW2 860 aa4.85□□□□□ -1.63
LINC01109-201ENST00000603837 NDUFAF5Q5TEU4 345 aa4.85□□□□□ -1.63
LINC01109-201ENST00000603837 PM20D1Q6GTS8 502 aa4.85□□□□□ -1.63
LINC01109-201ENST00000603837 IL27RAQ6UWB1 636 aa4.85□□□□□ -1.63
LINC01109-201ENST00000603837 ZNF852Q6ZMS4 543 aa4.85□□□□□ -1.63
LINC01109-201ENST00000603837 KRT25Q7Z3Z0 450 aa4.85□□□□□ -1.63
LINC01109-201ENST00000603837 CPSF7Q8N684 471 aaKnown RBP4.85□□□□□ -1.63
LINC01109-201ENST00000603837 ZNF671Q8TAW3 534 aa4.85□□□□□ -1.63
LINC01109-201ENST00000603837 GRIN3AQ8TCU5 1115 aa4.85□□□□□ -1.63
LINC01109-201ENST00000603837 PPP4R1Q8TF05 950 aa4.85□□□□□ -1.63
LINC01109-201ENST00000603837 SLC47A1Q96FL8 570 aa4.85□□□□□ -1.63
LINC01109-201ENST00000603837 FAR2Q96K12 515 aa4.85□□□□□ -1.63
LINC01109-201ENST00000603837 ZC3H10Q96K80 434 aaKnown RBP4.85□□□□□ -1.63
LINC01109-201ENST00000603837 CAMK1GQ96NX5 476 aa4.85□□□□□ -1.63
LINC01109-201ENST00000603837 NOX5Q96PH1 765 aa4.85□□□□□ -1.63
LINC01109-201ENST00000603837 LENG8Q96PV6 779 aaPredicted RBP4.85□□□□□ -1.63
LINC01109-201ENST00000603837 ACO2Q99798 780 aaKnown RBP4.85□□□□□ -1.63
LINC01109-201ENST00000603837 NCOR1P1Q9H4R4 102 aa4.85□□□□□ -1.63
LINC01109-201ENST00000603837 EVA1AQ9H8M9 152 aa4.85□□□□□ -1.63
LINC01109-201ENST00000603837 TRMT13Q9NUP7 481 aaKnown RBP4.85□□□□□ -1.63
LINC01109-201ENST00000603837 INTS10Q9NVR2 710 aaKnown RBP4.85□□□□□ -1.63
LINC01109-201ENST00000603837 KLHL9Q9P2J3 617 aa4.85□□□□□ -1.63
LINC01109-201ENST00000603837 PCOLCE2Q9UKZ9 415 aa4.85□□□□□ -1.63
LINC01109-201ENST00000603837 PCDHA5Q9Y5H7 936 aa4.85□□□□□ -1.63
LINC01109-201ENST00000603837 RBM8AQ9Y5S9 174 aaKnown RBP4.85□□□□□ -1.63
LINC01109-201ENST00000603837 CLIC4Q9Y696 253 aa4.85□□□□□ -1.63
LINC01109-201ENST00000603837 UTRNP46939 3433 aa4.85□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms